RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 TSPYL2Q9H2G4 693 aaPredicted RBP8.91□□□□□ -0.98
RNU6-39P-201ENST00000384344 PKD2Q13563 968 aa8.9□□□□□ -0.98
RNU6-39P-201ENST00000384344 CD44P16070 742 aaKnown RBP8.88□□□□□ -0.99
RNU6-39P-201ENST00000384344 HAX1O00165 279 aa8.85□□□□□ -0.99
RNU6-39P-201ENST00000384344 DCAF8L2P0C7V8 631 aa8.85□□□□□ -0.99
RNU6-39P-201ENST00000384344 ZRANB1Q9UGI0 708 aa8.85□□□□□ -0.99
RNU6-39P-201ENST00000384344 C19orf67A6NJJ6 358 aa8.83□□□□□ -1
RNU6-39P-201ENST00000384344 CHRM1P11229 460 aaPredicted RBP8.83□□□□□ -1
RNU6-39P-201ENST00000384344 TAOK2Q9UL54 1235 aa8.83□□□□□ -1
RNU6-39P-201ENST00000384344 PYGBP11216 843 aa8.81□□□□□ -1
RNU6-39P-201ENST00000384344 CCDC61Q9Y6R9 512 aa8.8□□□□□ -1
RNU6-39P-201ENST00000384344 RIOK3O14730 519 aaKnown RBP8.77□□□□□ -1.01
RNU6-39P-201ENST00000384344 ZNF467Q7Z7K2 595 aaPredicted RBP8.77□□□□□ -1.01
RNU6-39P-201ENST00000384344 RGL2O15211 777 aa8.76□□□□□ -1.01
RNU6-39P-201ENST00000384344 ZNF579Q8NAF0 562 aaKnown RBP8.76□□□□□ -1.01
RNU6-39P-201ENST00000384344 CLCN6P51797 869 aa8.74□□□□□ -1.01
RNU6-39P-201ENST00000384344 SGIP1Q9BQI5 828 aa8.74□□□□□ -1.01
RNU6-39P-201ENST00000384344 PCDHB13Q9Y5F0 798 aa8.74□□□□□ -1.01
RNU6-39P-201ENST00000384344 VGFO15240 615 aaPredicted RBP8.72□□□□□ -1.01
RNU6-39P-201ENST00000384344 KIF12Q96FN5 646 aa8.72□□□□□ -1.01
RNU6-39P-201ENST00000384344 PHF12Q96QT6 1004 aa8.72□□□□□ -1.01
RNU6-39P-201ENST00000384344 MAP3K13O43283 966 aa8.7□□□□□ -1.02
RNU6-39P-201ENST00000384344 RNF25Q96BH1 459 aaPredicted RBP8.69□□□□□ -1.02
RNU6-39P-201ENST00000384344 PDAP1Q13442 181 aaKnown RBP8.68□□□□□ -1.02
RNU6-39P-201ENST00000384344 CHGAP10645 457 aaKnown RBP8.67□□□□□ -1.02
RNU6-39P-201ENST00000384344 PCDHB8Q9UN66 801 aa8.66□□□□□ -1.02
RNU6-39P-201ENST00000384344 STK25O00506 426 aa8.65□□□□□ -1.02
RNU6-39P-201ENST00000384344 IFNL1Q8IU54 200 aa8.65□□□□□ -1.02
RNU6-39P-201ENST00000384344 PSEN1P49768 467 aa8.63□□□□□ -1.03
RNU6-39P-201ENST00000384344 EVX2Q03828 476 aa8.63□□□□□ -1.03
RNU6-39P-201ENST00000384344 MS4A3Q96HJ5 214 aa8.63□□□□□ -1.03
RNU6-39P-201ENST00000384344 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.62□□□□□ -1.03
RNU6-39P-201ENST00000384344 HS6ST3Q8IZP7 471 aa8.62□□□□□ -1.03
RNU6-39P-201ENST00000384344 ZFP91Q96JP5 570 aaPredicted RBP8.62□□□□□ -1.03
RNU6-39P-201ENST00000384344 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.62□□□□□ -1.03
RNU6-39P-201ENST00000384344 BCL11BQ9C0K0 894 aaPredicted RBP8.61□□□□□ -1.03
RNU6-39P-201ENST00000384344 STK24Q9Y6E0 443 aa8.61□□□□□ -1.03
RNU6-39P-201ENST00000384344 BBXQ8WY36 941 aaPredicted RBP8.59□□□□□ -1.03
RNU6-39P-201ENST00000384344 GOLGA2Q08379 1002 aa8.58□□□□□ -1.04
RNU6-39P-201ENST00000384344 GALR2O43603 387 aaPredicted RBP8.57□□□□□ -1.04
RNU6-39P-201ENST00000384344 TIE1P35590 1138 aa8.57□□□□□ -1.04
RNU6-39P-201ENST00000384344 TMEM106CQ9BVX2 250 aa8.57□□□□□ -1.04
RNU6-39P-201ENST00000384344 GABBR2O75899 941 aa8.56□□□□□ -1.04
RNU6-39P-201ENST00000384344 RYDENQ9NUL5 291 aaKnown RBP8.55□□□□□ -1.04
RNU6-39P-201ENST00000384344 DCBLD2Q96PD2 775 aa8.54□□□□□ -1.04
RNU6-39P-201ENST00000384344 PLSCR2Q9NRY7 297 aa8.54□□□□□ -1.04
RNU6-39P-201ENST00000384344 DNAJC5Q9H3Z4 198 aa8.53□□□□□ -1.04
RNU6-39P-201ENST00000384344 CABP2Q9NPB3 220 aa8.52□□□□□ -1.05
RNU6-39P-201ENST00000384344 TTLL13PA6NNM8 815 aa8.5□□□□□ -1.05
RNU6-39P-201ENST00000384344 MKRN3Q13064 507 aaKnown RBP8.5□□□□□ -1.05
RNU6-39P-201ENST00000384344 BMP2KQ9NSY1 1161 aaPredicted RBP8.5□□□□□ -1.05
RNU6-39P-201ENST00000384344 TRPC6Q9Y210 931 aa8.5□□□□□ -1.05
RNU6-39P-201ENST00000384344 LHX8Q68G74 356 aa8.49□□□□□ -1.05
RNU6-39P-201ENST00000384344 SPRYD3Q8NCJ5 442 aa8.49□□□□□ -1.05
RNU6-39P-201ENST00000384344 SOX12O15370 315 aa8.47□□□□□ -1.05
RNU6-39P-201ENST00000384344 PAXIP1Q6ZW49 1069 aaPredicted RBP8.47□□□□□ -1.05
RNU6-39P-201ENST00000384344 CFAP44Q96MT7 982 aa8.47□□□□□ -1.05
RNU6-39P-201ENST00000384344 PLCB2Q00722 1185 aa8.46□□□□□ -1.06
RNU6-39P-201ENST00000384344 ASTLQ6HA08 431 aaPredicted RBP8.46□□□□□ -1.06
RNU6-39P-201ENST00000384344 TRIM35Q9UPQ4 493 aa8.46□□□□□ -1.06
RNU6-39P-201ENST00000384344 ATMINO43313 823 aaPredicted RBP8.45□□□□□ -1.06
RNU6-39P-201ENST00000384344 EFCAB3Q8N7B9 438 aa8.45□□□□□ -1.06
RNU6-39P-201ENST00000384344 NLRP6P59044 892 aa8.44□□□□□ -1.06
RNU6-39P-201ENST00000384344 ATN1P54259 1190 aaPredicted RBP8.43□□□□□ -1.06
RNU6-39P-201ENST00000384344 NKX1-1Q15270 411 aaPredicted RBP8.42□□□□□ -1.06
RNU6-39P-201ENST00000384344 IER5LQ5T953 404 aa8.42□□□□□ -1.06
RNU6-39P-201ENST00000384344 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.4□□□□□ -1.06
RNU6-39P-201ENST00000384344 SLC39A7Q92504 469 aa8.39□□□□□ -1.07
RNU6-39P-201ENST00000384344 GTPBP6O43824 516 aaPredicted RBP8.38□□□□□ -1.07
RNU6-39P-201ENST00000384344 SLC24A1O60721 1099 aa8.38□□□□□ -1.07
RNU6-39P-201ENST00000384344 MFRPQ9BY79 579 aa8.38□□□□□ -1.07
RNU6-39P-201ENST00000384344 PHF8Q9UPP1 1060 aa8.38□□□□□ -1.07
RNU6-39P-201ENST00000384344 SEC24BO95487 1268 aa8.37□□□□□ -1.07
RNU6-39P-201ENST00000384344 PLCG2P16885 1265 aa8.37□□□□□ -1.07
RNU6-39P-201ENST00000384344 HAP1P54257 671 aaPredicted RBP8.37□□□□□ -1.07
RNU6-39P-201ENST00000384344 C7P10643 843 aa8.36□□□□□ -1.07
RNU6-39P-201ENST00000384344 G3V3G9 751 aa8.35□□□□□ -1.07
RNU6-39P-201ENST00000384344 OCEL1Q9H607 264 aa8.35□□□□□ -1.07
RNU6-39P-201ENST00000384344 FBXO22Q8NEZ5 403 aa8.34□□□□□ -1.07
RNU6-39P-201ENST00000384344 METRNQ9UJH8 293 aa8.33□□□□□ -1.08
RNU6-39P-201ENST00000384344 IRX5P78411 483 aaPredicted RBP8.31□□□□□ -1.08
RNU6-39P-201ENST00000384344 PELP1Q8IZL8 1130 aaKnown RBP8.31□□□□□ -1.08
RNU6-39P-201ENST00000384344 POTEIP0CG38 1075 aa8.3□□□□□ -1.08
RNU6-39P-201ENST00000384344 ILDR1Q86SU0 546 aaPredicted RBP8.3□□□□□ -1.08
RNU6-39P-201ENST00000384344 L3MBTL3Q96JM7 780 aaPredicted RBP8.29□□□□□ -1.08
RNU6-39P-201ENST00000384344 MS4A4AQ96JQ5 239 aa8.28□□□□□ -1.08
RNU6-39P-201ENST00000384344 PDCD7Q8N8D1 485 aaKnown RBP8.27□□□□□ -1.09
RNU6-39P-201ENST00000384344 TSHZ2Q9NRE2 1034 aa8.25□□□□□ -1.09
RNU6-39P-201ENST00000384344 PPP1R37O75864 691 aa8.24□□□□□ -1.09
RNU6-39P-201ENST00000384344 VSIG10Q8N0Z9 540 aa8.24□□□□□ -1.09
RNU6-39P-201ENST00000384344 COLQQ9Y215 455 aaPredicted RBP8.24□□□□□ -1.09
RNU6-39P-201ENST00000384344 BOLA1Q9Y3E2 137 aa8.24□□□□□ -1.09
RNU6-39P-201ENST00000384344 DPY19L2Q6NUT2 758 aa8.23□□□□□ -1.09
RNU6-39P-201ENST00000384344 MICALL2Q8IY33 904 aa8.21□□□□□ -1.1
RNU6-39P-201ENST00000384344 C3orf67Q6ZVT6 689 aa8.2□□□□□ -1.1
RNU6-39P-201ENST00000384344 WDR70Q9NW82 654 aa8.19□□□□□ -1.1
RNU6-39P-201ENST00000384344 PDE4AP27815 886 aa8.18□□□□□ -1.1
RNU6-39P-201ENST00000384344 POTEFA5A3E0 1075 aa8.17□□□□□ -1.1
RNU6-39P-201ENST00000384344 TMEM121BQ9BXQ6 578 aaPredicted RBP8.17□□□□□ -1.1
RNU6-39P-201ENST00000384344 MAMSTRQ6ZN01 415 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms