RNA–Protein interactions for RNA: ENST00000379066.5

PRKD3-202, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRKD3, Length 6,111 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-202ENST00000379066 FBXO3Q9UK99 471 aa5.1□□□□□ -1.59
PRKD3-202ENST00000379066 ARID4BQ4LE39 1312 aaPredicted RBP5.09□□□□□ -1.59
PRKD3-202ENST00000379066 IGSF3O75054 1194 aa5.08□□□□□ -1.6
PRKD3-202ENST00000379066 HSP90B1P14625 803 aaKnown RBP5.08□□□□□ -1.6
PRKD3-202ENST00000379066 CNKSR2Q8WXI2 1034 aa5.08□□□□□ -1.6
PRKD3-202ENST00000379066 PRDM10Q9NQV6 1147 aa5.06□□□□□ -1.6
PRKD3-202ENST00000379066 YTHDC1Q96MU7 727 aaKnown RBP5.06□□□□□ -1.6
PRKD3-202ENST00000379066 ARID3AQ99856 593 aa5.06□□□□□ -1.6
PRKD3-202ENST00000379066 ARID3CA6NKF2 412 aa5.06□□□□□ -1.6
PRKD3-202ENST00000379066 ZNF526Q8TF50 670 aaPredicted RBP5.06□□□□□ -1.6
PRKD3-202ENST00000379066 NAP1L2Q9ULW6 460 aaPredicted RBP5.06□□□□□ -1.6
PRKD3-202ENST00000379066 CCDC9Q9Y3X0 531 aaKnown RBP5.06□□□□□ -1.6
PRKD3-202ENST00000379066 PLCB2Q00722 1185 aa5.06□□□□□ -1.6
PRKD3-202ENST00000379066 SLC4A1APQ9BWU0 796 aaKnown RBP5.05□□□□□ -1.6
PRKD3-202ENST00000379066 CHMP4BQ9H444 224 aaKnown RBP5.05□□□□□ -1.6
PRKD3-202ENST00000379066 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.05□□□□□ -1.6
PRKD3-202ENST00000379066 PPP6R1Q9UPN7 881 aa5.05□□□□□ -1.6
PRKD3-202ENST00000379066 PHF23Q9BUL5 403 aaPredicted RBP5.05□□□□□ -1.6
PRKD3-202ENST00000379066 RSPH6AQ9H0K4 717 aa5.04□□□□□ -1.6
PRKD3-202ENST00000379066 CHMP7Q8WUX9 453 aaPredicted RBP5.03□□□□□ -1.6
PRKD3-202ENST00000379066 BRPF3Q9ULD4 1205 aa5.03□□□□□ -1.61
PRKD3-202ENST00000379066 RSPH4AQ5TD94 716 aa5.02□□□□□ -1.61
PRKD3-202ENST00000379066 CNPY4Q8N129 248 aa5.02□□□□□ -1.61
PRKD3-202ENST00000379066 STAG3Q9UJ98 1225 aa5.01□□□□□ -1.61
PRKD3-202ENST00000379066 CCDC180Q9P1Z9 1646 aa5.01□□□□□ -1.61
PRKD3-202ENST00000379066 WWC1Q8IX03 1113 aa5.01□□□□□ -1.61
PRKD3-202ENST00000379066 RTL5Q5HYW3 569 aaPredicted RBP5□□□□□ -1.61
PRKD3-202ENST00000379066 ZFP91Q96JP5 570 aaPredicted RBP5□□□□□ -1.61
PRKD3-202ENST00000379066 BBXQ8WY36 941 aaPredicted RBP5□□□□□ -1.61
PRKD3-202ENST00000379066 IL27Q8NEV9 243 aa5□□□□□ -1.61
PRKD3-202ENST00000379066 TSHZ2Q9NRE2 1034 aa5□□□□□ -1.61
PRKD3-202ENST00000379066 NCLP19338 710 aaKnown RBP4.99□□□□□ -1.61
PRKD3-202ENST00000379066 BCCIPQ9P287 314 aaKnown RBP eCLIP4.99□□□□□ -1.61
PRKD3-202ENST00000379066 ZNF592Q92610 1267 aa4.99□□□□□ -1.61
PRKD3-202ENST00000379066 A0A0G2JS52 829 aa4.99□□□□□ -1.61
PRKD3-202ENST00000379066 CECR2Q9BXF3 1484 aa4.97□□□□□ -1.61
PRKD3-202ENST00000379066 PATL2C9JE40 543 aaKnown RBP4.97□□□□□ -1.61
PRKD3-202ENST00000379066 SECISBP2LQ93073 1101 aaKnown RBP4.96□□□□□ -1.62
PRKD3-202ENST00000379066 USP35Q9P2H5 1018 aa4.95□□□□□ -1.62
PRKD3-202ENST00000379066 CANXP27824 592 aaKnown RBP4.95□□□□□ -1.62
PRKD3-202ENST00000379066 TMED8Q6PL24 325 aaPredicted RBP4.95□□□□□ -1.62
PRKD3-202ENST00000379066 PLCD3Q8N3E9 789 aa4.95□□□□□ -1.62
PRKD3-202ENST00000379066 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.95□□□□□ -1.62
PRKD3-202ENST00000379066 NBR1Q14596 966 aa4.94□□□□□ -1.62
PRKD3-202ENST00000379066 CNGB1Q14028 1251 aaPredicted RBP4.93□□□□□ -1.62
PRKD3-202ENST00000379066 ZNF777Q9ULD5 760 aaPredicted RBP4.93□□□□□ -1.62
PRKD3-202ENST00000379066 KCNH8Q96L42 1107 aa4.93□□□□□ -1.62
PRKD3-202ENST00000379066 IPO4Q8TEX9 1081 aaKnown RBP4.92□□□□□ -1.62
PRKD3-202ENST00000379066 NACADO15069 1562 aa4.92□□□□□ -1.62
PRKD3-202ENST00000379066 ITGAEP38570 1179 aa4.92□□□□□ -1.62
PRKD3-202ENST00000379066 P3H3Q8IVL6 736 aa4.91□□□□□ -1.62
PRKD3-202ENST00000379066 HMGB1P09429 215 aaKnown RBP4.91□□□□□ -1.62
PRKD3-202ENST00000379066 CYB5RLQ6IPT4 315 aa4.91□□□□□ -1.62
PRKD3-202ENST00000379066 ZBTB7CA1YPR0 619 aa4.9□□□□□ -1.62
PRKD3-202ENST00000379066 OS9Q13438 667 aaPredicted RBP4.9□□□□□ -1.62
PRKD3-202ENST00000379066 CHGAP10645 457 aaKnown RBP4.9□□□□□ -1.62
PRKD3-202ENST00000379066 MLECQ14165 292 aa4.9□□□□□ -1.62
PRKD3-202ENST00000379066 MEX3CQ5U5Q3 659 aaKnown RBP4.9□□□□□ -1.62
PRKD3-202ENST00000379066 ZNF428Q96B54 188 aa4.9□□□□□ -1.63
PRKD3-202ENST00000379066 TICAM2Q86XR7 235 aa4.9□□□□□ -1.63
PRKD3-202ENST00000379066 FTSJ3Q8IY81 847 aaKnown RBP4.9□□□□□ -1.63
PRKD3-202ENST00000379066 MAPK8IP2Q13387 824 aaPredicted RBP4.89□□□□□ -1.63
PRKD3-202ENST00000379066 CCER1Q8TC90 406 aaPredicted RBP4.89□□□□□ -1.63
PRKD3-202ENST00000379066 PSMD1Q99460 953 aa4.89□□□□□ -1.63
PRKD3-202ENST00000379066 SMARCA2P51531 1590 aa4.89□□□□□ -1.63
PRKD3-202ENST00000379066 CWC22Q9HCG8 908 aaKnown RBP4.89□□□□□ -1.63
PRKD3-202ENST00000379066 KDM2AQ9Y2K7 1162 aa4.88□□□□□ -1.63
PRKD3-202ENST00000379066 PTMSP20962 102 aa4.88□□□□□ -1.63
PRKD3-202ENST00000379066 DCAF8L1A6NGE4 600 aa4.88□□□□□ -1.63
PRKD3-202ENST00000379066 HSP90AA2PQ14568 343 aaPredicted RBP4.88□□□□□ -1.63
PRKD3-202ENST00000379066 TEX2Q8IWB9 1127 aa4.88□□□□□ -1.63
PRKD3-202ENST00000379066 PLCD4Q9BRC7 762 aa4.88□□□□□ -1.63
PRKD3-202ENST00000379066 APPP05067 770 aa4.87□□□□□ -1.63
PRKD3-202ENST00000379066 BAZ1BQ9UIG0 1483 aaKnown RBP4.87□□□□□ -1.63
PRKD3-202ENST00000379066 OSCARQ8IYS5 282 aa4.86□□□□□ -1.63
PRKD3-202ENST00000379066 KCNG1Q9UIX4 513 aa4.86□□□□□ -1.63
PRKD3-202ENST00000379066 CLSTN1O94985 981 aa4.86□□□□□ -1.63
PRKD3-202ENST00000379066 DIEXFQ68CQ4 756 aaKnown RBP4.86□□□□□ -1.63
PRKD3-202ENST00000379066 SOX12O15370 315 aa4.85□□□□□ -1.63
PRKD3-202ENST00000379066 FAM193AP78312 1265 aa4.85□□□□□ -1.63
PRKD3-202ENST00000379066 FAM43BQ6ZT52 329 aaPredicted RBP4.85□□□□□ -1.63
PRKD3-202ENST00000379066 RBM19Q9Y4C8 960 aaKnown RBP4.85□□□□□ -1.63
PRKD3-202ENST00000379066 PPM1GO15355 546 aaPredicted RBP4.85□□□□□ -1.63
PRKD3-202ENST00000379066 FAM9BQ8IZU0 186 aa4.85□□□□□ -1.63
PRKD3-202ENST00000379066 CERS3Q8IU89 383 aa4.84□□□□□ -1.63
PRKD3-202ENST00000379066 PPP1R15AO75807 674 aaPredicted RBP4.84□□□□□ -1.63
PRKD3-202ENST00000379066 RGS3P49796 1198 aa4.84□□□□□ -1.63
PRKD3-202ENST00000379066 GTF2E1P29083 439 aaPredicted RBP4.84□□□□□ -1.63
PRKD3-202ENST00000379066 SUPT16HQ9Y5B9 1047 aaKnown RBP4.84□□□□□ -1.63
PRKD3-202ENST00000379066 FAM50AQ14320 339 aaKnown RBP4.83□□□□□ -1.64
PRKD3-202ENST00000379066 TRIM52Q96A61 297 aa4.83□□□□□ -1.64
PRKD3-202ENST00000379066 VGLL3A8MV65 326 aa4.83□□□□□ -1.64
PRKD3-202ENST00000379066 EIF4G1Q04637 1599 aaKnown RBP4.82□□□□□ -1.64
PRKD3-202ENST00000379066 RBM25P49756 843 aaKnown RBP4.82□□□□□ -1.64
PRKD3-202ENST00000379066 FOXD1Q16676 465 aa4.82□□□□□ -1.64
PRKD3-202ENST00000379066 PTMAP06454 111 aaKnown RBP4.82□□□□□ -1.64
PRKD3-202ENST00000379066 MSH5O43196 834 aa4.81□□□□□ -1.64
PRKD3-202ENST00000379066 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.81□□□□□ -1.644e-6■□□□□ 8.4
PRKD3-202ENST00000379066 HSP90AA1P07900 732 aaKnown RBP4.81□□□□□ -1.64
PRKD3-202ENST00000379066 PDS5BQ9NTI5 1447 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 236 ms