RNA–Protein interactions for RNA: ENST00000370056.8

VAV3-202, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAV3, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-202ENST00000370056 NPM1P06748 294 aaKnown RBP eCLIP29.12■■■□□ 2.25
VAV3-202ENST00000370056 CCDC136Q96JN2 1154 aa29.09■■■□□ 2.25
VAV3-202ENST00000370056 SALL2Q9Y467 1007 aaPredicted RBP29.09■■■□□ 2.25
VAV3-202ENST00000370056 CCDC88BA6NC98 1476 aa29.07■■■□□ 2.24
VAV3-202ENST00000370056 PLEKHD1A6NEE1 506 aa29.03■■■□□ 2.24
VAV3-202ENST00000370056 CCNB3Q8WWL7 1395 aa29.02■■■□□ 2.24
VAV3-202ENST00000370056 BCL11AQ9H165 835 aa29.01■■■□□ 2.23
VAV3-202ENST00000370056 SLC24A1O60721 1099 aa29■■■□□ 2.23
VAV3-202ENST00000370056 FHAD1B1AJZ9 1412 aa29■■■□□ 2.23
VAV3-202ENST00000370056 ESF1Q9H501 851 aaKnown RBP29■■■□□ 2.23
VAV3-202ENST00000370056 STAG3Q9UJ98 1225 aa28.99■■■□□ 2.23
VAV3-202ENST00000370056 WDR43Q15061 677 aaKnown RBP eCLIP28.98■■■□□ 2.23
VAV3-202ENST00000370056 VPS8Q8N3P4 1428 aa28.98■■■□□ 2.23
VAV3-202ENST00000370056 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.97■■■□□ 2.23
VAV3-202ENST00000370056 ABCC8Q09428 1581 aa28.94■■■□□ 2.22
VAV3-202ENST00000370056 CARMIL1Q5VZK9 1371 aa28.94■■■□□ 2.22
VAV3-202ENST00000370056 CFDP1Q9UEE9 299 aaPredicted RBP28.93■■■□□ 2.22
VAV3-202ENST00000370056 SIN3AQ96ST3 1273 aa28.91■■■□□ 2.22
VAV3-202ENST00000370056 CUX2O14529 1486 aa28.91■■■□□ 2.22
VAV3-202ENST00000370056 IRX6P78412 446 aaPredicted RBP28.91■■■□□ 2.22
VAV3-202ENST00000370056 UPF2Q9HAU5 1272 aaKnown RBP28.88■■■□□ 2.21
VAV3-202ENST00000370056 TIMELESSQ9UNS1 1208 aa28.83■■■□□ 2.21
VAV3-202ENST00000370056 TOP2AP11388 1531 aaKnown RBP28.8■■■□□ 2.2
VAV3-202ENST00000370056 SMARCA2P51531 1590 aa28.8■■■□□ 2.2
VAV3-202ENST00000370056 KCNH8Q96L42 1107 aa28.78■■■□□ 2.2
VAV3-202ENST00000370056 WIZO95785 1651 aa28.75■■■□□ 2.19
VAV3-202ENST00000370056 RGL3Q3MIN7 710 aa28.74■■■□□ 2.19
VAV3-202ENST00000370056 CARD11Q9BXL7 1154 aa28.71■■■□□ 2.19
VAV3-202ENST00000370056 SETD5Q9C0A6 1442 aa28.7■■■□□ 2.18
VAV3-202ENST00000370056 KANK4Q5T7N3 995 aaPredicted RBP28.7■■■□□ 2.18
VAV3-202ENST00000370056 HSP90AA1P07900 732 aaKnown RBP28.68■■■□□ 2.18
VAV3-202ENST00000370056 SUPT16HQ9Y5B9 1047 aaKnown RBP28.66■■■□□ 2.18
VAV3-202ENST00000370056 CDCA8Q53HL2 280 aa28.65■■■□□ 2.18
VAV3-202ENST00000370056 ARHGAP35Q9NRY4 1499 aa28.62■■■□□ 2.17
VAV3-202ENST00000370056 NBR1Q14596 966 aa28.59■■■□□ 2.17
VAV3-202ENST00000370056 KNSTRNQ9Y448 316 aa28.57■■■□□ 2.16
VAV3-202ENST00000370056 EIF4G1Q04637 1599 aaKnown RBP28.56■■■□□ 2.16
VAV3-202ENST00000370056 CCER2I3L3R5 266 aa28.53■■■□□ 2.16
VAV3-202ENST00000370056 ANP32BQ92688 251 aaKnown RBP28.52■■■□□ 2.16
VAV3-202ENST00000370056 ERCC6Q03468 1493 aa28.5■■■□□ 2.15
VAV3-202ENST00000370056 RAB3GAP2Q9H2M9 1393 aa28.49■■■□□ 2.15
VAV3-202ENST00000370056 PPP4R2Q9NY27 417 aa28.49■■■□□ 2.15
VAV3-202ENST00000370056 FMN1Q68DA7 1419 aa28.47■■■□□ 2.15
VAV3-202ENST00000370056 CFAP53Q96M91 514 aa28.44■■■□□ 2.14
VAV3-202ENST00000370056 PLPPR3Q6T4P5 718 aa28.44■■■□□ 2.14
VAV3-202ENST00000370056 SENP3-EIF4A1A0A087X0R7 540 aa28.43■■■□□ 2.14
VAV3-202ENST00000370056 DDRGK1Q96HY6 314 aa28.41■■■□□ 2.14
VAV3-202ENST00000370056 SMARCA4P51532 1647 aa28.4■■■□□ 2.14
VAV3-202ENST00000370056 RAPGEF2Q9Y4G8 1499 aa28.4■■■□□ 2.14
VAV3-202ENST00000370056 ATAD2BQ9ULI0 1458 aa28.38■■■□□ 2.13
VAV3-202ENST00000370056 HSPA5P11021 654 aaKnown RBP28.37■■■□□ 2.13
VAV3-202ENST00000370056 MYH16Q9H6N6 1097 aa28.37■■■□□ 2.13
VAV3-202ENST00000370056 PDS5BQ9NTI5 1447 aa28.37■■■□□ 2.13
VAV3-202ENST00000370056 DCAF11Q8TEB1 546 aa28.36■■■□□ 2.13
VAV3-202ENST00000370056 PPP1R15AO75807 674 aaPredicted RBP28.36■■■□□ 2.13
VAV3-202ENST00000370056 TDRD9Q8NDG6 1382 aaKnown RBP28.34■■■□□ 2.13
VAV3-202ENST00000370056 CADPSQ9ULU8 1353 aa28.33■■■□□ 2.13
VAV3-202ENST00000370056 ANP32EQ9BTT0 268 aa28.32■■■□□ 2.12
VAV3-202ENST00000370056 BECN1Q14457 450 aa28.29■■■□□ 2.12
VAV3-202ENST00000370056 TMF1P82094 1093 aa28.28■■■□□ 2.12
VAV3-202ENST00000370056 RUSC2Q8N2Y8 1516 aa28.27■■■□□ 2.12
VAV3-202ENST00000370056 SENP3Q9H4L4 574 aaPredicted RBP28.27■■■□□ 2.12
VAV3-202ENST00000370056 PKD2Q13563 968 aa28.26■■■□□ 2.11
VAV3-202ENST00000370056 MPHOSPH9Q99550 1183 aa28.25■■■□□ 2.11
VAV3-202ENST00000370056 CC2D1BQ5T0F9 858 aaKnown RBP28.25■■■□□ 2.11
VAV3-202ENST00000370056 CARMIL2Q6F5E8 1435 aa28.23■■■□□ 2.11
VAV3-202ENST00000370056 EIF5BO60841 1220 aaKnown RBP28.22■■■□□ 2.11
VAV3-202ENST00000370056 FHOD3Q2V2M9 1422 aa28.21■■■□□ 2.11
VAV3-202ENST00000370056 FOXD1Q16676 465 aa28.2■■■□□ 2.11
VAV3-202ENST00000370056 B4GALNT3Q6L9W6 998 aa28.19■■■□□ 2.1
VAV3-202ENST00000370056 NUDCQ9Y266 331 aa28.17■■■□□ 2.1
VAV3-202ENST00000370056 NEUROD2Q15784 382 aa28.17■■■□□ 2.1
VAV3-202ENST00000370056 KANK1Q14678 1352 aa28.16■■■□□ 2.1
VAV3-202ENST00000370056 DHX57Q6P158 1386 aaKnown RBP28.15■■■□□ 2.1
VAV3-202ENST00000370056 FTSJ3Q8IY81 847 aaKnown RBP28.14■■■□□ 2.1
VAV3-202ENST00000370056 MAPK8IP3Q9UPT6 1336 aa28.14■■■□□ 2.1
VAV3-202ENST00000370056 ANKRD30AQ9BXX3 1397 aa28.12■■■□□ 2.09
VAV3-202ENST00000370056 ARXQ96QS3 562 aa28.11■■■□□ 2.09
VAV3-202ENST00000370056 PPM1GO15355 546 aaPredicted RBP28.11■■■□□ 2.09
VAV3-202ENST00000370056 ERICH6BQ5W0A0 696 aa28.1■■■□□ 2.09
VAV3-202ENST00000370056 POGKQ9P215 609 aa28.09■■■□□ 2.09
VAV3-202ENST00000370056 NUP155O75694 1391 aa28.08■■■□□ 2.09
VAV3-202ENST00000370056 KTN1Q86UP2 1357 aaKnown RBP28.05■■■□□ 2.08
VAV3-202ENST00000370056 TNNT2P45379 298 aaPredicted RBP28.04■■■□□ 2.08
VAV3-202ENST00000370056 L3MBTL2Q969R5 705 aa28.04■■■□□ 2.08
VAV3-202ENST00000370056 NOP58Q9Y2X3 529 aaKnown RBP28.04■■■□□ 2.08
VAV3-202ENST00000370056 RGS3P49796 1198 aa28.03■■■□□ 2.08
VAV3-202ENST00000370056 FRAT1Q92837 279 aaPredicted RBP28.03■■■□□ 2.08
VAV3-202ENST00000370056 C14orf37Q86TY3 774 aa28.01■■■□□ 2.07
VAV3-202ENST00000370056 CCDC18Q5T9S5 1454 aa28.01■■■□□ 2.07
VAV3-202ENST00000370056 MS4A1P11836 297 aa28■■■□□ 2.07
VAV3-202ENST00000370056 RALBP1Q15311 655 aa28■■■□□ 2.07
VAV3-202ENST00000370056 ROCK2O75116 1388 aaKnown RBP27.98■■■□□ 2.07
VAV3-202ENST00000370056 RBM19Q9Y4C8 960 aaKnown RBP27.97■■■□□ 2.07
VAV3-202ENST00000370056 GOLGA6L22H0YM25 854 aa27.96■■■□□ 2.07
VAV3-202ENST00000370056 ARID4BQ4LE39 1312 aaPredicted RBP27.95■■■□□ 2.07
VAV3-202ENST00000370056 U2SURPO15042 1029 aaKnown RBP27.94■■■□□ 2.06
VAV3-202ENST00000370056 EFCAB2Q5VUJ9 269 aa27.94■■■□□ 2.06
VAV3-202ENST00000370056 CHMP4BQ9H444 224 aaKnown RBP27.94■■■□□ 2.06
VAV3-202ENST00000370056 PNNQ9H307 717 aaKnown RBP27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms