RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 CHMP7Q8WUX9 453 aaPredicted RBP23.83■■□□□ 1.4
COL16A1-203ENST00000373672 RSF1Q96T23 1441 aaPredicted RBP23.81■■□□□ 1.4
COL16A1-203ENST00000373672 BECN1Q14457 450 aa23.81■■□□□ 1.4
COL16A1-203ENST00000373672 RRP7BPQ9NSQ0 103 aa23.81■■□□□ 1.4
COL16A1-203ENST00000373672 SCAF1Q9H7N4 1312 aaKnown RBP23.78■■□□□ 1.4
COL16A1-203ENST00000373672 GOLGA3Q08378 1498 aa23.76■■□□□ 1.39
COL16A1-203ENST00000373672 EEA1Q15075 1411 aa23.75■■□□□ 1.39
COL16A1-203ENST00000373672 NCLP19338 710 aaKnown RBP23.71■■□□□ 1.39
COL16A1-203ENST00000373672 ANP32EQ9BTT0 268 aa23.7■■□□□ 1.38
COL16A1-203ENST00000373672 CEP162Q5TB80 1403 aa23.69■■□□□ 1.38
COL16A1-203ENST00000373672 PPP1R15AO75807 674 aaPredicted RBP23.69■■□□□ 1.38
COL16A1-203ENST00000373672 CFAP53Q96M91 514 aa23.68■■□□□ 1.38
COL16A1-203ENST00000373672 GOLGA6L22H0YM25 854 aa23.67■■□□□ 1.38
COL16A1-203ENST00000373672 CDK11BP21127 795 aaKnown RBP23.66■■□□□ 1.38
COL16A1-203ENST00000373672 CDCA8Q53HL2 280 aa23.66■■□□□ 1.38
COL16A1-203ENST00000373672 PLEKHD1A6NEE1 506 aa23.66■■□□□ 1.38
COL16A1-203ENST00000373672 ZBTB7CA1YPR0 619 aa23.65■■□□□ 1.38
COL16A1-203ENST00000373672 TRIM44Q96DX7 344 aaPredicted RBP23.63■■□□□ 1.37
COL16A1-203ENST00000373672 C14orf37Q86TY3 774 aa23.62■■□□□ 1.37
COL16A1-203ENST00000373672 CCDC180Q9P1Z9 1646 aa23.62■■□□□ 1.37
COL16A1-203ENST00000373672 KNSTRNQ9Y448 316 aa23.61■■□□□ 1.37
COL16A1-203ENST00000373672 KCNH8Q96L42 1107 aa23.6■■□□□ 1.37
COL16A1-203ENST00000373672 A0A0G2JS52 829 aa23.6■■□□□ 1.37
COL16A1-203ENST00000373672 RGL3Q3MIN7 710 aa23.59■■□□□ 1.37
COL16A1-203ENST00000373672 CASC1Q6TDU7 716 aa23.56■■□□□ 1.36
COL16A1-203ENST00000373672 SENP3Q9H4L4 574 aaPredicted RBP23.54■■□□□ 1.36
COL16A1-203ENST00000373672 CARD11Q9BXL7 1154 aa23.54■■□□□ 1.36
COL16A1-203ENST00000373672 FTSJ3Q8IY81 847 aaKnown RBP23.53■■□□□ 1.36
COL16A1-203ENST00000373672 CFDP1Q9UEE9 299 aaPredicted RBP23.52■■□□□ 1.36
COL16A1-203ENST00000373672 WRNQ14191 1432 aaPredicted RBP eCLIP23.51■■□□□ 1.35
COL16A1-203ENST00000373672 SUPT16HQ9Y5B9 1047 aaKnown RBP23.5■■□□□ 1.35
COL16A1-203ENST00000373672 MYO15BQ96JP2 1530 aa23.49■■□□□ 1.35
COL16A1-203ENST00000373672 RB1CC1Q8TDY2 1594 aa23.49■■□□□ 1.35
COL16A1-203ENST00000373672 PLEKHG5O94827 1062 aa23.49■■□□□ 1.35
COL16A1-203ENST00000373672 PPM1GO15355 546 aaPredicted RBP23.48■■□□□ 1.35
COL16A1-203ENST00000373672 TNIKQ9UKE5 1360 aa23.48■■□□□ 1.35
COL16A1-203ENST00000373672 CEP164Q9UPV0 1460 aa23.47■■□□□ 1.35
COL16A1-203ENST00000373672 KIF27Q86VH2 1401 aa23.47■■□□□ 1.35
COL16A1-203ENST00000373672 MAPK8IP3Q9UPT6 1336 aa23.46■■□□□ 1.35
COL16A1-203ENST00000373672 ZRSR1Q15695 479 aaKnown RBP23.46■■□□□ 1.35
COL16A1-203ENST00000373672 PTMAP06454 111 aaKnown RBP23.44■■□□□ 1.34
COL16A1-203ENST00000373672 PPP4R2Q9NY27 417 aa23.43■■□□□ 1.34
COL16A1-203ENST00000373672 NUDCQ9Y266 331 aa23.42■■□□□ 1.34
COL16A1-203ENST00000373672 SENP3-EIF4A1A0A087X0R7 540 aa23.41■■□□□ 1.34
COL16A1-203ENST00000373672 BAZ1BQ9UIG0 1483 aaKnown RBP23.38■■□□□ 1.33
COL16A1-203ENST00000373672 NEUROD2Q15784 382 aa23.38■■□□□ 1.33
COL16A1-203ENST00000373672 CHMP4BQ9H444 224 aaKnown RBP23.37■■□□□ 1.33
COL16A1-203ENST00000373672 LAS1LQ9Y4W2 734 aaKnown RBP23.37■■□□□ 1.33
COL16A1-203ENST00000373672 HAP1P54257 671 aaPredicted RBP23.36■■□□□ 1.33
COL16A1-203ENST00000373672 MS4A1P11836 297 aa23.33■■□□□ 1.33
COL16A1-203ENST00000373672 ARID4BQ4LE39 1312 aaPredicted RBP23.33■■□□□ 1.33
COL16A1-203ENST00000373672 POGKQ9P215 609 aa23.32■■□□□ 1.32
COL16A1-203ENST00000373672 SIN3AQ96ST3 1273 aa23.32■■□□□ 1.32
COL16A1-203ENST00000373672 RGS3P49796 1198 aa23.31■■□□□ 1.32
COL16A1-203ENST00000373672 DNTTIP2Q5QJE6 756 aaKnown RBP23.31■■□□□ 1.32
COL16A1-203ENST00000373672 ERICH6BQ5W0A0 696 aa23.31■■□□□ 1.32
COL16A1-203ENST00000373672 FRAT1Q92837 279 aaPredicted RBP23.31■■□□□ 1.32
COL16A1-203ENST00000373672 TNNT2P45379 298 aaPredicted RBP23.29■■□□□ 1.32
COL16A1-203ENST00000373672 NOP58Q9Y2X3 529 aaKnown RBP23.28■■□□□ 1.32
COL16A1-203ENST00000373672 CC2D1BQ5T0F9 858 aaKnown RBP23.28■■□□□ 1.32
COL16A1-203ENST00000373672 PNNQ9H307 717 aaKnown RBP23.27■■□□□ 1.32
COL16A1-203ENST00000373672 TPRNQ4KMQ1 711 aa23.27■■□□□ 1.32
COL16A1-203ENST00000373672 HSP90AB1P08238 724 aaKnown RBP23.24■■□□□ 1.31
COL16A1-203ENST00000373672 CCNB3Q8WWL7 1395 aa23.24■■□□□ 1.31
COL16A1-203ENST00000373672 TMF1P82094 1093 aa23.23■■□□□ 1.31
COL16A1-203ENST00000373672 FHAD1B1AJZ9 1412 aa23.22■■□□□ 1.31
COL16A1-203ENST00000373672 U2SURPO15042 1029 aaKnown RBP23.2■■□□□ 1.3
COL16A1-203ENST00000373672 OS9Q13438 667 aaPredicted RBP23.2■■□□□ 1.3
COL16A1-203ENST00000373672 GOLGA6L6A8MZA4 724 aa23.18■■□□□ 1.3
COL16A1-203ENST00000373672 NACADO15069 1562 aa23.18■■□□□ 1.3
COL16A1-203ENST00000373672 NAP1L5Q96NT1 182 aaPredicted RBP23.17■■□□□ 1.3
COL16A1-203ENST00000373672 TIMELESSQ9UNS1 1208 aa23.17■■□□□ 1.3
COL16A1-203ENST00000373672 KANK1Q14678 1352 aa23.15■■□□□ 1.3
COL16A1-203ENST00000373672 B4GALNT3Q6L9W6 998 aa23.14■■□□□ 1.3
COL16A1-203ENST00000373672 LMOD2Q6P5Q4 547 aa23.14■■□□□ 1.29
COL16A1-203ENST00000373672 FGD1P98174 961 aa23.14■■□□□ 1.29
COL16A1-203ENST00000373672 PLCB2Q00722 1185 aa23.14■■□□□ 1.29
COL16A1-203ENST00000373672 DCAF11Q8TEB1 546 aa23.14■■□□□ 1.29
COL16A1-203ENST00000373672 HSCBQ8IWL3 235 aa23.12■■□□□ 1.29
COL16A1-203ENST00000373672 CCER2I3L3R5 266 aa23.12■■□□□ 1.29
COL16A1-203ENST00000373672 KCNJ4P48050 445 aa23.12■■□□□ 1.29
COL16A1-203ENST00000373672 NRDCO43847 1150 aa23.07■■□□□ 1.28
COL16A1-203ENST00000373672 ERCC6Q03468 1493 aa23.06■■□□□ 1.28
COL16A1-203ENST00000373672 EIF4G1Q04637 1599 aaKnown RBP23.06■■□□□ 1.28
COL16A1-203ENST00000373672 MORC1Q86VD1 984 aa23.05■■□□□ 1.28
COL16A1-203ENST00000373672 CFAP44Q96MT7 982 aa23.05■■□□□ 1.28
COL16A1-203ENST00000373672 NPHP1O15259 732 aa23.05■■□□□ 1.28
COL16A1-203ENST00000373672 MCCP23508 829 aa23.05■■□□□ 1.28
COL16A1-203ENST00000373672 TULP1O00294 542 aaPredicted RBP23.04■■□□□ 1.28
COL16A1-203ENST00000373672 BAZ1AQ9NRL2 1556 aaPredicted RBP23.04■■□□□ 1.28
COL16A1-203ENST00000373672 TAOK2Q9UL54 1235 aa23.04■■□□□ 1.28
COL16A1-203ENST00000373672 SETD5Q9C0A6 1442 aa23.04■■□□□ 1.28
COL16A1-203ENST00000373672 NAP1L2Q9ULW6 460 aaPredicted RBP23.03■■□□□ 1.28
COL16A1-203ENST00000373672 CARMIL1Q5VZK9 1371 aa23.03■■□□□ 1.28
COL16A1-203ENST00000373672 GOLGA6L4A6NEF3 574 aa23.03■■□□□ 1.28
COL16A1-203ENST00000373672 HDGFP51858 240 aaKnown RBP23.02■■□□□ 1.28
COL16A1-203ENST00000373672 RTN4Q9NQC3 1192 aaKnown RBP23.02■■□□□ 1.28
COL16A1-203ENST00000373672 SRPK2P78362 688 aaKnown RBP23.01■■□□□ 1.27
COL16A1-203ENST00000373672 L1TD1Q5T7N2 865 aaKnown RBP23.01■■□□□ 1.27
COL16A1-203ENST00000373672 HSPA5P11021 654 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms