RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 NPM2Q86SE8 214 aaKnown RBP12.75□□□□□ -0.37
VLDLR-203ENST00000382100 KIAA2012Q0VF49 1180 aa12.75□□□□□ -0.37
VLDLR-203ENST00000382100 MSNP26038 577 aaKnown RBP12.74□□□□□ -0.37
VLDLR-203ENST00000382100 ITGAEP38570 1179 aa12.73□□□□□ -0.37
VLDLR-203ENST00000382100 TIMELESSQ9UNS1 1208 aa12.73□□□□□ -0.37
VLDLR-203ENST00000382100 HDAC5Q9UQL6 1122 aa12.72□□□□□ -0.37
VLDLR-203ENST00000382100 WDR43Q15061 677 aaKnown RBP eCLIP12.72□□□□□ -0.37
VLDLR-203ENST00000382100 PHF14O94880 888 aa12.71□□□□□ -0.37
VLDLR-203ENST00000382100 TMC1Q8TDI8 760 aa12.71□□□□□ -0.38
VLDLR-203ENST00000382100 TNNT3P45378 269 aaPredicted RBP12.69□□□□□ -0.38
VLDLR-203ENST00000382100 EIF4G2P78344 907 aaKnown RBP eCLIP12.68□□□□□ -0.38
VLDLR-203ENST00000382100 CSPP1Q1MSJ5 1256 aa12.67□□□□□ -0.38
VLDLR-203ENST00000382100 RSF1Q96T23 1441 aaPredicted RBP12.67□□□□□ -0.38
VLDLR-203ENST00000382100 CFAP53Q96M91 514 aa12.67□□□□□ -0.38
VLDLR-203ENST00000382100 MCCP23508 829 aa12.66□□□□□ -0.38
VLDLR-203ENST00000382100 RSPH6AQ9H0K4 717 aa12.66□□□□□ -0.38
VLDLR-203ENST00000382100 ESF1Q9H501 851 aaKnown RBP12.66□□□□□ -0.38
VLDLR-203ENST00000382100 GPS2Q13227 327 aa12.66□□□□□ -0.38
VLDLR-203ENST00000382100 HNRNPUQ00839 825 aaKnown RBP eCLIP12.65□□□□□ -0.38
VLDLR-203ENST00000382100 GBP4Q96PP9 640 aa12.65□□□□□ -0.38
VLDLR-203ENST00000382100 DHX8Q14562 1220 aaKnown RBP12.63□□□□□ -0.39
VLDLR-203ENST00000382100 KIF3AQ9Y496 699 aa12.63□□□□□ -0.39
VLDLR-203ENST00000382100 MAP7D2Q96T17 732 aa12.63□□□□□ -0.39
VLDLR-203ENST00000382100 TPM4P67936 248 aa12.61□□□□□ -0.39
VLDLR-203ENST00000382100 PHLDB1Q86UU1 1377 aa12.61□□□□□ -0.39
VLDLR-203ENST00000382100 NAP1L5Q96NT1 182 aaPredicted RBP12.61□□□□□ -0.39
VLDLR-203ENST00000382100 FKBP8Q14318 412 aa12.6□□□□□ -0.39
VLDLR-203ENST00000382100 HMMRO75330 724 aa12.59□□□□□ -0.39
VLDLR-203ENST00000382100 NOM1Q5C9Z4 860 aaKnown RBP12.57□□□□□ -0.4
VLDLR-203ENST00000382100 CCDC70Q6NSX1 233 aa12.57□□□□□ -0.4
VLDLR-203ENST00000382100 CNGB1Q14028 1251 aaPredicted RBP12.56□□□□□ -0.4
VLDLR-203ENST00000382100 WWC1Q8IX03 1113 aa12.56□□□□□ -0.4
VLDLR-203ENST00000382100 CALD1Q05682 793 aaKnown RBP12.55□□□□□ -0.4
VLDLR-203ENST00000382100 PKNOX2Q96KN3 472 aa12.55□□□□□ -0.4
VLDLR-203ENST00000382100 NOP58Q9Y2X3 529 aaKnown RBP12.55□□□□□ -0.4
VLDLR-203ENST00000382100 HSCBQ8IWL3 235 aa12.55□□□□□ -0.4
VLDLR-203ENST00000382100 CAGE1Q8TC20 777 aa12.55□□□□□ -0.4
VLDLR-203ENST00000382100 BCANQ96GW7 911 aa12.55□□□□□ -0.4
VLDLR-203ENST00000382100 CDR1P51861 262 aa12.54□□□□□ -0.4
VLDLR-203ENST00000382100 KAT6BQ8WYB5 2073 aa12.54□□□□□ -0.4
VLDLR-203ENST00000382100 ATP6V1DQ9Y5K8 247 aa12.54□□□□□ -0.4
VLDLR-203ENST00000382100 CEP162Q5TB80 1403 aa12.54□□□□□ -0.4
VLDLR-203ENST00000382100 PPP4R2Q9NY27 417 aa12.53□□□□□ -0.4
VLDLR-203ENST00000382100 HMGB1P1B2RPK0 211 aaPredicted RBP12.52□□□□□ -0.4
VLDLR-203ENST00000382100 FTSJ3Q8IY81 847 aaKnown RBP12.52□□□□□ -0.41
VLDLR-203ENST00000382100 MRS2Q9HD23 443 aa12.52□□□□□ -0.41
VLDLR-203ENST00000382100 HMGB1P09429 215 aaKnown RBP12.52□□□□□ -0.41
VLDLR-203ENST00000382100 CSRNP3Q8WYN3 585 aa12.52□□□□□ -0.41
VLDLR-203ENST00000382100 NGEFQ8N5V2 710 aa12.51□□□□□ -0.41
VLDLR-203ENST00000382100 TAF3Q5VWG9 929 aa12.51□□□□□ -0.41
VLDLR-203ENST00000382100 GON4LQ3T8J9 2241 aa12.5□□□□□ -0.41
VLDLR-203ENST00000382100 NOC3LQ8WTT2 800 aaKnown RBP12.49□□□□□ -0.41
VLDLR-203ENST00000382100 TEX35Q5T0J7 233 aa12.49□□□□□ -0.41
VLDLR-203ENST00000382100 AAMPQ13685 434 aa12.49□□□□□ -0.41
VLDLR-203ENST00000382100 NUDCQ9Y266 331 aa12.49□□□□□ -0.41
VLDLR-203ENST00000382100 SKOR2Q2VWA4 1001 aaPredicted RBP12.48□□□□□ -0.41
VLDLR-203ENST00000382100 ACBD3Q9H3P7 528 aa12.48□□□□□ -0.41
VLDLR-203ENST00000382100 TPM3P06753 285 aa12.47□□□□□ -0.41
VLDLR-203ENST00000382100 CWC15Q9P013 229 aaKnown RBP12.46□□□□□ -0.41
VLDLR-203ENST00000382100 ISY1Q9ULR0 285 aaKnown RBP12.46□□□□□ -0.42
VLDLR-203ENST00000382100 NBR1Q14596 966 aa12.45□□□□□ -0.42
VLDLR-203ENST00000382100 DCTN1Q14203 1278 aa12.45□□□□□ -0.42
VLDLR-203ENST00000382100 DDX11L8A8MPP1 907 aa12.45□□□□□ -0.42
VLDLR-203ENST00000382100 FHAD1B1AJZ9 1412 aa12.44□□□□□ -0.42
VLDLR-203ENST00000382100 IPO8O15397 1037 aaKnown RBP12.44□□□□□ -0.42
VLDLR-203ENST00000382100 RDXP35241 583 aaKnown RBP12.44□□□□□ -0.42
VLDLR-203ENST00000382100 TSPY4P0CV99 314 aa12.43□□□□□ -0.42
VLDLR-203ENST00000382100 TSPY10P0CW01 314 aa12.43□□□□□ -0.42
VLDLR-203ENST00000382100 FGD1P98174 961 aa12.43□□□□□ -0.42
VLDLR-203ENST00000382100 ROCK2O75116 1388 aaKnown RBP12.43□□□□□ -0.42
VLDLR-203ENST00000382100 CCER2I3L3R5 266 aa12.42□□□□□ -0.42
VLDLR-203ENST00000382100 BCL11AQ9H165 835 aa12.42□□□□□ -0.42
VLDLR-203ENST00000382100 KNSTRNQ9Y448 316 aa12.42□□□□□ -0.42
VLDLR-203ENST00000382100 CAVIN1Q6NZI2 390 aaKnown RBP12.42□□□□□ -0.42
VLDLR-203ENST00000382100 HSP90B1P14625 803 aaKnown RBP12.42□□□□□ -0.42
VLDLR-203ENST00000382100 TCERG1O14776 1098 aaKnown RBP12.42□□□□□ -0.42
VLDLR-203ENST00000382100 CCDC66A2RUB6 948 aa12.41□□□□□ -0.42
VLDLR-203ENST00000382100 HSP90AB1P08238 724 aaKnown RBP12.41□□□□□ -0.42
VLDLR-203ENST00000382100 TPM1P09493 284 aa12.41□□□□□ -0.42
VLDLR-203ENST00000382100 HMGB3O15347 200 aaKnown RBP12.4□□□□□ -0.42
VLDLR-203ENST00000382100 MTUS2Q5JR59 1369 aa12.39□□□□□ -0.43
VLDLR-203ENST00000382100 PDIA4P13667 645 aaKnown RBP12.39□□□□□ -0.43
VLDLR-203ENST00000382100 USP8P40818 1118 aa12.39□□□□□ -0.43
VLDLR-203ENST00000382100 HSP90AA2PQ14568 343 aaPredicted RBP12.38□□□□□ -0.43
VLDLR-203ENST00000382100 STAG3Q9UJ98 1225 aa12.38□□□□□ -0.43
VLDLR-203ENST00000382100 LRRFIP1Q32MZ4 808 aaKnown RBP12.38□□□□□ -0.43
VLDLR-203ENST00000382100 TSPYL1Q9H0U9 437 aa12.38□□□□□ -0.43
VLDLR-203ENST00000382100 CEP89Q96ST8 783 aa12.37□□□□□ -0.43
VLDLR-203ENST00000382100 MYO6Q9UM54 1294 aa12.37□□□□□ -0.43
VLDLR-203ENST00000382100 RRP12Q5JTH9 1297 aaKnown RBP12.37□□□□□ -0.43
VLDLR-203ENST00000382100 KIAA1211Q6ZU35 1233 aa12.37□□□□□ -0.43
VLDLR-203ENST00000382100 MAPK8IP3Q9UPT6 1336 aa12.37□□□□□ -0.43
VLDLR-203ENST00000382100 IPO7O95373 1038 aaKnown RBP12.37□□□□□ -0.43
VLDLR-203ENST00000382100 GPATCH3Q96I76 525 aa12.37□□□□□ -0.43
VLDLR-203ENST00000382100 TSR1Q2NL82 804 aaKnown RBP12.37□□□□□ -0.43
VLDLR-203ENST00000382100 IL27Q8NEV9 243 aa12.37□□□□□ -0.43
VLDLR-203ENST00000382100 ARGLU1Q9NWB6 273 aaPredicted RBP12.37□□□□□ -0.43
VLDLR-203ENST00000382100 KIF16BQ96L93 1317 aa12.37□□□□□ -0.43
VLDLR-203ENST00000382100 CCDC191Q8NCU4 936 aa12.36□□□□□ -0.43
VLDLR-203ENST00000382100 GOLGA3Q08378 1498 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms