RNA–Protein interactions for RNA: ENST00000376893.7

SSX3-202, Transcript of SSX family member 3, humanhuman

TSL 2 BASIC

Gene SSX3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-202ENST00000376893 CAPN15O75808 1086 aa11.07□□□□□ -0.64
SSX3-202ENST00000376893 PLCD3Q8N3E9 789 aa11.05□□□□□ -0.64
SSX3-202ENST00000376893 MYO15BQ96JP2 1530 aa11.03□□□□□ -0.64
SSX3-202ENST00000376893 DCAF1Q9Y4B6 1507 aa11□□□□□ -0.65
SSX3-202ENST00000376893 ZBTB47Q9UFB7 747 aaPredicted RBP11□□□□□ -0.65
SSX3-202ENST00000376893 UNC13AQ9UPW8 1703 aa10.95□□□□□ -0.66
SSX3-202ENST00000376893 SP7Q8TDD2 431 aaPredicted RBP10.95□□□□□ -0.66
SSX3-202ENST00000376893 ABCB7O75027 752 aa10.93□□□□□ -0.66
SSX3-202ENST00000376893 C14orf37Q86TY3 774 aa10.93□□□□□ -0.66
SSX3-202ENST00000376893 MIER1Q8N108 512 aa10.93□□□□□ -0.66
SSX3-202ENST00000376893 CIZ1Q9ULV3 898 aaPredicted RBP10.93□□□□□ -0.66
SSX3-202ENST00000376893 SCRIBQ14160 1630 aa10.92□□□□□ -0.66
SSX3-202ENST00000376893 PLEKHG5O94827 1062 aa10.89□□□□□ -0.67
SSX3-202ENST00000376893 SSUH2Q9Y2M2 353 aa10.88□□□□□ -0.67
SSX3-202ENST00000376893 ZNF692Q9BU19 519 aaPredicted RBP10.87□□□□□ -0.67
SSX3-202ENST00000376893 SPDYE2BA6NHP3 402 aa10.86□□□□□ -0.67
SSX3-202ENST00000376893 SPDYE6P0CI01 402 aa10.86□□□□□ -0.67
SSX3-202ENST00000376893 SPDYE2Q495Y8 402 aa10.86□□□□□ -0.67
SSX3-202ENST00000376893 BICRAQ9NZM4 1560 aa10.86□□□□□ -0.67
SSX3-202ENST00000376893 GTPBP6O43824 516 aaPredicted RBP10.85□□□□□ -0.67
SSX3-202ENST00000376893 NKX1-1Q15270 411 aaPredicted RBP10.83□□□□□ -0.68
SSX3-202ENST00000376893 P3H3Q8IVL6 736 aa10.83□□□□□ -0.68
SSX3-202ENST00000376893 DSG3P32926 999 aa10.81□□□□□ -0.68
SSX3-202ENST00000376893 GSE1Q14687 1217 aa10.81□□□□□ -0.68
SSX3-202ENST00000376893 PABPN1Q86U42 306 aaKnown RBP eCLIP10.81□□□□□ -0.68
SSX3-202ENST00000376893 RYDENQ9NUL5 291 aaKnown RBP10.81□□□□□ -0.68
SSX3-202ENST00000376893 RNF25Q96BH1 459 aaPredicted RBP10.8□□□□□ -0.68
SSX3-202ENST00000376893 RIOK3O14730 519 aaKnown RBP10.76□□□□□ -0.69
SSX3-202ENST00000376893 OSCARQ8IYS5 282 aa10.73□□□□□ -0.69
SSX3-202ENST00000376893 SGIP1Q9BQI5 828 aa10.71□□□□□ -0.69
SSX3-202ENST00000376893 VGFO15240 615 aaPredicted RBP10.69□□□□□ -0.7
SSX3-202ENST00000376893 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.69□□□□□ -0.7
SSX3-202ENST00000376893 SHROOM4Q9ULL8 1493 aa10.68□□□□□ -0.7
SSX3-202ENST00000376893 BRPF1P55201 1214 aaPredicted RBP10.67□□□□□ -0.7
SSX3-202ENST00000376893 LMOD2Q6P5Q4 547 aa10.67□□□□□ -0.7
SSX3-202ENST00000376893 STK25O00506 426 aa10.66□□□□□ -0.7
SSX3-202ENST00000376893 CHRM1P11229 460 aaPredicted RBP10.63□□□□□ -0.71
SSX3-202ENST00000376893 NUBP1P53384 320 aa10.62□□□□□ -0.71
SSX3-202ENST00000376893 KCNV2Q8TDN2 545 aa10.57□□□□□ -0.72
SSX3-202ENST00000376893 EIF4G1Q04637 1599 aaKnown RBP10.56□□□□□ -0.72
SSX3-202ENST00000376893 WDR70Q9NW82 654 aa10.55□□□□□ -0.72
SSX3-202ENST00000376893 DCAF8Q5TAQ9 597 aa10.53□□□□□ -0.72
SSX3-202ENST00000376893 RANGAP1P46060 587 aaPredicted RBP10.52□□□□□ -0.73
SSX3-202ENST00000376893 FAM212AQ96EL1 285 aa10.52□□□□□ -0.73
SSX3-202ENST00000376893 BCL11BQ9C0K0 894 aaPredicted RBP10.52□□□□□ -0.73
SSX3-202ENST00000376893 CC2D2AQ9P2K1 1620 aa10.51□□□□□ -0.73
SSX3-202ENST00000376893 SUPT5HO00267 1087 aaKnown RBP10.51□□□□□ -0.73
SSX3-202ENST00000376893 PODXL2Q9NZ53 605 aa10.51□□□□□ -0.73
SSX3-202ENST00000376893 STK24Q9Y6E0 443 aa10.51□□□□□ -0.73
SSX3-202ENST00000376893 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.49□□□□□ -0.73
SSX3-202ENST00000376893 NEUROD2Q15784 382 aa10.49□□□□□ -0.73
SSX3-202ENST00000376893 ZC3H15Q8WU90 426 aaKnown RBP10.49□□□□□ -0.73
SSX3-202ENST00000376893 ZFP91Q96JP5 570 aaPredicted RBP10.49□□□□□ -0.73
SSX3-202ENST00000376893 ARHGEF1Q92888 912 aaKnown RBP10.48□□□□□ -0.73
SSX3-202ENST00000376893 CECR2Q9BXF3 1484 aa10.42□□□□□ -0.74
SSX3-202ENST00000376893 CADPS2Q86UW7 1296 aa10.4□□□□□ -0.74
SSX3-202ENST00000376893 SMARCA4P51532 1647 aa10.4□□□□□ -0.75
SSX3-202ENST00000376893 TESPA1A2RU30 521 aaPredicted RBP10.39□□□□□ -0.75
SSX3-202ENST00000376893 SLC24A3Q9HC58 644 aa10.39□□□□□ -0.75
SSX3-202ENST00000376893 ZMYND10O75800 440 aa10.36□□□□□ -0.75
SSX3-202ENST00000376893 ZMYND15Q9H091 742 aa10.35□□□□□ -0.75
SSX3-202ENST00000376893 RSPH6AQ9H0K4 717 aa10.34□□□□□ -0.75
SSX3-202ENST00000376893 BAZ1AQ9NRL2 1556 aaPredicted RBP10.34□□□□□ -0.75
SSX3-202ENST00000376893 UBTFP17480 764 aaKnown RBP10.33□□□□□ -0.76
SSX3-202ENST00000376893 MNX1P50219 401 aaPredicted RBP10.33□□□□□ -0.76
SSX3-202ENST00000376893 MROH2BQ7Z745 1585 aa10.32□□□□□ -0.76
SSX3-202ENST00000376893 E2F4Q16254 413 aa10.32□□□□□ -0.76
SSX3-202ENST00000376893 SMYD5Q6GMV2 418 aa10.32□□□□□ -0.76
SSX3-202ENST00000376893 BARGINQ6ZT62 677 aa10.29□□□□□ -0.76
SSX3-202ENST00000376893 RASEFQ8IZ41 740 aa10.29□□□□□ -0.76
SSX3-202ENST00000376893 ATAD2BQ9ULI0 1458 aa10.29□□□□□ -0.76
SSX3-202ENST00000376893 CREBZFQ9NS37 354 aa10.28□□□□□ -0.76
SSX3-202ENST00000376893 SPDYE1Q8NFV5 336 aaPredicted RBP10.27□□□□□ -0.77
SSX3-202ENST00000376893 SEMA3EO15041 775 aa10.26□□□□□ -0.77
SSX3-202ENST00000376893 TRIM26Q12899 539 aaPredicted RBP10.26□□□□□ -0.77
SSX3-202ENST00000376893 ZNF467Q7Z7K2 595 aaPredicted RBP10.26□□□□□ -0.77
SSX3-202ENST00000376893 AKT1S1Q96B36 256 aa10.26□□□□□ -0.77
SSX3-202ENST00000376893 HMGXB3Q12766 1538 aa10.26□□□□□ -0.77
SSX3-202ENST00000376893 SMARCA2P51531 1590 aa10.26□□□□□ -0.77
SSX3-202ENST00000376893 PEG3Q9GZU2 1588 aa10.26□□□□□ -0.77
SSX3-202ENST00000376893 LHX8Q68G74 356 aa10.25□□□□□ -0.77
SSX3-202ENST00000376893 ARIH1Q9Y4X5 557 aaPredicted RBP10.25□□□□□ -0.77
SSX3-202ENST00000376893 PYGBP11216 843 aa10.24□□□□□ -0.77
SSX3-202ENST00000376893 RBM42Q9BTD8 480 aaKnown RBP10.24□□□□□ -0.77
SSX3-202ENST00000376893 AK7Q96M32 723 aa10.23□□□□□ -0.77
SSX3-202ENST00000376893 NCAPD3P42695 1498 aa10.23□□□□□ -0.77
SSX3-202ENST00000376893 BAZ1BQ9UIG0 1483 aaKnown RBP10.23□□□□□ -0.77
SSX3-202ENST00000376893 WIZO95785 1651 aa10.22□□□□□ -0.77
SSX3-202ENST00000376893 PDAP1Q13442 181 aaKnown RBP10.21□□□□□ -0.77
SSX3-202ENST00000376893 MFRPQ9BY79 579 aa10.2□□□□□ -0.78
SSX3-202ENST00000376893 CHRDL2Q6WN34 429 aa10.19□□□□□ -0.78
SSX3-202ENST00000376893 NPM2Q86SE8 214 aaKnown RBP10.19□□□□□ -0.78
SSX3-202ENST00000376893 PRR29P0C7W0 189 aa10.17□□□□□ -0.78
SSX3-202ENST00000376893 HRCP23327 699 aa10.17□□□□□ -0.78
SSX3-202ENST00000376893 REM2Q8IYK8 340 aaPredicted RBP10.17□□□□□ -0.78
SSX3-202ENST00000376893 CLEC11AQ9Y240 323 aa10.17□□□□□ -0.78
SSX3-202ENST00000376893 RSF1Q96T23 1441 aaPredicted RBP10.16□□□□□ -0.78
SSX3-202ENST00000376893 KDM4CQ9H3R0 1056 aa10.13□□□□□ -0.79
SSX3-202ENST00000376893 MFSD10Q14728 455 aa10.12□□□□□ -0.79
SSX3-202ENST00000376893 GPBP1L1Q9HC44 474 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms