RNA–Protein interactions for RNA: ENST00000375835.8

SHC3-202, Transcript of SHC adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHC3, Length 9,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3-202ENST00000375835 PPP4R2Q9NY27 417 aa23.24■■□□□ 1.31
SHC3-202ENST00000375835 SCRIBQ14160 1630 aa23.23■■□□□ 1.31
SHC3-202ENST00000375835 USP35Q9P2H5 1018 aa23.23■■□□□ 1.31
SHC3-202ENST00000375835 MS4A1P11836 297 aa23.21■■□□□ 1.31
SHC3-202ENST00000375835 FTSJ3Q8IY81 847 aaKnown RBP23.21■■□□□ 1.31
SHC3-202ENST00000375835 ARID4BQ4LE39 1312 aaPredicted RBP23.2■■□□□ 1.3
SHC3-202ENST00000375835 EIF4G2P78344 907 aaKnown RBP eCLIP23.2■■□□□ 1.3
SHC3-202ENST00000375835 MIER1Q8N108 512 aa23.19■■□□□ 1.3
SHC3-202ENST00000375835 ESF1Q9H501 851 aaKnown RBP23.18■■□□□ 1.3
SHC3-202ENST00000375835 CDCA8Q53HL2 280 aa23.16■■□□□ 1.3
SHC3-202ENST00000375835 EEA1Q15075 1411 aa23.14■■□□□ 1.3
SHC3-202ENST00000375835 HSP90AB1P08238 724 aaKnown RBP23.14■■□□□ 1.29
SHC3-202ENST00000375835 HSCBQ8IWL3 235 aa23.14■■□□□ 1.29
SHC3-202ENST00000375835 DEKP35659 375 aaKnown RBP23.12■■□□□ 1.29
SHC3-202ENST00000375835 STAG3Q9UJ98 1225 aa23.1■■□□□ 1.29
SHC3-202ENST00000375835 CFAP53Q96M91 514 aa23.09■■□□□ 1.29
SHC3-202ENST00000375835 RSF1Q96T23 1441 aaPredicted RBP23.09■■□□□ 1.29
SHC3-202ENST00000375835 KIAA2012Q0VF49 1180 aa23.08■■□□□ 1.29
SHC3-202ENST00000375835 TNNT3P45378 269 aaPredicted RBP23.08■■□□□ 1.28
SHC3-202ENST00000375835 ZNF777Q9ULD5 760 aaPredicted RBP23.07■■□□□ 1.28
SHC3-202ENST00000375835 SALL2Q9Y467 1007 aaPredicted RBP23.07■■□□□ 1.28
SHC3-202ENST00000375835 IRX6P78412 446 aaPredicted RBP23.05■■□□□ 1.28
SHC3-202ENST00000375835 RTN4Q9NQC3 1192 aaKnown RBP23.05■■□□□ 1.28
SHC3-202ENST00000375835 CLIP1P30622 1438 aa23.04■■□□□ 1.28
SHC3-202ENST00000375835 LAS1LQ9Y4W2 734 aaKnown RBP23.04■■□□□ 1.28
SHC3-202ENST00000375835 SYAP1Q96A49 352 aaPredicted RBP23.04■■□□□ 1.28
SHC3-202ENST00000375835 GOLGA3Q08378 1498 aa23.02■■□□□ 1.28
SHC3-202ENST00000375835 RSPH6AQ9H0K4 717 aa23.02■■□□□ 1.28
SHC3-202ENST00000375835 GBP4Q96PP9 640 aa23.02■■□□□ 1.28
SHC3-202ENST00000375835 MCCP23508 829 aa23.02■■□□□ 1.28
SHC3-202ENST00000375835 GOLGA6L4A6NEF3 574 aa23.01■■□□□ 1.27
SHC3-202ENST00000375835 MTUS2Q5JR59 1369 aa23■■□□□ 1.27
SHC3-202ENST00000375835 GOLGA6L1Q8N7Z2 621 aa22.99■■□□□ 1.27
SHC3-202ENST00000375835 PNNQ9H307 717 aaKnown RBP22.98■■□□□ 1.27
SHC3-202ENST00000375835 DRC7Q8IY82 874 aa22.97■■□□□ 1.27
SHC3-202ENST00000375835 KNSTRNQ9Y448 316 aa22.95■■□□□ 1.26
SHC3-202ENST00000375835 SUPT16HQ9Y5B9 1047 aaKnown RBP22.95■■□□□ 1.26
SHC3-202ENST00000375835 SETQ01105 290 aaPredicted RBP22.94■■□□□ 1.26
SHC3-202ENST00000375835 FBLN2P98095 1184 aa22.91■■□□□ 1.26
SHC3-202ENST00000375835 PLCB2Q00722 1185 aa22.91■■□□□ 1.26
SHC3-202ENST00000375835 PHF14O94880 888 aa22.9■■□□□ 1.26
SHC3-202ENST00000375835 HTATSF1O43719 755 aaKnown RBP22.88■■□□□ 1.25
SHC3-202ENST00000375835 ZCCHC6Q5VYS8 1495 aaKnown RBP22.87■■□□□ 1.25
SHC3-202ENST00000375835 FGD1P98174 961 aa22.85■■□□□ 1.25
SHC3-202ENST00000375835 NOC3LQ8WTT2 800 aaKnown RBP22.84■■□□□ 1.25
SHC3-202ENST00000375835 P3H3Q8IVL6 736 aa22.84■■□□□ 1.25
SHC3-202ENST00000375835 HSP90AA2PQ14568 343 aaPredicted RBP22.82■■□□□ 1.24
SHC3-202ENST00000375835 CHGAP10645 457 aaKnown RBP22.82■■□□□ 1.24
SHC3-202ENST00000375835 TSPY4P0CV99 314 aa22.82■■□□□ 1.24
SHC3-202ENST00000375835 TSPY10P0CW01 314 aa22.82■■□□□ 1.24
SHC3-202ENST00000375835 TPM4P67936 248 aa22.82■■□□□ 1.24
SHC3-202ENST00000375835 MAPK8IP3Q9UPT6 1336 aa22.81■■□□□ 1.24
SHC3-202ENST00000375835 CEP162Q5TB80 1403 aa22.81■■□□□ 1.24
SHC3-202ENST00000375835 CSPP1Q1MSJ5 1256 aa22.8■■□□□ 1.24
SHC3-202ENST00000375835 CCER2I3L3R5 266 aa22.78■■□□□ 1.24
SHC3-202ENST00000375835 HAP1P54257 671 aaPredicted RBP22.78■■□□□ 1.24
SHC3-202ENST00000375835 KCNJ4P48050 445 aa22.77■■□□□ 1.24
SHC3-202ENST00000375835 CCDC34Q96HJ3 373 aa22.77■■□□□ 1.24
SHC3-202ENST00000375835 RGS3P49796 1198 aa22.76■■□□□ 1.23
SHC3-202ENST00000375835 GOLGA6L3A6NEY3 463 aa22.76■■□□□ 1.23
SHC3-202ENST00000375835 NUDCQ9Y266 331 aa22.76■■□□□ 1.23
SHC3-202ENST00000375835 ABCC9O60706 1549 aa22.75■■□□□ 1.23
SHC3-202ENST00000375835 CEP164Q9UPV0 1460 aa22.75■■□□□ 1.23
SHC3-202ENST00000375835 RBM19Q9Y4C8 960 aaKnown RBP22.74■■□□□ 1.23
SHC3-202ENST00000375835 CALRP27797 417 aaKnown RBP22.74■■□□□ 1.23
SHC3-202ENST00000375835 TCERG1O14776 1098 aaKnown RBP22.71■■□□□ 1.23
SHC3-202ENST00000375835 KDM2AQ9Y2K7 1162 aa22.7■■□□□ 1.22
SHC3-202ENST00000375835 AMER1Q5JTC6 1135 aaPredicted RBP22.68■■□□□ 1.22
SHC3-202ENST00000375835 DDX11L8A8MPP1 907 aa22.67■■□□□ 1.22
SHC3-202ENST00000375835 ARID3CA6NKF2 412 aa22.67■■□□□ 1.22
SHC3-202ENST00000375835 GNL2Q13823 731 aaKnown RBP22.66■■□□□ 1.22
SHC3-202ENST00000375835 OS9Q13438 667 aaPredicted RBP22.66■■□□□ 1.22
SHC3-202ENST00000375835 A0A0U1RQG5 324 aaPredicted RBP22.66■■□□□ 1.22
SHC3-202ENST00000375835 TIMELESSQ9UNS1 1208 aa22.66■■□□□ 1.22
SHC3-202ENST00000375835 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.64■■□□□ 1.22
SHC3-202ENST00000375835 TPRNQ4KMQ1 711 aa22.63■■□□□ 1.21
SHC3-202ENST00000375835 GPS2Q13227 327 aa22.63■■□□□ 1.21
SHC3-202ENST00000375835 IPO9Q96P70 1041 aaKnown RBP22.62■■□□□ 1.21
SHC3-202ENST00000375835 KIAA1211Q6ZU35 1233 aa22.62■■□□□ 1.21
SHC3-202ENST00000375835 FHAD1B1AJZ9 1412 aa22.61■■□□□ 1.21
SHC3-202ENST00000375835 CHIC2Q9UKJ5 165 aa22.6■■□□□ 1.21
SHC3-202ENST00000375835 IPO8O15397 1037 aaKnown RBP22.59■■□□□ 1.21
SHC3-202ENST00000375835 NPM1P06748 294 aaKnown RBP eCLIP22.58■■□□□ 1.21
SHC3-202ENST00000375835 RB1CC1Q8TDY2 1594 aa22.57■■□□□ 1.2
SHC3-202ENST00000375835 B4GALNT3Q6L9W6 998 aa22.57■■□□□ 1.2
SHC3-202ENST00000375835 PHLDB1Q86UU1 1377 aa22.56■■□□□ 1.2
SHC3-202ENST00000375835 MTERF4Q7Z6M4 381 aaKnown RBP22.56■■□□□ 1.2
SHC3-202ENST00000375835 CALD1Q05682 793 aaKnown RBP22.55■■□□□ 1.2
SHC3-202ENST00000375835 FRAT1Q92837 279 aaPredicted RBP22.55■■□□□ 1.2
SHC3-202ENST00000375835 GOLGA2Q08379 1002 aa22.55■■□□□ 1.2
SHC3-202ENST00000375835 SKOR2Q2VWA4 1001 aaPredicted RBP22.54■■□□□ 1.2
SHC3-202ENST00000375835 CARD11Q9BXL7 1154 aa22.54■■□□□ 1.2
SHC3-202ENST00000375835 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.54■■□□□ 1.2
SHC3-202ENST00000375835 NOM1Q5C9Z4 860 aaKnown RBP22.54■■□□□ 1.2
SHC3-202ENST00000375835 TEX35Q5T0J7 233 aa22.54■■□□□ 1.2
SHC3-202ENST00000375835 KTN1Q86UP2 1357 aaKnown RBP22.54■■□□□ 1.2
SHC3-202ENST00000375835 CCDC70Q6NSX1 233 aa22.53■■□□□ 1.2
SHC3-202ENST00000375835 NAP1L2Q9ULW6 460 aaPredicted RBP22.52■■□□□ 1.2
SHC3-202ENST00000375835 CHMP4AQ9BY43 222 aa22.5■■□□□ 1.19
SHC3-202ENST00000375835 PPP1R15AO75807 674 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms