RNA–Protein interactions for RNA: ENST00000381998.8

MSR1-204, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 1 (best) BASIC

Gene MSR1, Length 2,826 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-204ENST00000381998 UNC13AQ9UPW8 1703 aa9.39□□□□□ -0.91
MSR1-204ENST00000381998 IFNLR1Q8IU57 520 aaPredicted RBP9.38□□□□□ -0.91
MSR1-204ENST00000381998 VASPP50552 380 aaPredicted RBP9.38□□□□□ -0.91
MSR1-204ENST00000381998 TMEM132AQ24JP5 1023 aa9.37□□□□□ -0.91
MSR1-204ENST00000381998 FAM9AQ8IZU1 332 aaPredicted RBP9.37□□□□□ -0.91
MSR1-204ENST00000381998 ZNF692Q9BU19 519 aaPredicted RBP9.37□□□□□ -0.91
MSR1-204ENST00000381998 SMARCA4P51532 1647 aa9.35□□□□□ -0.91
MSR1-204ENST00000381998 ZBTB12Q9Y330 459 aaPredicted RBP9.34□□□□□ -0.91
MSR1-204ENST00000381998 NPM2Q86SE8 214 aaKnown RBP9.33□□□□□ -0.92
MSR1-204ENST00000381998 FBXO3Q9UK99 471 aa9.33□□□□□ -0.92
MSR1-204ENST00000381998 ZEB1P37275 1124 aaPredicted RBP9.32□□□□□ -0.92
MSR1-204ENST00000381998 TOP2AP11388 1531 aaKnown RBP9.32□□□□□ -0.92
MSR1-204ENST00000381998 EIF5BO60841 1220 aaKnown RBP9.32□□□□□ -0.92
MSR1-204ENST00000381998 BICRAQ9NZM4 1560 aa9.32□□□□□ -0.92
MSR1-204ENST00000381998 PABPN1Q86U42 306 aaKnown RBP eCLIP9.31□□□□□ -0.92
MSR1-204ENST00000381998 EIF4G1Q04637 1599 aaKnown RBP9.31□□□□□ -0.92
MSR1-204ENST00000381998 C14orf37Q86TY3 774 aa9.3□□□□□ -0.92
MSR1-204ENST00000381998 CCDC88BA6NC98 1476 aa9.28□□□□□ -0.92
MSR1-204ENST00000381998 SMARCA2P51531 1590 aa9.26□□□□□ -0.93
MSR1-204ENST00000381998 SSUH2Q9Y2M2 353 aa9.26□□□□□ -0.93
MSR1-204ENST00000381998 SPDYE2BA6NHP3 402 aa9.23□□□□□ -0.93
MSR1-204ENST00000381998 SPDYE6P0CI01 402 aa9.23□□□□□ -0.93
MSR1-204ENST00000381998 SPDYE2Q495Y8 402 aa9.23□□□□□ -0.93
MSR1-204ENST00000381998 KDM2AQ9Y2K7 1162 aa9.23□□□□□ -0.93
MSR1-204ENST00000381998 ABCC8Q09428 1581 aa9.2□□□□□ -0.94
MSR1-204ENST00000381998 PEG3Q9GZU2 1588 aa9.2□□□□□ -0.94
MSR1-204ENST00000381998 PKD2Q13563 968 aa9.18□□□□□ -0.94
MSR1-204ENST00000381998 ATAD2BQ9ULI0 1458 aa9.14□□□□□ -0.95
MSR1-204ENST00000381998 PLCD3Q8N3E9 789 aa9.13□□□□□ -0.95
MSR1-204ENST00000381998 MIER1Q8N108 512 aa9.13□□□□□ -0.95
MSR1-204ENST00000381998 SOGA1O94964 1423 aa9.11□□□□□ -0.95
MSR1-204ENST00000381998 CCER1Q8TC90 406 aaPredicted RBP9.1□□□□□ -0.95
MSR1-204ENST00000381998 BAZ1BQ9UIG0 1483 aaKnown RBP9.1□□□□□ -0.95
MSR1-204ENST00000381998 RUSC2Q8N2Y8 1516 aa9.07□□□□□ -0.96
MSR1-204ENST00000381998 WRNQ14191 1432 aaPredicted RBP eCLIP9.07□□□□□ -0.96
MSR1-204ENST00000381998 EEA1Q15075 1411 aa9.05□□□□□ -0.96
MSR1-204ENST00000381998 CLEC11AQ9Y240 323 aa9.05□□□□□ -0.96
MSR1-204ENST00000381998 NEUROD1Q13562 356 aa9.03□□□□□ -0.96
MSR1-204ENST00000381998 SPOCK2Q92563 424 aa9.03□□□□□ -0.96
MSR1-204ENST00000381998 CEP162Q5TB80 1403 aa9.03□□□□□ -0.96
MSR1-204ENST00000381998 SYNJ1O43426 1573 aa9.03□□□□□ -0.96
MSR1-204ENST00000381998 ACIN1Q9UKV3 1341 aaKnown RBP9.02□□□□□ -0.96
MSR1-204ENST00000381998 TNIKQ9UKE5 1360 aa9.02□□□□□ -0.97
MSR1-204ENST00000381998 STAG3Q9UJ98 1225 aa9.02□□□□□ -0.97
MSR1-204ENST00000381998 UBTFP17480 764 aaKnown RBP9.01□□□□□ -0.97
MSR1-204ENST00000381998 DIEXFQ68CQ4 756 aaKnown RBP9□□□□□ -0.97
MSR1-204ENST00000381998 RGL2O15211 777 aa9□□□□□ -0.97
MSR1-204ENST00000381998 NCAPD3P42695 1498 aa8.99□□□□□ -0.97
MSR1-204ENST00000381998 ECM2O94769 699 aaPredicted RBP8.99□□□□□ -0.97
MSR1-204ENST00000381998 HMGXB3Q12766 1538 aa8.98□□□□□ -0.97
MSR1-204ENST00000381998 CIZ1Q9ULV3 898 aaPredicted RBP8.98□□□□□ -0.97
MSR1-204ENST00000381998 GOLGA3Q08378 1498 aa8.97□□□□□ -0.97
MSR1-204ENST00000381998 REM2Q8IYK8 340 aaPredicted RBP8.97□□□□□ -0.97
MSR1-204ENST00000381998 NPM1P06748 294 aaKnown RBP eCLIP8.97□□□□□ -0.97
MSR1-204ENST00000381998 POTEHQ6S545 545 aa8.94□□□□□ -0.98
MSR1-204ENST00000381998 CEP164Q9UPV0 1460 aa8.94□□□□□ -0.98
MSR1-204ENST00000381998 KIF21BO75037 1637 aa8.93□□□□□ -0.98
MSR1-204ENST00000381998 TOP2BQ02880 1626 aa8.93□□□□□ -0.98
MSR1-204ENST00000381998 CENPBP07199 599 aaPredicted RBP8.92□□□□□ -0.98
MSR1-204ENST00000381998 AKT1S1Q96B36 256 aa8.92□□□□□ -0.98
MSR1-204ENST00000381998 PITPNM1O00562 1244 aa8.91□□□□□ -0.98
MSR1-204ENST00000381998 BIVM-ERCC5R4GMW8 1640 aa8.9□□□□□ -0.98
MSR1-204ENST00000381998 RBM42Q9BTD8 480 aaKnown RBP8.9□□□□□ -0.98
MSR1-204ENST00000381998 CREBZFQ9NS37 354 aa8.9□□□□□ -0.98
MSR1-204ENST00000381998 PLEKHG5O94827 1062 aa8.9□□□□□ -0.99
MSR1-204ENST00000381998 PRR29P0C7W0 189 aa8.9□□□□□ -0.99
MSR1-204ENST00000381998 NBR1Q14596 966 aa8.9□□□□□ -0.99
MSR1-204ENST00000381998 SPDYE1Q8NFV5 336 aaPredicted RBP8.89□□□□□ -0.99
MSR1-204ENST00000381998 CFTRP13569 1480 aa8.89□□□□□ -0.99
MSR1-204ENST00000381998 RAPGEF2Q9Y4G8 1499 aa8.89□□□□□ -0.99
MSR1-204ENST00000381998 CHADLQ6NUI6 762 aa8.89□□□□□ -0.99
MSR1-204ENST00000381998 ZNF316A6NFI3 1004 aaPredicted RBP8.88□□□□□ -0.99
MSR1-204ENST00000381998 MNX1P50219 401 aaPredicted RBP8.88□□□□□ -0.99
MSR1-204ENST00000381998 RNF25Q96BH1 459 aaPredicted RBP8.88□□□□□ -0.99
MSR1-204ENST00000381998 CUX1P39880 1505 aa8.87□□□□□ -0.99
MSR1-204ENST00000381998 CLIP1P30622 1438 aa8.87□□□□□ -0.99
MSR1-204ENST00000381998 NUBP1P53384 320 aa8.86□□□□□ -0.99
MSR1-204ENST00000381998 PRXQ9BXM0 1461 aa8.83□□□□□ -1
MSR1-204ENST00000381998 RASEFQ8IZ41 740 aa8.83□□□□□ -1
MSR1-204ENST00000381998 YTHDC1Q96MU7 727 aaKnown RBP8.83□□□□□ -1
MSR1-204ENST00000381998 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.83□□□□□ -1
MSR1-204ENST00000381998 PAXIP1Q6ZW49 1069 aaPredicted RBP8.83□□□□□ -1
MSR1-204ENST00000381998 VPS8Q8N3P4 1428 aa8.82□□□□□ -1
MSR1-204ENST00000381998 CHGAP10645 457 aaKnown RBP8.81□□□□□ -1
MSR1-204ENST00000381998 ERICH3Q5RHP9 1530 aa8.81□□□□□ -1
MSR1-204ENST00000381998 CADPSQ9ULU8 1353 aa8.81□□□□□ -1
MSR1-204ENST00000381998 DCAF8Q5TAQ9 597 aa8.8□□□□□ -1
MSR1-204ENST00000381998 CFAP44Q96MT7 982 aa8.8□□□□□ -1
MSR1-204ENST00000381998 KIF27Q86VH2 1401 aa8.8□□□□□ -1
MSR1-204ENST00000381998 CC2D2AQ9P2K1 1620 aa8.79□□□□□ -1
MSR1-204ENST00000381998 BBXQ8WY36 941 aaPredicted RBP8.78□□□□□ -1
MSR1-204ENST00000381998 ZBTB47Q9UFB7 747 aaPredicted RBP8.78□□□□□ -1
MSR1-204ENST00000381998 PRDM2Q13029 1718 aa8.78□□□□□ -1
MSR1-204ENST00000381998 TSHZ2Q9NRE2 1034 aa8.77□□□□□ -1.01
MSR1-204ENST00000381998 PYGBP11216 843 aa8.76□□□□□ -1.01
MSR1-204ENST00000381998 ARAP1Q96P48 1450 aa8.75□□□□□ -1.01
MSR1-204ENST00000381998 CCDC9Q9Y3X0 531 aaKnown RBP8.74□□□□□ -1.01
MSR1-204ENST00000381998 CUX2O14529 1486 aa8.73□□□□□ -1.01
MSR1-204ENST00000381998 IGF1RP08069 1367 aa8.73□□□□□ -1.01
MSR1-204ENST00000381998 FGD5Q6ZNL6 1462 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms