RNA–Protein interactions for RNA: ENST00000389531.7

SDK1-201, Transcript of sidekick cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SDK1, Length 7,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-201ENST00000389531 MYH16Q9H6N6 1097 aa27.77■■■□□ 2.04
SDK1-201ENST00000389531 PPM1GO15355 546 aaPredicted RBP27.77■■■□□ 2.04
SDK1-201ENST00000389531 ACIN1Q9UKV3 1341 aaKnown RBP27.76■■■□□ 2.04
SDK1-201ENST00000389531 KCNH8Q96L42 1107 aa27.75■■■□□ 2.03
SDK1-201ENST00000389531 NPHP1O15259 732 aa27.72■■■□□ 2.03
SDK1-201ENST00000389531 LMOD2Q6P5Q4 547 aa27.71■■■□□ 2.03
SDK1-201ENST00000389531 CSRNP3Q8WYN3 585 aa27.65■■■□□ 2.02
SDK1-201ENST00000389531 LAS1LQ9Y4W2 734 aaKnown RBP27.65■■■□□ 2.02
SDK1-201ENST00000389531 NCLP19338 710 aaKnown RBP27.64■■■□□ 2.02
SDK1-201ENST00000389531 MRS2Q9HD23 443 aa27.61■■■□□ 2.01
SDK1-201ENST00000389531 RGL3Q3MIN7 710 aa27.58■■■□□ 2.01
SDK1-201ENST00000389531 SCRIBQ14160 1630 aa27.54■■■□□ 2
SDK1-201ENST00000389531 RRP7BPQ9NSQ0 103 aa27.52■■■□□ 2
SDK1-201ENST00000389531 CHMP7Q8WUX9 453 aaPredicted RBP27.51■■□□□ 1.99
SDK1-201ENST00000389531 TSPY4P0CV99 314 aa27.5■■□□□ 1.99
SDK1-201ENST00000389531 TSPY10P0CW01 314 aa27.5■■□□□ 1.99
SDK1-201ENST00000389531 NEUROD2Q15784 382 aa27.46■■□□□ 1.99
SDK1-201ENST00000389531 TNNT2P45379 298 aaPredicted RBP27.44■■□□□ 1.98
SDK1-201ENST00000389531 GLIPR1L2Q4G1C9 344 aa27.42■■□□□ 1.98
SDK1-201ENST00000389531 NAP1L2Q9ULW6 460 aaPredicted RBP27.42■■□□□ 1.98
SDK1-201ENST00000389531 CLSTN1O94985 981 aa27.41■■□□□ 1.98
SDK1-201ENST00000389531 ZRSR1Q15695 479 aaKnown RBP27.38■■□□□ 1.97
SDK1-201ENST00000389531 SOX12O15370 315 aa27.38■■□□□ 1.97
SDK1-201ENST00000389531 AMER1Q5JTC6 1135 aaPredicted RBP27.36■■□□□ 1.97
SDK1-201ENST00000389531 PLCB2Q00722 1185 aa27.35■■□□□ 1.97
SDK1-201ENST00000389531 PTMAP06454 111 aaKnown RBP27.34■■□□□ 1.97
SDK1-201ENST00000389531 TRIM44Q96DX7 344 aaPredicted RBP27.34■■□□□ 1.97
SDK1-201ENST00000389531 DNTTIP2Q5QJE6 756 aaKnown RBP27.32■■□□□ 1.96
SDK1-201ENST00000389531 MTUS2Q5JR59 1369 aa27.29■■□□□ 1.96
SDK1-201ENST00000389531 FTSJ3Q8IY81 847 aaKnown RBP27.29■■□□□ 1.96
SDK1-201ENST00000389531 TRHP20396 242 aaPredicted RBP27.27■■□□□ 1.96
SDK1-201ENST00000389531 ISY1Q9ULR0 285 aaKnown RBP27.27■■□□□ 1.96
SDK1-201ENST00000389531 OS9Q13438 667 aaPredicted RBP27.25■■□□□ 1.95
SDK1-201ENST00000389531 GOLGA2Q08379 1002 aa27.23■■□□□ 1.95
SDK1-201ENST00000389531 CASC1Q6TDU7 716 aa27.22■■□□□ 1.95
SDK1-201ENST00000389531 BECN1Q14457 450 aa27.21■■□□□ 1.95
SDK1-201ENST00000389531 MLECQ14165 292 aa27.21■■□□□ 1.95
SDK1-201ENST00000389531 FRAT1Q92837 279 aaPredicted RBP27.17■■□□□ 1.94
SDK1-201ENST00000389531 MIER1Q8N108 512 aa27.16■■□□□ 1.94
SDK1-201ENST00000389531 FGD1P98174 961 aa27.16■■□□□ 1.94
SDK1-201ENST00000389531 POGKQ9P215 609 aa27.15■■□□□ 1.94
SDK1-201ENST00000389531 GOLGA6L22H0YM25 854 aa27.14■■□□□ 1.94
SDK1-201ENST00000389531 RTN4Q9NQC3 1192 aaKnown RBP27.14■■□□□ 1.93
SDK1-201ENST00000389531 CC2D1BQ5T0F9 858 aaKnown RBP27.13■■□□□ 1.93
SDK1-201ENST00000389531 CFAP53Q96M91 514 aa27.12■■□□□ 1.93
SDK1-201ENST00000389531 EIF4G2P78344 907 aaKnown RBP eCLIP27.11■■□□□ 1.93
SDK1-201ENST00000389531 U2SURPO15042 1029 aaKnown RBP27.1■■□□□ 1.93
SDK1-201ENST00000389531 KNSTRNQ9Y448 316 aa27.1■■□□□ 1.93
SDK1-201ENST00000389531 KCNJ4P48050 445 aa27.09■■□□□ 1.93
SDK1-201ENST00000389531 RGS3P49796 1198 aa27.09■■□□□ 1.93
SDK1-201ENST00000389531 MAPK8IP3Q9UPT6 1336 aa27.07■■□□□ 1.92
SDK1-201ENST00000389531 SAFB2Q14151 953 aaKnown RBP eCLIP27.06■■□□□ 1.92
SDK1-201ENST00000389531 SPRYD3Q8NCJ5 442 aa27.06■■□□□ 1.92
SDK1-201ENST00000389531 DDRGK1Q96HY6 314 aa27.05■■□□□ 1.92
SDK1-201ENST00000389531 ZNF330Q9Y3S2 320 aaPredicted RBP27.01■■□□□ 1.91
SDK1-201ENST00000389531 ZBTB4Q9P1Z0 1013 aaPredicted RBP27■■□□□ 1.91
SDK1-201ENST00000389531 ANO8Q9HCE9 1232 aaPredicted RBP26.98■■□□□ 1.91
SDK1-201ENST00000389531 PLEKHD1A6NEE1 506 aa26.97■■□□□ 1.91
SDK1-201ENST00000389531 HSP90AB1P08238 724 aaKnown RBP26.97■■□□□ 1.91
SDK1-201ENST00000389531 SUPT16HQ9Y5B9 1047 aaKnown RBP26.97■■□□□ 1.91
SDK1-201ENST00000389531 CARD11Q9BXL7 1154 aa26.96■■□□□ 1.91
SDK1-201ENST00000389531 NAP1L5Q96NT1 182 aaPredicted RBP26.95■■□□□ 1.91
SDK1-201ENST00000389531 APBB1O00213 710 aa26.92■■□□□ 1.9
SDK1-201ENST00000389531 PDE4CQ08493 712 aa26.92■■□□□ 1.9
SDK1-201ENST00000389531 ERICH6BQ5W0A0 696 aa26.91■■□□□ 1.9
SDK1-201ENST00000389531 PRM3Q9NNZ6 103 aa26.9■■□□□ 1.9
SDK1-201ENST00000389531 PAK3O75914 559 aaPredicted RBP26.87■■□□□ 1.89
SDK1-201ENST00000389531 CCDC9Q9Y3X0 531 aaKnown RBP26.84■■□□□ 1.89
SDK1-201ENST00000389531 ZCCHC6Q5VYS8 1495 aaKnown RBP26.84■■□□□ 1.89
SDK1-201ENST00000389531 STK26Q9P289 416 aa26.84■■□□□ 1.89
SDK1-201ENST00000389531 CFDP1Q9UEE9 299 aaPredicted RBP26.83■■□□□ 1.89
SDK1-201ENST00000389531 NUDCQ9Y266 331 aa26.82■■□□□ 1.88
SDK1-201ENST00000389531 SRPK2P78362 688 aaKnown RBP26.8■■□□□ 1.88
SDK1-201ENST00000389531 DRC7Q8IY82 874 aa26.78■■□□□ 1.88
SDK1-201ENST00000389531 GOLGA6L6A8MZA4 724 aa26.77■■□□□ 1.88
SDK1-201ENST00000389531 GNL2Q13823 731 aaKnown RBP26.76■■□□□ 1.88
SDK1-201ENST00000389531 GOLGA6L4A6NEF3 574 aa26.75■■□□□ 1.87
SDK1-201ENST00000389531 ARID3AQ99856 593 aa26.73■■□□□ 1.87
SDK1-201ENST00000389531 CDCA8Q53HL2 280 aa26.71■■□□□ 1.87
SDK1-201ENST00000389531 ERCC6Q03468 1493 aa26.71■■□□□ 1.87
SDK1-201ENST00000389531 CSB-PGBD3P0DP91 1061 aa26.7■■□□□ 1.86
SDK1-201ENST00000389531 SIN3AQ96ST3 1273 aa26.68■■□□□ 1.86
SDK1-201ENST00000389531 CLIP1P30622 1438 aa26.67■■□□□ 1.86
SDK1-201ENST00000389531 ANP32EQ9BTT0 268 aa26.66■■□□□ 1.86
SDK1-201ENST00000389531 CHMP3Q9Y3E7 222 aa26.66■■□□□ 1.86
SDK1-201ENST00000389531 B4GALNT3Q6L9W6 998 aa26.65■■□□□ 1.86
SDK1-201ENST00000389531 RTF1Q92541 710 aaKnown RBP26.64■■□□□ 1.85
SDK1-201ENST00000389531 EIF4G1Q04637 1599 aaKnown RBP26.62■■□□□ 1.85
SDK1-201ENST00000389531 DCAF11Q8TEB1 546 aa26.62■■□□□ 1.85
SDK1-201ENST00000389531 RSF1Q96T23 1441 aaPredicted RBP26.59■■□□□ 1.85
SDK1-201ENST00000389531 GGT6Q6P531 493 aa26.57■■□□□ 1.84
SDK1-201ENST00000389531 G3V3G9 751 aa26.56■■□□□ 1.84
SDK1-201ENST00000389531 DCAF8Q5TAQ9 597 aa26.56■■□□□ 1.84
SDK1-201ENST00000389531 HSCBQ8IWL3 235 aa26.56■■□□□ 1.84
SDK1-201ENST00000389531 CREBRFQ8IUR6 639 aa26.56■■□□□ 1.84
SDK1-201ENST00000389531 NOC3LQ8WTT2 800 aaKnown RBP26.55■■□□□ 1.84
SDK1-201ENST00000389531 MORC1Q86VD1 984 aa26.54■■□□□ 1.84
SDK1-201ENST00000389531 TMX4Q9H1E5 349 aaPredicted RBP26.53■■□□□ 1.84
SDK1-201ENST00000389531 HSP90B1P14625 803 aaKnown RBP26.53■■□□□ 1.84
SDK1-201ENST00000389531 FBXO3Q9UK99 471 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms