RNA–Protein interactions for RNA: ENST00000379370.6

AGRN-201, Transcript of agrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AGRN, Length 7,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-201ENST00000379370 ANP32BQ92688 251 aaKnown RBP19.19■□□□□ 0.66
AGRN-201ENST00000379370 TAOK2Q9UL54 1235 aa19.18■□□□□ 0.66
AGRN-201ENST00000379370 UPF2Q9HAU5 1272 aaKnown RBP19.18■□□□□ 0.66
AGRN-201ENST00000379370 HNRNPUQ00839 825 aaKnown RBP eCLIP19.17■□□□□ 0.66
AGRN-201ENST00000379370 DDX10Q13206 875 aaKnown RBP19.16■□□□□ 0.66
AGRN-201ENST00000379370 SENP3-EIF4A1A0A087X0R7 540 aa19.15■□□□□ 0.66
AGRN-201ENST00000379370 RGL3Q3MIN7 710 aa19.14■□□□□ 0.65
AGRN-201ENST00000379370 HIRIP3Q9BW71 556 aaPredicted RBP19.12■□□□□ 0.65
AGRN-201ENST00000379370 RRP7BPQ9NSQ0 103 aa19.12■□□□□ 0.65
AGRN-201ENST00000379370 MLECQ14165 292 aa19.1■□□□□ 0.65
AGRN-201ENST00000379370 PLEKHD1A6NEE1 506 aa19.09■□□□□ 0.65
AGRN-201ENST00000379370 NCBP3Q53F19 620 aaKnown RBP19.09■□□□□ 0.65
AGRN-201ENST00000379370 TPRNQ4KMQ1 711 aa19.08■□□□□ 0.65
AGRN-201ENST00000379370 MYH16Q9H6N6 1097 aa19.07■□□□□ 0.64
AGRN-201ENST00000379370 BAZ1BQ9UIG0 1483 aaKnown RBP19.06■□□□□ 0.64
AGRN-201ENST00000379370 FKBP8Q14318 412 aa19.06■□□□□ 0.64
AGRN-201ENST00000379370 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.05■□□□□ 0.64
AGRN-201ENST00000379370 LAS1LQ9Y4W2 734 aaKnown RBP19.02■□□□□ 0.64
AGRN-201ENST00000379370 SOX12O15370 315 aa19■□□□□ 0.63
AGRN-201ENST00000379370 EIF5BO60841 1220 aaKnown RBP18.97■□□□□ 0.63
AGRN-201ENST00000379370 IRX6P78412 446 aaPredicted RBP18.96■□□□□ 0.62
AGRN-201ENST00000379370 CCDC136Q96JN2 1154 aa18.93■□□□□ 0.62
AGRN-201ENST00000379370 EIF4G1Q04637 1599 aaKnown RBP18.93■□□□□ 0.62
AGRN-201ENST00000379370 TNNT2P45379 298 aaPredicted RBP18.92■□□□□ 0.62
AGRN-201ENST00000379370 MRS2Q9HD23 443 aa18.92■□□□□ 0.62
AGRN-201ENST00000379370 NACADO15069 1562 aa18.92■□□□□ 0.62
AGRN-201ENST00000379370 CLIP1P30622 1438 aa18.91■□□□□ 0.62
AGRN-201ENST00000379370 POGKQ9P215 609 aa18.91■□□□□ 0.62
AGRN-201ENST00000379370 NEUROD2Q15784 382 aa18.9■□□□□ 0.62
AGRN-201ENST00000379370 CFDP1Q9UEE9 299 aaPredicted RBP18.9■□□□□ 0.62
AGRN-201ENST00000379370 RSF1Q96T23 1441 aaPredicted RBP18.89■□□□□ 0.61
AGRN-201ENST00000379370 NBR1Q14596 966 aa18.88■□□□□ 0.61
AGRN-201ENST00000379370 GOLGA2Q08379 1002 aa18.84■□□□□ 0.61
AGRN-201ENST00000379370 ISY1Q9ULR0 285 aaKnown RBP18.83■□□□□ 0.6
AGRN-201ENST00000379370 CCDC9Q9Y3X0 531 aaKnown RBP18.79■□□□□ 0.6
AGRN-201ENST00000379370 CLSTN1O94985 981 aa18.79■□□□□ 0.6
AGRN-201ENST00000379370 SAFB2Q14151 953 aaKnown RBP eCLIP18.78■□□□□ 0.6
AGRN-201ENST00000379370 NAP1L2Q9ULW6 460 aaPredicted RBP18.78■□□□□ 0.6
AGRN-201ENST00000379370 CFAP53Q96M91 514 aa18.77■□□□□ 0.59
AGRN-201ENST00000379370 KIF27Q86VH2 1401 aa18.77■□□□□ 0.59
AGRN-201ENST00000379370 GOLGA3Q08378 1498 aa18.77■□□□□ 0.59
AGRN-201ENST00000379370 WRNQ14191 1432 aaPredicted RBP eCLIP18.76■□□□□ 0.591e-6■■■■□ 20.5
AGRN-201ENST00000379370 OS9Q13438 667 aaPredicted RBP18.76■□□□□ 0.59
AGRN-201ENST00000379370 EIF4G2P78344 907 aaKnown RBP eCLIP18.75■□□□□ 0.592e-7■■■■■ 96.8
AGRN-201ENST00000379370 NCLP19338 710 aaKnown RBP18.74■□□□□ 0.59
AGRN-201ENST00000379370 ZNF330Q9Y3S2 320 aaPredicted RBP18.74■□□□□ 0.59
AGRN-201ENST00000379370 U2SURPO15042 1029 aaKnown RBP18.72■□□□□ 0.59
AGRN-201ENST00000379370 KNSTRNQ9Y448 316 aa18.72■□□□□ 0.59
AGRN-201ENST00000379370 FTSJ3Q8IY81 847 aaKnown RBP18.72■□□□□ 0.59
AGRN-201ENST00000379370 ZRSR1Q15695 479 aaKnown RBP18.72■□□□□ 0.59
AGRN-201ENST00000379370 PAK3O75914 559 aaPredicted RBP18.71■□□□□ 0.59
AGRN-201ENST00000379370 MAPK8IP3Q9UPT6 1336 aa18.69■□□□□ 0.58
AGRN-201ENST00000379370 DCAF1Q9Y4B6 1507 aa18.69■□□□□ 0.58
AGRN-201ENST00000379370 CARD11Q9BXL7 1154 aa18.67■□□□□ 0.58
AGRN-201ENST00000379370 AMER1Q5JTC6 1135 aaPredicted RBP18.67■□□□□ 0.58
AGRN-201ENST00000379370 FGD1P98174 961 aa18.66■□□□□ 0.58
AGRN-201ENST00000379370 STK26Q9P289 416 aa18.66■□□□□ 0.58
AGRN-201ENST00000379370 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.66■□□□□ 0.58
AGRN-201ENST00000379370 CEP162Q5TB80 1403 aa18.65■□□□□ 0.58
AGRN-201ENST00000379370 ACIN1Q9UKV3 1341 aaKnown RBP18.64■□□□□ 0.57
AGRN-201ENST00000379370 CC2D1BQ5T0F9 858 aaKnown RBP18.63■□□□□ 0.57
AGRN-201ENST00000379370 GGT6Q6P531 493 aa18.63■□□□□ 0.57
AGRN-201ENST00000379370 FRAT1Q92837 279 aaPredicted RBP18.62■□□□□ 0.57
AGRN-201ENST00000379370 KANK1Q14678 1352 aa18.62■□□□□ 0.57
AGRN-201ENST00000379370 CSB-PGBD3P0DP91 1061 aa18.62■□□□□ 0.57
AGRN-201ENST00000379370 CCNB3Q8WWL7 1395 aa18.62■□□□□ 0.57
AGRN-201ENST00000379370 SRPK2P78362 688 aaKnown RBP18.62■□□□□ 0.57
AGRN-201ENST00000379370 CASC1Q6TDU7 716 aa18.62■□□□□ 0.57
AGRN-201ENST00000379370 AEBP2Q6ZN18 517 aaPredicted RBP18.62■□□□□ 0.57
AGRN-201ENST00000379370 CDCA8Q53HL2 280 aa18.61■□□□□ 0.57
AGRN-201ENST00000379370 KCNJ4P48050 445 aa18.61■□□□□ 0.57
AGRN-201ENST00000379370 NUDCQ9Y266 331 aa18.58■□□□□ 0.57
AGRN-201ENST00000379370 CUX2O14529 1486 aa18.57■□□□□ 0.56
AGRN-201ENST00000379370 HDGFP51858 240 aaKnown RBP18.56■□□□□ 0.56
AGRN-201ENST00000379370 PLCB2Q00722 1185 aa18.56■□□□□ 0.56
AGRN-201ENST00000379370 BAZ1AQ9NRL2 1556 aaPredicted RBP18.56■□□□□ 0.56
AGRN-201ENST00000379370 CECR2Q9BXF3 1484 aa18.54■□□□□ 0.56
AGRN-201ENST00000379370 CEP164Q9UPV0 1460 aa18.54■□□□□ 0.56
AGRN-201ENST00000379370 EEA1Q15075 1411 aa18.54■□□□□ 0.56
AGRN-201ENST00000379370 PTMAP06454 111 aaKnown RBP18.51■□□□□ 0.55
AGRN-201ENST00000379370 TMX4Q9H1E5 349 aaPredicted RBP18.5■□□□□ 0.55
AGRN-201ENST00000379370 DCAF11Q8TEB1 546 aa18.5■□□□□ 0.55
AGRN-201ENST00000379370 BECN1Q14457 450 aa18.49■□□□□ 0.55
AGRN-201ENST00000379370 CARMIL1Q5VZK9 1371 aa18.49■□□□□ 0.55
AGRN-201ENST00000379370 GOLGA6L22H0YM25 854 aa18.47■□□□□ 0.55
AGRN-201ENST00000379370 G3V3G9 751 aa18.47■□□□□ 0.55
AGRN-201ENST00000379370 DCAF8Q5TAQ9 597 aa18.47■□□□□ 0.55
AGRN-201ENST00000379370 APBB1O00213 710 aa18.46■□□□□ 0.55
AGRN-201ENST00000379370 RGS3P49796 1198 aa18.46■□□□□ 0.55
AGRN-201ENST00000379370 TRIM44Q96DX7 344 aaPredicted RBP18.46■□□□□ 0.55
AGRN-201ENST00000379370 RTF1Q92541 710 aaKnown RBP18.45■□□□□ 0.54
AGRN-201ENST00000379370 SIN3AQ96ST3 1273 aa18.45■□□□□ 0.54
AGRN-201ENST00000379370 DNTTIP2Q5QJE6 756 aaKnown RBP18.44■□□□□ 0.54
AGRN-201ENST00000379370 MIER1Q8N108 512 aa18.44■□□□□ 0.54
AGRN-201ENST00000379370 NUTM2FA1L443 756 aa18.44■□□□□ 0.54
AGRN-201ENST00000379370 PDS5BQ9NTI5 1447 aa18.43■□□□□ 0.54
AGRN-201ENST00000379370 NUTM2DQ5VT03 806 aaPredicted RBP18.42■□□□□ 0.54
AGRN-201ENST00000379370 CARMIL2Q6F5E8 1435 aa18.42■□□□□ 0.54
AGRN-201ENST00000379370 MSH5O43196 834 aa18.41■□□□□ 0.54
AGRN-201ENST00000379370 PHF23Q9BUL5 403 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms