RNA–Protein interactions for RNA: ENST00000381337.6

THUMPD1-201, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 4,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-201ENST00000381337 ARID3CA6NKF2 412 aa15.33■□□□□ 0.05
THUMPD1-201ENST00000381337 DDRGK1Q96HY6 314 aa15.33■□□□□ 0.04
THUMPD1-201ENST00000381337 UPF2Q9HAU5 1272 aaKnown RBP15.32■□□□□ 0.04
THUMPD1-201ENST00000381337 SOGA1O94964 1423 aa15.32■□□□□ 0.04
THUMPD1-201ENST00000381337 LAS1LQ9Y4W2 734 aaKnown RBP15.32■□□□□ 0.04
THUMPD1-201ENST00000381337 WRNQ14191 1432 aaPredicted RBP eCLIP15.31■□□□□ 0.04
THUMPD1-201ENST00000381337 ARXQ96QS3 562 aa15.3■□□□□ 0.04
THUMPD1-201ENST00000381337 TIMELESSQ9UNS1 1208 aa15.28■□□□□ 0.04
THUMPD1-201ENST00000381337 SENP3-EIF4A1A0A087X0R7 540 aa15.28■□□□□ 0.04
THUMPD1-201ENST00000381337 ERICH6BQ5W0A0 696 aa15.28■□□□□ 0.04
THUMPD1-201ENST00000381337 ANP32BQ92688 251 aaKnown RBP15.27■□□□□ 0.04
THUMPD1-201ENST00000381337 CCNB3Q8WWL7 1395 aa15.27■□□□□ 0.04
THUMPD1-201ENST00000381337 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.26■□□□□ 0.03
THUMPD1-201ENST00000381337 KCNH8Q96L42 1107 aa15.25■□□□□ 0.03
THUMPD1-201ENST00000381337 MTUS2Q5JR59 1369 aa15.25■□□□□ 0.03
THUMPD1-201ENST00000381337 VPS8Q8N3P4 1428 aa15.24■□□□□ 0.03
THUMPD1-201ENST00000381337 ZNF777Q9ULD5 760 aaPredicted RBP15.23■□□□□ 0.03
THUMPD1-201ENST00000381337 RRP7BPQ9NSQ0 103 aa15.22■□□□□ 0.03
THUMPD1-201ENST00000381337 HSP90AA1P07900 732 aaKnown RBP15.21■□□□□ 0.03
THUMPD1-201ENST00000381337 CECR2Q9BXF3 1484 aa15.21■□□□□ 0.03
THUMPD1-201ENST00000381337 KANK4Q5T7N3 995 aaPredicted RBP15.17■□□□□ 0.02
THUMPD1-201ENST00000381337 CCDC88BA6NC98 1476 aa15.16■□□□□ 0.02
THUMPD1-201ENST00000381337 BECN1Q14457 450 aa15.15■□□□□ 0.02
THUMPD1-201ENST00000381337 KDM2AQ9Y2K7 1162 aa15.15■□□□□ 0.02
THUMPD1-201ENST00000381337 WDR43Q15061 677 aaKnown RBP eCLIP15.14■□□□□ 0.01
THUMPD1-201ENST00000381337 FANCIQ9NVI1 1328 aa15.14■□□□□ 0.01
THUMPD1-201ENST00000381337 DHX57Q6P158 1386 aaKnown RBP15.12■□□□□ 0.01
THUMPD1-201ENST00000381337 SETD5Q9C0A6 1442 aa15.12■□□□□ 0.01
THUMPD1-201ENST00000381337 PPP1R15AO75807 674 aaPredicted RBP15.11■□□□□ 0.01
THUMPD1-201ENST00000381337 IPO9Q96P70 1041 aaKnown RBP15.11■□□□□ 0.01
THUMPD1-201ENST00000381337 RAB3GAP2Q9H2M9 1393 aa15.1■□□□□ 0.01
THUMPD1-201ENST00000381337 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.08■□□□□ 0.01
THUMPD1-201ENST00000381337 ABCC8Q09428 1581 aa15.08■□□□□ 0
THUMPD1-201ENST00000381337 TRIM44Q96DX7 344 aaPredicted RBP15.08■□□□□ 0
THUMPD1-201ENST00000381337 HSPA5P11021 654 aaKnown RBP15.07■□□□□ 0
THUMPD1-201ENST00000381337 NAP1L5Q96NT1 182 aaPredicted RBP15.06■□□□□ 0
THUMPD1-201ENST00000381337 KIF27Q86VH2 1401 aa15.06■□□□□ 0
THUMPD1-201ENST00000381337 MROH2BQ7Z745 1585 aa15.05■□□□□ -0
THUMPD1-201ENST00000381337 RGS3P49796 1198 aa15.05■□□□□ -0
THUMPD1-201ENST00000381337 BAZ1AQ9NRL2 1556 aaPredicted RBP15.03■□□□□ -0
THUMPD1-201ENST00000381337 TCERG1O14776 1098 aaKnown RBP15.02□□□□□ -0.01
THUMPD1-201ENST00000381337 FBLN2P98095 1184 aa15.01□□□□□ -0.01
THUMPD1-201ENST00000381337 CARD11Q9BXL7 1154 aa14.98□□□□□ -0.01
THUMPD1-201ENST00000381337 TSPY4P0CV99 314 aa14.97□□□□□ -0.01
THUMPD1-201ENST00000381337 TSPY10P0CW01 314 aa14.97□□□□□ -0.01
THUMPD1-201ENST00000381337 NUDCQ9Y266 331 aa14.96□□□□□ -0.01
THUMPD1-201ENST00000381337 USP35Q9P2H5 1018 aa14.94□□□□□ -0.02
THUMPD1-201ENST00000381337 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.94□□□□□ -0.024e-12■□□□□ 11.2
THUMPD1-201ENST00000381337 FHAD1B1AJZ9 1412 aa14.93□□□□□ -0.02
THUMPD1-201ENST00000381337 L1TD1Q5T7N2 865 aaKnown RBP14.93□□□□□ -0.02
THUMPD1-201ENST00000381337 RCAN3Q9UKA8 241 aa14.93□□□□□ -0.02
THUMPD1-201ENST00000381337 NACADO15069 1562 aa14.92□□□□□ -0.02
THUMPD1-201ENST00000381337 GOLGA6L22H0YM25 854 aa14.91□□□□□ -0.02
THUMPD1-201ENST00000381337 RUSC2Q8N2Y8 1516 aa14.9□□□□□ -0.02
THUMPD1-201ENST00000381337 RGL3Q3MIN7 710 aa14.9□□□□□ -0.02
THUMPD1-201ENST00000381337 KNSTRNQ9Y448 316 aa14.87□□□□□ -0.03
THUMPD1-201ENST00000381337 BAZ1BQ9UIG0 1483 aaKnown RBP14.86□□□□□ -0.03
THUMPD1-201ENST00000381337 PNNQ9H307 717 aaKnown RBP14.85□□□□□ -0.03
THUMPD1-201ENST00000381337 ZBED9Q6R2W3 1325 aa14.85□□□□□ -0.03
THUMPD1-201ENST00000381337 PDE4AP27815 886 aa14.85□□□□□ -0.03
THUMPD1-201ENST00000381337 CC2D1BQ5T0F9 858 aaKnown RBP14.85□□□□□ -0.03
THUMPD1-201ENST00000381337 PRKRIP1Q9H875 184 aaPredicted RBP14.85□□□□□ -0.03
THUMPD1-201ENST00000381337 NCLP19338 710 aaKnown RBP14.84□□□□□ -0.03
THUMPD1-201ENST00000381337 RAPGEF2Q9Y4G8 1499 aa14.84□□□□□ -0.03
THUMPD1-201ENST00000381337 ARHGAP35Q9NRY4 1499 aa14.83□□□□□ -0.04
THUMPD1-201ENST00000381337 CARMIL1Q5VZK9 1371 aa14.83□□□□□ -0.04
THUMPD1-201ENST00000381337 WIZO95785 1651 aa14.83□□□□□ -0.04
THUMPD1-201ENST00000381337 GSE1Q14687 1217 aa14.83□□□□□ -0.04
THUMPD1-201ENST00000381337 FOXD1Q16676 465 aa14.82□□□□□ -0.04
THUMPD1-201ENST00000381337 L3MBTL2Q969R5 705 aa14.82□□□□□ -0.04
THUMPD1-201ENST00000381337 CHGAP10645 457 aaKnown RBP14.82□□□□□ -0.04
THUMPD1-201ENST00000381337 FRAT1Q92837 279 aaPredicted RBP14.82□□□□□ -0.04
THUMPD1-201ENST00000381337 TNNT2P45379 298 aaPredicted RBP14.81□□□□□ -0.04
THUMPD1-201ENST00000381337 SLKQ9H2G2 1235 aaPredicted RBP14.81□□□□□ -0.04
THUMPD1-201ENST00000381337 CFDP1Q9UEE9 299 aaPredicted RBP14.8□□□□□ -0.04
THUMPD1-201ENST00000381337 SLC24A1O60721 1099 aa14.79□□□□□ -0.04
THUMPD1-201ENST00000381337 MPHOSPH9Q99550 1183 aa14.79□□□□□ -0.04
THUMPD1-201ENST00000381337 NEUROD2Q15784 382 aa14.79□□□□□ -0.04
THUMPD1-201ENST00000381337 CDCA8Q53HL2 280 aa14.79□□□□□ -0.04
THUMPD1-201ENST00000381337 ANO8Q9HCE9 1232 aaPredicted RBP14.78□□□□□ -0.04
THUMPD1-201ENST00000381337 RSPH6AQ9H0K4 717 aa14.78□□□□□ -0.04
THUMPD1-201ENST00000381337 PTMAP06454 111 aaKnown RBP14.78□□□□□ -0.04
THUMPD1-201ENST00000381337 MYH16Q9H6N6 1097 aa14.77□□□□□ -0.04
THUMPD1-201ENST00000381337 RALBP1Q15311 655 aa14.77□□□□□ -0.05
THUMPD1-201ENST00000381337 FTSJ3Q8IY81 847 aaKnown RBP14.77□□□□□ -0.05
THUMPD1-201ENST00000381337 SPRYD3Q8NCJ5 442 aa14.77□□□□□ -0.05
THUMPD1-201ENST00000381337 DNTTIP2Q5QJE6 756 aaKnown RBP14.76□□□□□ -0.05
THUMPD1-201ENST00000381337 GZF1Q9H116 711 aaPredicted RBP14.76□□□□□ -0.05
THUMPD1-201ENST00000381337 MSH5O43196 834 aa14.76□□□□□ -0.05
THUMPD1-201ENST00000381337 SLC4A3P48751 1232 aa14.76□□□□□ -0.05
THUMPD1-201ENST00000381337 PDE3BQ13370 1112 aa14.76□□□□□ -0.05
THUMPD1-201ENST00000381337 DCAF11Q8TEB1 546 aa14.76□□□□□ -0.05
THUMPD1-201ENST00000381337 ARID4BQ4LE39 1312 aaPredicted RBP14.76□□□□□ -0.05
THUMPD1-201ENST00000381337 EXOC6Q8TAG9 804 aa14.75□□□□□ -0.05
THUMPD1-201ENST00000381337 FMN1Q68DA7 1419 aa14.75□□□□□ -0.05
THUMPD1-201ENST00000381337 PAK3O75914 559 aaPredicted RBP14.74□□□□□ -0.05
THUMPD1-201ENST00000381337 CUX2O14529 1486 aa14.74□□□□□ -0.05
THUMPD1-201ENST00000381337 HSP90AB1P08238 724 aaKnown RBP14.74□□□□□ -0.05
THUMPD1-201ENST00000381337 HSCBQ8IWL3 235 aa14.73□□□□□ -0.05
THUMPD1-201ENST00000381337 MS4A1P11836 297 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms