RNA–Protein interactions for RNA: ENST00000372771.4

RLF-201, Transcript of rearranged L-myc fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RLF, Length 6,246 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLF-201ENST00000372771 WDR43Q15061 677 aaKnown RBP eCLIP19.99■□□□□ 0.79
RLF-201ENST00000372771 WRNQ14191 1432 aaPredicted RBP eCLIP19.97■□□□□ 0.79
RLF-201ENST00000372771 HSP90AA1P07900 732 aaKnown RBP19.97■□□□□ 0.79
RLF-201ENST00000372771 EIF4G2P78344 907 aaKnown RBP eCLIP19.95■□□□□ 0.78
RLF-201ENST00000372771 KCNH8Q96L42 1107 aa19.93■□□□□ 0.78
RLF-201ENST00000372771 UPF2Q9HAU5 1272 aaKnown RBP19.91■□□□□ 0.78
RLF-201ENST00000372771 EEA1Q15075 1411 aa19.89■□□□□ 0.78
RLF-201ENST00000372771 RGL3Q3MIN7 710 aa19.89■□□□□ 0.77
RLF-201ENST00000372771 BAZ1BQ9UIG0 1483 aaKnown RBP19.89■□□□□ 0.77
RLF-201ENST00000372771 ARXQ96QS3 562 aa19.88■□□□□ 0.77
RLF-201ENST00000372771 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.86■□□□□ 0.77
RLF-201ENST00000372771 TNIKQ9UKE5 1360 aa19.86■□□□□ 0.77
RLF-201ENST00000372771 SIN3AQ96ST3 1273 aa19.85■□□□□ 0.77
RLF-201ENST00000372771 EIF5BO60841 1220 aaKnown RBP19.83■□□□□ 0.76
RLF-201ENST00000372771 CEP164Q9UPV0 1460 aa19.81■□□□□ 0.76
RLF-201ENST00000372771 KIF27Q86VH2 1401 aa19.8■□□□□ 0.76
RLF-201ENST00000372771 CECR2Q9BXF3 1484 aa19.79■□□□□ 0.76
RLF-201ENST00000372771 PLEKHG5O94827 1062 aa19.79■□□□□ 0.76
RLF-201ENST00000372771 NACADO15069 1562 aa19.79■□□□□ 0.76
RLF-201ENST00000372771 PLEKHD1A6NEE1 506 aa19.78■□□□□ 0.76
RLF-201ENST00000372771 ANP32BQ92688 251 aaKnown RBP19.77■□□□□ 0.75
RLF-201ENST00000372771 SUPT16HQ9Y5B9 1047 aaKnown RBP19.75■□□□□ 0.75
RLF-201ENST00000372771 CFDP1Q9UEE9 299 aaPredicted RBP19.74■□□□□ 0.75
RLF-201ENST00000372771 SOGA1O94964 1423 aa19.74■□□□□ 0.75
RLF-201ENST00000372771 ZBTB7CA1YPR0 619 aa19.72■□□□□ 0.75
RLF-201ENST00000372771 CARD11Q9BXL7 1154 aa19.7■□□□□ 0.74
RLF-201ENST00000372771 BAZ1AQ9NRL2 1556 aaPredicted RBP19.66■□□□□ 0.74
RLF-201ENST00000372771 PPP1R15AO75807 674 aaPredicted RBP19.64■□□□□ 0.73
RLF-201ENST00000372771 C14orf37Q86TY3 774 aa19.64■□□□□ 0.73
RLF-201ENST00000372771 ABCC8Q09428 1581 aa19.61■□□□□ 0.73
RLF-201ENST00000372771 KNSTRNQ9Y448 316 aa19.61■□□□□ 0.73
RLF-201ENST00000372771 MYH16Q9H6N6 1097 aa19.61■□□□□ 0.73
RLF-201ENST00000372771 NEUROD2Q15784 382 aa19.6■□□□□ 0.73
RLF-201ENST00000372771 PPM1GO15355 546 aaPredicted RBP19.6■□□□□ 0.73
RLF-201ENST00000372771 CCNB3Q8WWL7 1395 aa19.59■□□□□ 0.73
RLF-201ENST00000372771 EIF4G1Q04637 1599 aaKnown RBP19.58■□□□□ 0.73
RLF-201ENST00000372771 CC2D1BQ5T0F9 858 aaKnown RBP19.57■□□□□ 0.72
RLF-201ENST00000372771 A0A0G2JS52 829 aa19.57■□□□□ 0.72
RLF-201ENST00000372771 TNNT2P45379 298 aaPredicted RBP19.55■□□□□ 0.72
RLF-201ENST00000372771 CUX2O14529 1486 aa19.55■□□□□ 0.72
RLF-201ENST00000372771 CARMIL1Q5VZK9 1371 aa19.52■□□□□ 0.72
RLF-201ENST00000372771 MROH2BQ7Z745 1585 aa19.52■□□□□ 0.72
RLF-201ENST00000372771 KANK4Q5T7N3 995 aaPredicted RBP19.52■□□□□ 0.72
RLF-201ENST00000372771 LAS1LQ9Y4W2 734 aaKnown RBP19.5■□□□□ 0.71
RLF-201ENST00000372771 CFAP53Q96M91 514 aa19.5■□□□□ 0.71
RLF-201ENST00000372771 CCDC88BA6NC98 1476 aa19.5■□□□□ 0.71
RLF-201ENST00000372771 ERCC6Q03468 1493 aa19.48■□□□□ 0.71
RLF-201ENST00000372771 DDRGK1Q96HY6 314 aa19.48■□□□□ 0.71
RLF-201ENST00000372771 FOXD1Q16676 465 aa19.48■□□□□ 0.71
RLF-201ENST00000372771 ARID4BQ4LE39 1312 aaPredicted RBP19.47■□□□□ 0.71
RLF-201ENST00000372771 CDCA8Q53HL2 280 aa19.47■□□□□ 0.71
RLF-201ENST00000372771 B4GALNT3Q6L9W6 998 aa19.47■□□□□ 0.71
RLF-201ENST00000372771 DCAF11Q8TEB1 546 aa19.47■□□□□ 0.71
RLF-201ENST00000372771 FHAD1B1AJZ9 1412 aa19.46■□□□□ 0.71
RLF-201ENST00000372771 BECN1Q14457 450 aa19.45■□□□□ 0.7
RLF-201ENST00000372771 FTSJ3Q8IY81 847 aaKnown RBP19.45■□□□□ 0.7
RLF-201ENST00000372771 RGS3P49796 1198 aa19.45■□□□□ 0.7
RLF-201ENST00000372771 FRAT1Q92837 279 aaPredicted RBP19.44■□□□□ 0.7
RLF-201ENST00000372771 PPP4R2Q9NY27 417 aa19.44■□□□□ 0.7
RLF-201ENST00000372771 VPS8Q8N3P4 1428 aa19.41■□□□□ 0.7
RLF-201ENST00000372771 ANP32EQ9BTT0 268 aa19.41■□□□□ 0.7
RLF-201ENST00000372771 TPRNQ4KMQ1 711 aa19.41■□□□□ 0.7
RLF-201ENST00000372771 SETD5Q9C0A6 1442 aa19.41■□□□□ 0.7
RLF-201ENST00000372771 HSPA5P11021 654 aaKnown RBP19.4■□□□□ 0.7
RLF-201ENST00000372771 POGKQ9P215 609 aa19.39■□□□□ 0.69
RLF-201ENST00000372771 MAPK8IP3Q9UPT6 1336 aa19.38■□□□□ 0.69
RLF-201ENST00000372771 ARHGAP35Q9NRY4 1499 aa19.37■□□□□ 0.69
RLF-201ENST00000372771 NCLP19338 710 aaKnown RBP19.36■□□□□ 0.69
RLF-201ENST00000372771 U2SURPO15042 1029 aaKnown RBP19.36■□□□□ 0.69
RLF-201ENST00000372771 WIZO95785 1651 aa19.35■□□□□ 0.69
RLF-201ENST00000372771 TMF1P82094 1093 aa19.32■□□□□ 0.68
RLF-201ENST00000372771 SAFB2Q14151 953 aaKnown RBP eCLIP19.32■□□□□ 0.684e-8■■□□□ 12.9
RLF-201ENST00000372771 RAB3GAP2Q9H2M9 1393 aa19.32■□□□□ 0.68
RLF-201ENST00000372771 NUDCQ9Y266 331 aa19.3■□□□□ 0.68
RLF-201ENST00000372771 PKD2Q13563 968 aa19.3■□□□□ 0.68
RLF-201ENST00000372771 LMOD2Q6P5Q4 547 aa19.29■□□□□ 0.68
RLF-201ENST00000372771 NOP58Q9Y2X3 529 aaKnown RBP19.28■□□□□ 0.68
RLF-201ENST00000372771 TRIM44Q96DX7 344 aaPredicted RBP19.27■□□□□ 0.67
RLF-201ENST00000372771 HAP1P54257 671 aaPredicted RBP19.26■□□□□ 0.67
RLF-201ENST00000372771 SOX12O15370 315 aa19.26■□□□□ 0.67
RLF-201ENST00000372771 GOLGA6L22H0YM25 854 aa19.26■□□□□ 0.67
RLF-201ENST00000372771 MLECQ14165 292 aa19.26■□□□□ 0.67
RLF-201ENST00000372771 RTN4Q9NQC3 1192 aaKnown RBP19.25■□□□□ 0.67
RLF-201ENST00000372771 CCER2I3L3R5 266 aa19.24■□□□□ 0.67
RLF-201ENST00000372771 TDRD9Q8NDG6 1382 aaKnown RBP19.24■□□□□ 0.67
RLF-201ENST00000372771 CASC1Q6TDU7 716 aa19.24■□□□□ 0.67
RLF-201ENST00000372771 MPHOSPH9Q99550 1183 aa19.22■□□□□ 0.67
RLF-201ENST00000372771 TIMELESSQ9UNS1 1208 aa19.22■□□□□ 0.67
RLF-201ENST00000372771 SRPK2P78362 688 aaKnown RBP19.22■□□□□ 0.67
RLF-201ENST00000372771 GLIPR1L2Q4G1C9 344 aa19.21■□□□□ 0.67
RLF-201ENST00000372771 KANK1Q14678 1352 aa19.2■□□□□ 0.66
RLF-201ENST00000372771 TAOK2Q9UL54 1235 aa19.2■□□□□ 0.66
RLF-201ENST00000372771 MORC1Q86VD1 984 aa19.19■□□□□ 0.66
RLF-201ENST00000372771 STK26Q9P289 416 aa19.19■□□□□ 0.66
RLF-201ENST00000372771 GGT6Q6P531 493 aa19.18■□□□□ 0.66
RLF-201ENST00000372771 SPRYD3Q8NCJ5 442 aa19.16■□□□□ 0.66
RLF-201ENST00000372771 TOP2AP11388 1531 aaKnown RBP19.16■□□□□ 0.66
RLF-201ENST00000372771 RBM19Q9Y4C8 960 aaKnown RBP19.16■□□□□ 0.66
RLF-201ENST00000372771 SMARCA2P51531 1590 aa19.16■□□□□ 0.66
RLF-201ENST00000372771 ROCK2O75116 1388 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms