RNA–Protein interactions for RNA: ENST00000383703.3

LRIG1-202, Transcript of leucine rich repeats and immunoglobulin like domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRIG1, Length 5,283 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG1-202ENST00000383703 STAG3Q9UJ98 1225 aa30.53■■■□□ 2.48
LRIG1-202ENST00000383703 SALL2Q9Y467 1007 aaPredicted RBP30.53■■■□□ 2.48
LRIG1-202ENST00000383703 EIF4G2P78344 907 aaKnown RBP eCLIP30.49■■■□□ 2.47
LRIG1-202ENST00000383703 SCAF1Q9H7N4 1312 aaKnown RBP30.48■■■□□ 2.47
LRIG1-202ENST00000383703 PLEKHD1A6NEE1 506 aa30.38■■■□□ 2.45
LRIG1-202ENST00000383703 SOGA1O94964 1423 aa30.38■■■□□ 2.45
LRIG1-202ENST00000383703 CCDC136Q96JN2 1154 aa30.35■■■□□ 2.45
LRIG1-202ENST00000383703 WDR43Q15061 677 aaKnown RBP eCLIP30.33■■■□□ 2.45
LRIG1-202ENST00000383703 MROH2BQ7Z745 1585 aa30.32■■■□□ 2.44
LRIG1-202ENST00000383703 KCNH8Q96L42 1107 aa30.27■■■□□ 2.44
LRIG1-202ENST00000383703 CFDP1Q9UEE9 299 aaPredicted RBP30.26■■■□□ 2.43
LRIG1-202ENST00000383703 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.24■■■□□ 2.43
LRIG1-202ENST00000383703 IRX6P78412 446 aaPredicted RBP30.23■■■□□ 2.43
LRIG1-202ENST00000383703 CCDC88BA6NC98 1476 aa30.22■■■□□ 2.43
LRIG1-202ENST00000383703 PLPPR3Q6T4P5 718 aa30.2■■■□□ 2.42
LRIG1-202ENST00000383703 SIN3AQ96ST3 1273 aa30.17■■■□□ 2.42
LRIG1-202ENST00000383703 CCNB3Q8WWL7 1395 aa30.17■■■□□ 2.42
LRIG1-202ENST00000383703 CARMIL1Q5VZK9 1371 aa30.17■■■□□ 2.42
LRIG1-202ENST00000383703 UPF2Q9HAU5 1272 aaKnown RBP30.16■■■□□ 2.42
LRIG1-202ENST00000383703 CUX2O14529 1486 aa30.16■■■□□ 2.42
LRIG1-202ENST00000383703 FHAD1B1AJZ9 1412 aa30.15■■■□□ 2.42
LRIG1-202ENST00000383703 RGL3Q3MIN7 710 aa30.15■■■□□ 2.42
LRIG1-202ENST00000383703 ABCC8Q09428 1581 aa30.14■■■□□ 2.41
LRIG1-202ENST00000383703 VPS8Q8N3P4 1428 aa30.06■■■□□ 2.4
LRIG1-202ENST00000383703 HSP90AA1P07900 732 aaKnown RBP30.04■■■□□ 2.4
LRIG1-202ENST00000383703 CARD11Q9BXL7 1154 aa30.01■■■□□ 2.39
LRIG1-202ENST00000383703 ERCC6Q03468 1493 aa29.95■■■□□ 2.38
LRIG1-202ENST00000383703 SMARCA2P51531 1590 aa29.94■■■□□ 2.38
LRIG1-202ENST00000383703 EIF4G1Q04637 1599 aaKnown RBP29.92■■■□□ 2.38
LRIG1-202ENST00000383703 SENP3Q9H4L4 574 aaPredicted RBP29.92■■■□□ 2.38
LRIG1-202ENST00000383703 WIZO95785 1651 aa29.9■■■□□ 2.38
LRIG1-202ENST00000383703 KANK4Q5T7N3 995 aaPredicted RBP29.89■■■□□ 2.38
LRIG1-202ENST00000383703 CDCA8Q53HL2 280 aa29.89■■■□□ 2.38
LRIG1-202ENST00000383703 TOP2AP11388 1531 aaKnown RBP29.88■■■□□ 2.37
LRIG1-202ENST00000383703 SENP3-EIF4A1A0A087X0R7 540 aa29.88■■■□□ 2.37
LRIG1-202ENST00000383703 NBR1Q14596 966 aa29.87■■■□□ 2.37
LRIG1-202ENST00000383703 KNSTRNQ9Y448 316 aa29.87■■■□□ 2.37
LRIG1-202ENST00000383703 SUPT16HQ9Y5B9 1047 aaKnown RBP29.87■■■□□ 2.37
LRIG1-202ENST00000383703 TIMELESSQ9UNS1 1208 aa29.85■■■□□ 2.37
LRIG1-202ENST00000383703 SETD5Q9C0A6 1442 aa29.84■■■□□ 2.37
LRIG1-202ENST00000383703 PPP1R15AO75807 674 aaPredicted RBP29.83■■■□□ 2.37
LRIG1-202ENST00000383703 ARHGAP35Q9NRY4 1499 aa29.8■■■□□ 2.36
LRIG1-202ENST00000383703 ANP32BQ92688 251 aaKnown RBP29.8■■■□□ 2.36
LRIG1-202ENST00000383703 CFAP53Q96M91 514 aa29.74■■■□□ 2.35
LRIG1-202ENST00000383703 MYH16Q9H6N6 1097 aa29.71■■■□□ 2.35
LRIG1-202ENST00000383703 DCAF11Q8TEB1 546 aa29.66■■■□□ 2.34
LRIG1-202ENST00000383703 TDRD9Q8NDG6 1382 aaKnown RBP29.63■■■□□ 2.33
LRIG1-202ENST00000383703 RAB3GAP2Q9H2M9 1393 aa29.63■■■□□ 2.33
LRIG1-202ENST00000383703 PDS5BQ9NTI5 1447 aa29.62■■■□□ 2.33
LRIG1-202ENST00000383703 FMN1Q68DA7 1419 aa29.61■■■□□ 2.33
LRIG1-202ENST00000383703 PPP4R2Q9NY27 417 aa29.6■■■□□ 2.33
LRIG1-202ENST00000383703 CC2D1BQ5T0F9 858 aaKnown RBP29.58■■■□□ 2.33
LRIG1-202ENST00000383703 CCER2I3L3R5 266 aa29.58■■■□□ 2.33
LRIG1-202ENST00000383703 HSPA5P11021 654 aaKnown RBP29.58■■■□□ 2.33
LRIG1-202ENST00000383703 DDRGK1Q96HY6 314 aa29.57■■■□□ 2.32
LRIG1-202ENST00000383703 C14orf37Q86TY3 774 aa29.56■■■□□ 2.32
LRIG1-202ENST00000383703 NEUROD2Q15784 382 aa29.55■■■□□ 2.32
LRIG1-202ENST00000383703 PPM1GO15355 546 aaPredicted RBP29.54■■■□□ 2.32
LRIG1-202ENST00000383703 TMF1P82094 1093 aa29.53■■■□□ 2.32
LRIG1-202ENST00000383703 ZBTB7CA1YPR0 619 aa29.52■■■□□ 2.32
LRIG1-202ENST00000383703 FOXD1Q16676 465 aa29.52■■■□□ 2.32
LRIG1-202ENST00000383703 RAPGEF2Q9Y4G8 1499 aa29.52■■■□□ 2.32
LRIG1-202ENST00000383703 PKD2Q13563 968 aa29.51■■■□□ 2.32
LRIG1-202ENST00000383703 ARID4BQ4LE39 1312 aaPredicted RBP29.51■■■□□ 2.31
LRIG1-202ENST00000383703 ARXQ96QS3 562 aa29.51■■■□□ 2.31
LRIG1-202ENST00000383703 CADPSQ9ULU8 1353 aa29.5■■■□□ 2.31
LRIG1-202ENST00000383703 ATAD2BQ9ULI0 1458 aa29.5■■■□□ 2.31
LRIG1-202ENST00000383703 BECN1Q14457 450 aa29.5■■■□□ 2.31
LRIG1-202ENST00000383703 SMARCA4P51532 1647 aa29.49■■■□□ 2.31
LRIG1-202ENST00000383703 POGKQ9P215 609 aa29.49■■■□□ 2.31
LRIG1-202ENST00000383703 CARMIL2Q6F5E8 1435 aa29.49■■■□□ 2.31
LRIG1-202ENST00000383703 PLEKHG5O94827 1062 aa29.48■■■□□ 2.31
LRIG1-202ENST00000383703 EIF5BO60841 1220 aaKnown RBP29.48■■■□□ 2.31
LRIG1-202ENST00000383703 KANK1Q14678 1352 aa29.47■■■□□ 2.31
LRIG1-202ENST00000383703 MAPK8IP3Q9UPT6 1336 aa29.46■■■□□ 2.31
LRIG1-202ENST00000383703 NUDCQ9Y266 331 aa29.46■■■□□ 2.31
LRIG1-202ENST00000383703 TNNT2P45379 298 aaPredicted RBP29.45■■■□□ 2.31
LRIG1-202ENST00000383703 MPHOSPH9Q99550 1183 aa29.45■■■□□ 2.31
LRIG1-202ENST00000383703 FTSJ3Q8IY81 847 aaKnown RBP29.45■■■□□ 2.3
LRIG1-202ENST00000383703 FHOD3Q2V2M9 1422 aa29.43■■■□□ 2.3
LRIG1-202ENST00000383703 RUSC2Q8N2Y8 1516 aa29.4■■■□□ 2.3
LRIG1-202ENST00000383703 B4GALNT3Q6L9W6 998 aa29.39■■■□□ 2.29
LRIG1-202ENST00000383703 FRAT1Q92837 279 aaPredicted RBP29.36■■■□□ 2.29
LRIG1-202ENST00000383703 LAS1LQ9Y4W2 734 aaKnown RBP29.36■■■□□ 2.29
LRIG1-202ENST00000383703 ANP32EQ9BTT0 268 aa29.33■■■□□ 2.29
LRIG1-202ENST00000383703 NUP155O75694 1391 aa29.33■■■□□ 2.29
LRIG1-202ENST00000383703 ANKRD30AQ9BXX3 1397 aa29.32■■■□□ 2.28
LRIG1-202ENST00000383703 RGS3P49796 1198 aa29.31■■■□□ 2.28
LRIG1-202ENST00000383703 U2SURPO15042 1029 aaKnown RBP29.3■■■□□ 2.28
LRIG1-202ENST00000383703 KTN1Q86UP2 1357 aaKnown RBP29.24■■■□□ 2.27
LRIG1-202ENST00000383703 A0A0G2JS52 829 aa29.24■■■□□ 2.27
LRIG1-202ENST00000383703 ROCK2O75116 1388 aaKnown RBP29.22■■■□□ 2.27
LRIG1-202ENST00000383703 L3MBTL2Q969R5 705 aa29.22■■■□□ 2.27
LRIG1-202ENST00000383703 EFCAB2Q5VUJ9 269 aa29.22■■■□□ 2.27
LRIG1-202ENST00000383703 GGT6Q6P531 493 aa29.21■■■□□ 2.27
LRIG1-202ENST00000383703 MORC1Q86VD1 984 aa29.21■■■□□ 2.27
LRIG1-202ENST00000383703 SRPK2P78362 688 aaKnown RBP29.19■■■□□ 2.26
LRIG1-202ENST00000383703 MS4A1P11836 297 aa29.19■■■□□ 2.26
LRIG1-202ENST00000383703 DHX57Q6P158 1386 aaKnown RBP29.19■■■□□ 2.26
LRIG1-202ENST00000383703 PNNQ9H307 717 aaKnown RBP29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms