RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 GABBR2O75899 941 aa8.51□□□□□ -1.05
SMC6-202ENST00000381272 SPOCK2Q92563 424 aa8.5□□□□□ -1.05
SMC6-202ENST00000381272 CCDC61Q9Y6R9 512 aa8.5□□□□□ -1.05
SMC6-202ENST00000381272 PHF12Q96QT6 1004 aa8.49□□□□□ -1.05
SMC6-202ENST00000381272 DCAF8Q5TAQ9 597 aa8.47□□□□□ -1.05
SMC6-202ENST00000381272 GSE1Q14687 1217 aa8.45□□□□□ -1.06
SMC6-202ENST00000381272 KIF12Q96FN5 646 aa8.42□□□□□ -1.06
SMC6-202ENST00000381272 GALR2O43603 387 aaPredicted RBP8.41□□□□□ -1.06
SMC6-202ENST00000381272 CIZ1Q9ULV3 898 aaPredicted RBP8.4□□□□□ -1.07
SMC6-202ENST00000381272 MAP3K13O43283 966 aa8.39□□□□□ -1.07
SMC6-202ENST00000381272 MS4A3Q96HJ5 214 aa8.38□□□□□ -1.07
SMC6-202ENST00000381272 DCBLD2Q96PD2 775 aa8.38□□□□□ -1.07
SMC6-202ENST00000381272 SGIP1Q9BQI5 828 aa8.38□□□□□ -1.07
SMC6-202ENST00000381272 PYGBP11216 843 aa8.37□□□□□ -1.07
SMC6-202ENST00000381272 PCDHB13Q9Y5F0 798 aa8.36□□□□□ -1.07
SMC6-202ENST00000381272 CHRM1P11229 460 aaPredicted RBP8.33□□□□□ -1.08
SMC6-202ENST00000381272 IFNL1Q8IU54 200 aa8.31□□□□□ -1.08
SMC6-202ENST00000381272 TRIM41Q8WV44 630 aa8.31□□□□□ -1.08
SMC6-202ENST00000381272 POTEIP0CG38 1075 aa8.31□□□□□ -1.08
SMC6-202ENST00000381272 ZNF467Q7Z7K2 595 aaPredicted RBP8.29□□□□□ -1.08
SMC6-202ENST00000381272 TIE1P35590 1138 aa8.27□□□□□ -1.09
SMC6-202ENST00000381272 ASTLQ6HA08 431 aaPredicted RBP8.27□□□□□ -1.09
SMC6-202ENST00000381272 PCDHB8Q9UN66 801 aa8.27□□□□□ -1.09
SMC6-202ENST00000381272 TRPC6Q9Y210 931 aa8.27□□□□□ -1.09
SMC6-202ENST00000381272 ATMINO43313 823 aaPredicted RBP8.25□□□□□ -1.09
SMC6-202ENST00000381272 BMP2KQ9NSY1 1161 aaPredicted RBP8.25□□□□□ -1.09
SMC6-202ENST00000381272 TTLL13PA6NNM8 815 aa8.22□□□□□ -1.09
SMC6-202ENST00000381272 ATN1P54259 1190 aaPredicted RBP8.22□□□□□ -1.09
SMC6-202ENST00000381272 PKD2Q13563 968 aa8.22□□□□□ -1.09
SMC6-202ENST00000381272 TMEM106CQ9BVX2 250 aa8.22□□□□□ -1.09
SMC6-202ENST00000381272 PELP1Q8IZL8 1130 aaKnown RBP8.21□□□□□ -1.1
SMC6-202ENST00000381272 ECM2O94769 699 aaPredicted RBP8.2□□□□□ -1.1
SMC6-202ENST00000381272 PDAP1Q13442 181 aaKnown RBP8.19□□□□□ -1.1
SMC6-202ENST00000381272 LHX8Q68G74 356 aa8.19□□□□□ -1.1
SMC6-202ENST00000381272 PSEN1P49768 467 aa8.19□□□□□ -1.1
SMC6-202ENST00000381272 SLC39A7Q92504 469 aa8.19□□□□□ -1.1
SMC6-202ENST00000381272 TRIM35Q9UPQ4 493 aa8.18□□□□□ -1.1
SMC6-202ENST00000381272 RIOK3O14730 519 aaKnown RBP8.17□□□□□ -1.1
SMC6-202ENST00000381272 C7P10643 843 aa8.17□□□□□ -1.1
SMC6-202ENST00000381272 RNF25Q96BH1 459 aaPredicted RBP8.17□□□□□ -1.1
SMC6-202ENST00000381272 METRNQ9UJH8 293 aa8.15□□□□□ -1.1
SMC6-202ENST00000381272 TAOK2Q9UL54 1235 aa8.14□□□□□ -1.11
SMC6-202ENST00000381272 VGFO15240 615 aaPredicted RBP8.13□□□□□ -1.11
SMC6-202ENST00000381272 GOLGA2Q08379 1002 aa8.13□□□□□ -1.11
SMC6-202ENST00000381272 IER5LQ5T953 404 aa8.13□□□□□ -1.11
SMC6-202ENST00000381272 RGL2O15211 777 aa8.11□□□□□ -1.11
SMC6-202ENST00000381272 SEC24BO95487 1268 aa8.1□□□□□ -1.11
SMC6-202ENST00000381272 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.09□□□□□ -1.11
SMC6-202ENST00000381272 MKRN3Q13064 507 aaKnown RBP8.09□□□□□ -1.11
SMC6-202ENST00000381272 ZFP91Q96JP5 570 aaPredicted RBP8.09□□□□□ -1.11
SMC6-202ENST00000381272 CABP2Q9NPB3 220 aa8.08□□□□□ -1.12
SMC6-202ENST00000381272 COLQQ9Y215 455 aaPredicted RBP8.06□□□□□ -1.12
SMC6-202ENST00000381272 POTEFA5A3E0 1075 aa8.06□□□□□ -1.12
SMC6-202ENST00000381272 PLCG2P16885 1265 aa8.06□□□□□ -1.12
SMC6-202ENST00000381272 IRX5P78411 483 aaPredicted RBP8.06□□□□□ -1.12
SMC6-202ENST00000381272 OCEL1Q9H607 264 aa8.05□□□□□ -1.12
SMC6-202ENST00000381272 POTEB2H3BUK9 544 aa8.04□□□□□ -1.12
SMC6-202ENST00000381272 AMER1Q5JTC6 1135 aaPredicted RBP8.04□□□□□ -1.12
SMC6-202ENST00000381272 BCL11BQ9C0K0 894 aaPredicted RBP8.04□□□□□ -1.12
SMC6-202ENST00000381272 STK25O00506 426 aa8.03□□□□□ -1.12
SMC6-202ENST00000381272 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.03□□□□□ -1.127e-7■■■■■ 27.1
SMC6-202ENST00000381272 STK24Q9Y6E0 443 aa8.03□□□□□ -1.12
SMC6-202ENST00000381272 EFCAB3Q8N7B9 438 aa8.01□□□□□ -1.13
SMC6-202ENST00000381272 MAMSTRQ6ZN01 415 aa7.99□□□□□ -1.13
SMC6-202ENST00000381272 SOX12O15370 315 aa7.99□□□□□ -1.13
SMC6-202ENST00000381272 ILDR1Q86SU0 546 aaPredicted RBP7.99□□□□□ -1.13
SMC6-202ENST00000381272 PDCD7Q8N8D1 485 aaKnown RBP7.99□□□□□ -1.13
SMC6-202ENST00000381272 POTEJP0CG39 1038 aa7.98□□□□□ -1.13
SMC6-202ENST00000381272 RTN4Q9NQC3 1192 aaKnown RBP7.98□□□□□ -1.13
SMC6-202ENST00000381272 DCAF8L2P0C7V8 631 aa7.96□□□□□ -1.14
SMC6-202ENST00000381272 CHGAP10645 457 aaKnown RBP7.96□□□□□ -1.14
SMC6-202ENST00000381272 HS6ST3Q8IZP7 471 aa7.96□□□□□ -1.14
SMC6-202ENST00000381272 OTUD5Q96G74 571 aa7.96□□□□□ -1.14
SMC6-202ENST00000381272 SCUBE2Q9NQ36 999 aa7.96□□□□□ -1.14
SMC6-202ENST00000381272 PLSCR2Q9NRY7 297 aa7.95□□□□□ -1.14
SMC6-202ENST00000381272 L3MBTL3Q96JM7 780 aaPredicted RBP7.94□□□□□ -1.14
SMC6-202ENST00000381272 PHF8Q9UPP1 1060 aa7.93□□□□□ -1.14
SMC6-202ENST00000381272 NLRP6P59044 892 aa7.92□□□□□ -1.14
SMC6-202ENST00000381272 DPY19L2Q6NUT2 758 aa7.92□□□□□ -1.14
SMC6-202ENST00000381272 G3V3G9 751 aa7.91□□□□□ -1.14
SMC6-202ENST00000381272 MFRPQ9BY79 579 aa7.9□□□□□ -1.14
SMC6-202ENST00000381272 FBXO22Q8NEZ5 403 aa7.89□□□□□ -1.15
SMC6-202ENST00000381272 MS4A4AQ96JQ5 239 aa7.89□□□□□ -1.15
SMC6-202ENST00000381272 BOLA1Q9Y3E2 137 aa7.89□□□□□ -1.15
SMC6-202ENST00000381272 C3orf67Q6ZVT6 689 aa7.88□□□□□ -1.15
SMC6-202ENST00000381272 DNAJC5Q9H3Z4 198 aa7.87□□□□□ -1.15
SMC6-202ENST00000381272 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.87□□□□□ -1.15
SMC6-202ENST00000381272 SLAIN1Q8ND83 568 aa7.85□□□□□ -1.15
SMC6-202ENST00000381272 TMEM121BQ9BXQ6 578 aaPredicted RBP7.84□□□□□ -1.15
SMC6-202ENST00000381272 MICALL2Q8IY33 904 aa7.83□□□□□ -1.16
SMC6-202ENST00000381272 RYDENQ9NUL5 291 aaKnown RBP7.83□□□□□ -1.16
SMC6-202ENST00000381272 NKX1-1Q15270 411 aaPredicted RBP7.82□□□□□ -1.16
SMC6-202ENST00000381272 PPP1R37O75864 691 aa7.78□□□□□ -1.16
SMC6-202ENST00000381272 BBXQ8WY36 941 aaPredicted RBP7.76□□□□□ -1.17
SMC6-202ENST00000381272 SNPHO15079 494 aa7.75□□□□□ -1.17
SMC6-202ENST00000381272 GTPBP6O43824 516 aaPredicted RBP7.75□□□□□ -1.17
SMC6-202ENST00000381272 TMEM92Q6UXU6 159 aa7.72□□□□□ -1.17
SMC6-202ENST00000381272 FAM163AQ96GL9 167 aaPredicted RBP7.72□□□□□ -1.17
SMC6-202ENST00000381272 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.72□□□□□ -1.17
SMC6-202ENST00000381272 POTEMA6NI47 508 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms