RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 MTUS2Q5JR59 1369 aa22.55■■□□□ 1.2
SNAPC3-202ENST00000380821 EEA1Q15075 1411 aa22.49■■□□□ 1.19
SNAPC3-202ENST00000380821 KDM2AQ9Y2K7 1162 aa22.49■■□□□ 1.19
SNAPC3-202ENST00000380821 GOLGA3Q08378 1498 aa22.49■■□□□ 1.19
SNAPC3-202ENST00000380821 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.48■■□□□ 1.194e-6■■■□□ 16.3
SNAPC3-202ENST00000380821 TNNT2P45379 298 aaPredicted RBP22.47■■□□□ 1.19
SNAPC3-202ENST00000380821 TSPY4P0CV99 314 aa22.47■■□□□ 1.19
SNAPC3-202ENST00000380821 TSPY10P0CW01 314 aa22.47■■□□□ 1.19
SNAPC3-202ENST00000380821 ERICH6BQ5W0A0 696 aa22.45■■□□□ 1.18
SNAPC3-202ENST00000380821 HIRIP3Q9BW71 556 aaPredicted RBP22.45■■□□□ 1.18
SNAPC3-202ENST00000380821 MYO15BQ96JP2 1530 aa22.44■■□□□ 1.18
SNAPC3-202ENST00000380821 CEP162Q5TB80 1403 aa22.43■■□□□ 1.18
SNAPC3-202ENST00000380821 PPP4R2Q9NY27 417 aa22.42■■□□□ 1.18
SNAPC3-202ENST00000380821 RSF1Q96T23 1441 aaPredicted RBP22.42■■□□□ 1.18
SNAPC3-202ENST00000380821 NOP58Q9Y2X3 529 aaKnown RBP22.39■■□□□ 1.17
SNAPC3-202ENST00000380821 SUPT16HQ9Y5B9 1047 aaKnown RBP22.39■■□□□ 1.17
SNAPC3-202ENST00000380821 CDK11BP21127 795 aaKnown RBP22.36■■□□□ 1.17
SNAPC3-202ENST00000380821 CASC1Q6TDU7 716 aa22.36■■□□□ 1.17
SNAPC3-202ENST00000380821 PTMAP06454 111 aaKnown RBP22.35■■□□□ 1.17
SNAPC3-202ENST00000380821 NPM1P06748 294 aaKnown RBP eCLIP22.32■■□□□ 1.16
SNAPC3-202ENST00000380821 RRP7BPQ9NSQ0 103 aa22.31■■□□□ 1.16
SNAPC3-202ENST00000380821 CDCA8Q53HL2 280 aa22.3■■□□□ 1.16
SNAPC3-202ENST00000380821 CFAP53Q96M91 514 aa22.3■■□□□ 1.16
SNAPC3-202ENST00000380821 NAP1L5Q96NT1 182 aaPredicted RBP22.29■■□□□ 1.16
SNAPC3-202ENST00000380821 DNTTIP2Q5QJE6 756 aaKnown RBP22.26■■□□□ 1.15
SNAPC3-202ENST00000380821 LAS1LQ9Y4W2 734 aaKnown RBP22.25■■□□□ 1.15
SNAPC3-202ENST00000380821 TNIKQ9UKE5 1360 aa22.24■■□□□ 1.15
SNAPC3-202ENST00000380821 ZRSR1Q15695 479 aaKnown RBP22.23■■□□□ 1.15
SNAPC3-202ENST00000380821 KNSTRNQ9Y448 316 aa22.23■■□□□ 1.15
SNAPC3-202ENST00000380821 FTSJ3Q8IY81 847 aaKnown RBP22.23■■□□□ 1.15
SNAPC3-202ENST00000380821 RTN4Q9NQC3 1192 aaKnown RBP22.19■■□□□ 1.14
SNAPC3-202ENST00000380821 CEP164Q9UPV0 1460 aa22.19■■□□□ 1.14
SNAPC3-202ENST00000380821 CHMP4BQ9H444 224 aaKnown RBP22.16■■□□□ 1.14
SNAPC3-202ENST00000380821 CARD11Q9BXL7 1154 aa22.15■■□□□ 1.14
SNAPC3-202ENST00000380821 L1TD1Q5T7N2 865 aaKnown RBP22.14■■□□□ 1.13
SNAPC3-202ENST00000380821 MS4A1P11836 297 aa22.13■■□□□ 1.13
SNAPC3-202ENST00000380821 GOLGA6L6A8MZA4 724 aa22.11■■□□□ 1.13
SNAPC3-202ENST00000380821 HSP90AB1P08238 724 aaKnown RBP22.11■■□□□ 1.13
SNAPC3-202ENST00000380821 CCER2I3L3R5 266 aa22.1■■□□□ 1.13
SNAPC3-202ENST00000380821 RGS3P49796 1198 aa22.09■■□□□ 1.13
SNAPC3-202ENST00000380821 DEKP35659 375 aaKnown RBP22.08■■□□□ 1.13
SNAPC3-202ENST00000380821 MAPK8IP3Q9UPT6 1336 aa22.08■■□□□ 1.13
SNAPC3-202ENST00000380821 WRNQ14191 1432 aaPredicted RBP eCLIP22.08■■□□□ 1.12
SNAPC3-202ENST00000380821 CHMP7Q8WUX9 453 aaPredicted RBP22.06■■□□□ 1.12
SNAPC3-202ENST00000380821 PLPPR3Q6T4P5 718 aa22.04■■□□□ 1.12
SNAPC3-202ENST00000380821 NUDCQ9Y266 331 aa22.04■■□□□ 1.12
SNAPC3-202ENST00000380821 B4GALNT3Q6L9W6 998 aa22.04■■□□□ 1.12
SNAPC3-202ENST00000380821 TIMELESSQ9UNS1 1208 aa22.04■■□□□ 1.12
SNAPC3-202ENST00000380821 PLEKHD1A6NEE1 506 aa22.04■■□□□ 1.12
SNAPC3-202ENST00000380821 RGL3Q3MIN7 710 aa22.04■■□□□ 1.12
SNAPC3-202ENST00000380821 HSCBQ8IWL3 235 aa22.03■■□□□ 1.12
SNAPC3-202ENST00000380821 KIF27Q86VH2 1401 aa22.02■■□□□ 1.12
SNAPC3-202ENST00000380821 PPP1R15AO75807 674 aaPredicted RBP22.01■■□□□ 1.11
SNAPC3-202ENST00000380821 RBM19Q9Y4C8 960 aaKnown RBP22.01■■□□□ 1.11
SNAPC3-202ENST00000380821 FRAT1Q92837 279 aaPredicted RBP21.99■■□□□ 1.11
SNAPC3-202ENST00000380821 SENP3-EIF4A1A0A087X0R7 540 aa21.99■■□□□ 1.11
SNAPC3-202ENST00000380821 SIN3AQ96ST3 1273 aa21.99■■□□□ 1.11
SNAPC3-202ENST00000380821 CHAF1AQ13111 956 aaPredicted RBP21.98■■□□□ 1.11
SNAPC3-202ENST00000380821 AMER1Q5JTC6 1135 aaPredicted RBP21.98■■□□□ 1.11
SNAPC3-202ENST00000380821 MSNP26038 577 aaKnown RBP21.98■■□□□ 1.11
SNAPC3-202ENST00000380821 NRDCO43847 1150 aa21.97■■□□□ 1.11
SNAPC3-202ENST00000380821 CFDP1Q9UEE9 299 aaPredicted RBP21.97■■□□□ 1.11
SNAPC3-202ENST00000380821 PNNQ9H307 717 aaKnown RBP21.97■■□□□ 1.11
SNAPC3-202ENST00000380821 ZBTB7CA1YPR0 619 aa21.96■■□□□ 1.11
SNAPC3-202ENST00000380821 TPRNQ4KMQ1 711 aa21.96■■□□□ 1.11
SNAPC3-202ENST00000380821 CFAP44Q96MT7 982 aa21.95■■□□□ 1.11
SNAPC3-202ENST00000380821 PLCB2Q00722 1185 aa21.95■■□□□ 1.1
SNAPC3-202ENST00000380821 PTMSP20962 102 aa21.95■■□□□ 1.1
SNAPC3-202ENST00000380821 CCNB3Q8WWL7 1395 aa21.95■■□□□ 1.1
SNAPC3-202ENST00000380821 NEUROD2Q15784 382 aa21.94■■□□□ 1.1
SNAPC3-202ENST00000380821 C14orf37Q86TY3 774 aa21.93■■□□□ 1.1
SNAPC3-202ENST00000380821 RB1CC1Q8TDY2 1594 aa21.92■■□□□ 1.1
SNAPC3-202ENST00000380821 CC2D1BQ5T0F9 858 aaKnown RBP21.92■■□□□ 1.1
SNAPC3-202ENST00000380821 FHAD1B1AJZ9 1412 aa21.89■■□□□ 1.09
SNAPC3-202ENST00000380821 TMF1P82094 1093 aa21.89■■□□□ 1.09
SNAPC3-202ENST00000380821 MCCP23508 829 aa21.86■■□□□ 1.09
SNAPC3-202ENST00000380821 KCNH8Q96L42 1107 aa21.84■■□□□ 1.09
SNAPC3-202ENST00000380821 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.84■■□□□ 1.09
SNAPC3-202ENST00000380821 SETD5Q9C0A6 1442 aa21.83■■□□□ 1.09
SNAPC3-202ENST00000380821 GOLGA6L4A6NEF3 574 aa21.83■■□□□ 1.08
SNAPC3-202ENST00000380821 BAZ1BQ9UIG0 1483 aaKnown RBP21.82■■□□□ 1.08
SNAPC3-202ENST00000380821 OS9Q13438 667 aaPredicted RBP21.82■■□□□ 1.08
SNAPC3-202ENST00000380821 TCERG1O14776 1098 aaKnown RBP21.81■■□□□ 1.08
SNAPC3-202ENST00000380821 A0A0G2JS52 829 aa21.8■■□□□ 1.08
SNAPC3-202ENST00000380821 FGD1P98174 961 aa21.8■■□□□ 1.08
SNAPC3-202ENST00000380821 GBP4Q96PP9 640 aa21.8■■□□□ 1.08
SNAPC3-202ENST00000380821 KCNJ4P48050 445 aa21.79■■□□□ 1.08
SNAPC3-202ENST00000380821 KTN1Q86UP2 1357 aaKnown RBP21.77■■□□□ 1.08
SNAPC3-202ENST00000380821 HSPA5P11021 654 aaKnown RBP21.77■■□□□ 1.08
SNAPC3-202ENST00000380821 POGKQ9P215 609 aa21.77■■□□□ 1.07
SNAPC3-202ENST00000380821 U2SURPO15042 1029 aaKnown RBP21.76■■□□□ 1.07
SNAPC3-202ENST00000380821 SENP3Q9H4L4 574 aaPredicted RBP21.76■■□□□ 1.07
SNAPC3-202ENST00000380821 DRC7Q8IY82 874 aa21.74■■□□□ 1.07
SNAPC3-202ENST00000380821 ARHGAP35Q9NRY4 1499 aa21.73■■□□□ 1.07
SNAPC3-202ENST00000380821 SPRYD3Q8NCJ5 442 aa21.73■■□□□ 1.07
SNAPC3-202ENST00000380821 TSHZ2Q9NRE2 1034 aa21.72■■□□□ 1.07
SNAPC3-202ENST00000380821 DCAF11Q8TEB1 546 aa21.71■■□□□ 1.07
SNAPC3-202ENST00000380821 HAP1P54257 671 aaPredicted RBP21.71■■□□□ 1.07
SNAPC3-202ENST00000380821 RCAN3Q9UKA8 241 aa21.7■■□□□ 1.06
SNAPC3-202ENST00000380821 VPS8Q8N3P4 1428 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms