RNA–Protein interactions for RNA: ENST00000378868.4

CRLS1-202, Transcript of cardiolipin synthase 1, humanhuman

TSL 5 BASIC

Gene CRLS1, Length 994 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLS1-202ENST00000378868 NPM1P06748 294 aaKnown RBP eCLIP13.82□□□□□ -0.2
CRLS1-202ENST00000378868 MNX1P50219 401 aaPredicted RBP13.82□□□□□ -0.2
CRLS1-202ENST00000378868 SLC39A7Q92504 469 aa13.81□□□□□ -0.2
CRLS1-202ENST00000378868 C7P10643 843 aa13.78□□□□□ -0.2
CRLS1-202ENST00000378868 MAMSTRQ6ZN01 415 aa13.75□□□□□ -0.21
CRLS1-202ENST00000378868 SPDYE4A6NLX3 237 aa13.74□□□□□ -0.21
CRLS1-202ENST00000378868 FAM163AQ96GL9 167 aaPredicted RBP13.72□□□□□ -0.21
CRLS1-202ENST00000378868 ATN1P54259 1190 aaPredicted RBP13.68□□□□□ -0.22
CRLS1-202ENST00000378868 SCUBE2Q9NQ36 999 aa13.68□□□□□ -0.22
CRLS1-202ENST00000378868 POTEFA5A3E0 1075 aa13.61□□□□□ -0.23
CRLS1-202ENST00000378868 CSRNP3Q8WYN3 585 aa13.61□□□□□ -0.23
CRLS1-202ENST00000378868 TSPYL2Q9H2G4 693 aaPredicted RBP13.61□□□□□ -0.23
CRLS1-202ENST00000378868 CCDC61Q9Y6R9 512 aa13.58□□□□□ -0.24
CRLS1-202ENST00000378868 BMP2KQ9NSY1 1161 aaPredicted RBP13.55□□□□□ -0.24
CRLS1-202ENST00000378868 TRPC6Q9Y210 931 aa13.55□□□□□ -0.24
CRLS1-202ENST00000378868 KIF12Q96FN5 646 aa13.52□□□□□ -0.25
CRLS1-202ENST00000378868 CDAN1Q8IWY9 1227 aa13.48□□□□□ -0.25
CRLS1-202ENST00000378868 COLQQ9Y215 455 aaPredicted RBP13.45□□□□□ -0.26
CRLS1-202ENST00000378868 TIE1P35590 1138 aa13.44□□□□□ -0.26
CRLS1-202ENST00000378868 MAP3K13O43283 966 aa13.43□□□□□ -0.26
CRLS1-202ENST00000378868 SEC24BO95487 1268 aa13.38□□□□□ -0.27
CRLS1-202ENST00000378868 TTLL13PA6NNM8 815 aa13.37□□□□□ -0.27
CRLS1-202ENST00000378868 RASEFQ8IZ41 740 aa13.31□□□□□ -0.28
CRLS1-202ENST00000378868 ST18O60284 1047 aa13.3□□□□□ -0.28
CRLS1-202ENST00000378868 TRIM35Q9UPQ4 493 aa13.3□□□□□ -0.28
CRLS1-202ENST00000378868 PROM2Q8N271 834 aa13.29□□□□□ -0.28
CRLS1-202ENST00000378868 SLAIN1Q8ND83 568 aa13.28□□□□□ -0.28
CRLS1-202ENST00000378868 IER5LQ5T953 404 aa13.26□□□□□ -0.29
CRLS1-202ENST00000378868 MMRN1Q13201 1228 aa13.2□□□□□ -0.3
CRLS1-202ENST00000378868 PCDHB13Q9Y5F0 798 aa13.19□□□□□ -0.3
CRLS1-202ENST00000378868 PLEKHG5O94827 1062 aa13.17□□□□□ -0.3
CRLS1-202ENST00000378868 SPNS2Q8IVW8 549 aa13.17□□□□□ -0.3
CRLS1-202ENST00000378868 MIER1Q8N108 512 aa13.16□□□□□ -0.3
CRLS1-202ENST00000378868 SGIP1Q9BQI5 828 aa13.15□□□□□ -0.3
CRLS1-202ENST00000378868 PLCG2P16885 1265 aa13.11□□□□□ -0.31
CRLS1-202ENST00000378868 IFNL1Q8IU54 200 aa13.11□□□□□ -0.31
CRLS1-202ENST00000378868 EHMT2Q96KQ7 1210 aa13.11□□□□□ -0.31
CRLS1-202ENST00000378868 TMEM106CQ9BVX2 250 aa13.09□□□□□ -0.31
CRLS1-202ENST00000378868 IRX5P78411 483 aaPredicted RBP13.06□□□□□ -0.32
CRLS1-202ENST00000378868 TMEM121BQ9BXQ6 578 aaPredicted RBP13.06□□□□□ -0.32
CRLS1-202ENST00000378868 MARVELD3Q96A59 401 aa13.04□□□□□ -0.32
CRLS1-202ENST00000378868 NUBP1P53384 320 aa13.01□□□□□ -0.33
CRLS1-202ENST00000378868 PLCD3Q8N3E9 789 aa12.99□□□□□ -0.33
CRLS1-202ENST00000378868 SNPHO15079 494 aa12.97□□□□□ -0.33
CRLS1-202ENST00000378868 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.95□□□□□ -0.34
CRLS1-202ENST00000378868 OCEL1Q9H607 264 aa12.94□□□□□ -0.34
CRLS1-202ENST00000378868 FAM212AQ96EL1 285 aa12.92□□□□□ -0.34
CRLS1-202ENST00000378868 ZBTB47Q9UFB7 747 aaPredicted RBP12.89□□□□□ -0.35
CRLS1-202ENST00000378868 EMP3P54852 163 aa12.86□□□□□ -0.35
CRLS1-202ENST00000378868 KRTAP3-3Q9BYR6 98 aa12.85□□□□□ -0.35
CRLS1-202ENST00000378868 KRTAP3-2Q9BYR7 98 aa12.85□□□□□ -0.35
CRLS1-202ENST00000378868 POTEB3A0JP26 581 aa12.82□□□□□ -0.36
CRLS1-202ENST00000378868 POTEBQ6S5H4 581 aa12.82□□□□□ -0.36
CRLS1-202ENST00000378868 HS3ST6Q96QI5 342 aa12.81□□□□□ -0.36
CRLS1-202ENST00000378868 PYGBP11216 843 aa12.79□□□□□ -0.36
CRLS1-202ENST00000378868 PCDHB8Q9UN66 801 aa12.79□□□□□ -0.36
CRLS1-202ENST00000378868 FAM205CA6NFA0 338 aa12.78□□□□□ -0.36
CRLS1-202ENST00000378868 C3orf67Q6ZVT6 689 aa12.77□□□□□ -0.37
CRLS1-202ENST00000378868 PDCD7Q8N8D1 485 aaKnown RBP12.77□□□□□ -0.37
CRLS1-202ENST00000378868 DCAF8Q5TAQ9 597 aa12.72□□□□□ -0.37
CRLS1-202ENST00000378868 L3MBTL3Q96JM7 780 aaPredicted RBP12.67□□□□□ -0.38
CRLS1-202ENST00000378868 GOLGA2Q08379 1002 aa12.63□□□□□ -0.39
CRLS1-202ENST00000378868 MKRN3Q13064 507 aaKnown RBP12.63□□□□□ -0.39
CRLS1-202ENST00000378868 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.59□□□□□ -0.39
CRLS1-202ENST00000378868 HOXB3P14651 431 aaPredicted RBP12.55□□□□□ -0.4
CRLS1-202ENST00000378868 ZNF467Q7Z7K2 595 aaPredicted RBP12.55□□□□□ -0.4
CRLS1-202ENST00000378868 RNF166Q96A37 237 aaPredicted RBP12.54□□□□□ -0.4
CRLS1-202ENST00000378868 DPY19L2Q6NUT2 758 aa12.51□□□□□ -0.41
CRLS1-202ENST00000378868 HOXB1P14653 301 aaPredicted RBP12.48□□□□□ -0.41
CRLS1-202ENST00000378868 PSEN1P49768 467 aa12.48□□□□□ -0.41
CRLS1-202ENST00000378868 ILDR1Q86SU0 546 aaPredicted RBP12.48□□□□□ -0.41
CRLS1-202ENST00000378868 ERBB3P21860 1342 aa12.47□□□□□ -0.41
CRLS1-202ENST00000378868 ZNF710Q8N1W2 664 aa12.45□□□□□ -0.42
CRLS1-202ENST00000378868 GSE1Q14687 1217 aa12.42□□□□□ -0.42
CRLS1-202ENST00000378868 MYT1LQ9UL68 1186 aa12.42□□□□□ -0.42
CRLS1-202ENST00000378868 BOLA1Q9Y3E2 137 aa12.42□□□□□ -0.42
CRLS1-202ENST00000378868 G3V3G9 751 aa12.41□□□□□ -0.42
CRLS1-202ENST00000378868 FKBP8Q14318 412 aa12.41□□□□□ -0.42
CRLS1-202ENST00000378868 DOK7Q18PE1 504 aa12.4□□□□□ -0.42
CRLS1-202ENST00000378868 CHRM1P11229 460 aaPredicted RBP12.38□□□□□ -0.43
CRLS1-202ENST00000378868 VARS2Q5ST30 1063 aaKnown RBP12.38□□□□□ -0.43
CRLS1-202ENST00000378868 CABP2Q9NPB3 220 aa12.36□□□□□ -0.43
CRLS1-202ENST00000378868 PDAP1Q13442 181 aaKnown RBP12.34□□□□□ -0.43
CRLS1-202ENST00000378868 KLHL34Q8N239 644 aa12.32□□□□□ -0.44
CRLS1-202ENST00000378868 RIMBP2O15034 1052 aa12.3□□□□□ -0.44
CRLS1-202ENST00000378868 ZNF687Q8N1G0 1237 aa12.28□□□□□ -0.44
CRLS1-202ENST00000378868 FBXO3Q9UK99 471 aa12.27□□□□□ -0.45
CRLS1-202ENST00000378868 PTGER2P43116 358 aa12.22□□□□□ -0.45
CRLS1-202ENST00000378868 VASPP50552 380 aaPredicted RBP12.21□□□□□ -0.45
CRLS1-202ENST00000378868 TMEM92Q6UXU6 159 aa12.21□□□□□ -0.45
CRLS1-202ENST00000378868 ZSWIM6Q9HCJ5 1215 aa12.2□□□□□ -0.46
CRLS1-202ENST00000378868 GPR153Q6NV75 609 aa12.19□□□□□ -0.46
CRLS1-202ENST00000378868 ANKRD13DQ6ZTN6 518 aa12.16□□□□□ -0.46
CRLS1-202ENST00000378868 MICALL2Q8IY33 904 aa12.15□□□□□ -0.46
CRLS1-202ENST00000378868 EFCAB3Q8N7B9 438 aa12.14□□□□□ -0.47
CRLS1-202ENST00000378868 CIZ1Q9ULV3 898 aaPredicted RBP12.1□□□□□ -0.47
CRLS1-202ENST00000378868 ARSIQ5FYB1 569 aa12.09□□□□□ -0.47
CRLS1-202ENST00000378868 LSM11P83369 360 aaKnown RBP eCLIP12.07□□□□□ -0.48
CRLS1-202ENST00000378868 KHSRPQ92945 711 aaKnown RBP eCLIP12.05□□□□□ -0.484e-7■■■■□ 23.2
CRLS1-202ENST00000378868 ZNF316A6NFI3 1004 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms