RNA–Protein interactions for RNA: ENST00000369239.9

PNISR-201, Transcript of PNN interacting serine and arginine rich protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNISR, Length 5,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNISR-201ENST00000369239 RSPH6AQ9H0K4 717 aa6.22□□□□□ -1.41
PNISR-201ENST00000369239 RAD21O60216 631 aa6.22□□□□□ -1.41
PNISR-201ENST00000369239 PLEKHG5O94827 1062 aa6.21□□□□□ -1.41
PNISR-201ENST00000369239 APLP2Q06481 763 aa6.21□□□□□ -1.41
PNISR-201ENST00000369239 IL27Q8NEV9 243 aa6.21□□□□□ -1.41
PNISR-201ENST00000369239 HRCP23327 699 aa6.21□□□□□ -1.42
PNISR-201ENST00000369239 KCTD17Q8N5Z5 321 aa6.19□□□□□ -1.42
PNISR-201ENST00000369239 KRI1Q8N9T8 703 aaKnown RBP6.19□□□□□ -1.42
PNISR-201ENST00000369239 BRPF1P55201 1214 aaPredicted RBP6.18□□□□□ -1.42
PNISR-201ENST00000369239 SLC24A3Q9HC58 644 aa6.17□□□□□ -1.42
PNISR-201ENST00000369239 STK25O00506 426 aa6.16□□□□□ -1.42
PNISR-201ENST00000369239 FAM9AQ8IZU1 332 aaPredicted RBP6.16□□□□□ -1.42
PNISR-201ENST00000369239 TRHP20396 242 aaPredicted RBP6.15□□□□□ -1.42
PNISR-201ENST00000369239 SAMD1Q6SPF0 538 aaPredicted RBP6.15□□□□□ -1.42
PNISR-201ENST00000369239 HMGB1P09429 215 aaKnown RBP6.15□□□□□ -1.43
PNISR-201ENST00000369239 ZMYND15Q9H091 742 aa6.15□□□□□ -1.43
PNISR-201ENST00000369239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.14□□□□□ -1.43
PNISR-201ENST00000369239 HNRNPUL2Q1KMD3 747 aaKnown RBP6.14□□□□□ -1.43
PNISR-201ENST00000369239 P3H3Q8IVL6 736 aa6.11□□□□□ -1.43
PNISR-201ENST00000369239 ZNF219Q9P2Y4 722 aaPredicted RBP6.11□□□□□ -1.43
PNISR-201ENST00000369239 FOXD4L5Q5VV16 416 aaPredicted RBP6.11□□□□□ -1.43
PNISR-201ENST00000369239 FOXD4L4Q8WXT5 416 aaPredicted RBP6.11□□□□□ -1.43
PNISR-201ENST00000369239 SHROOM4Q9ULL8 1493 aa6.09□□□□□ -1.43
PNISR-201ENST00000369239 FBXW7Q969H0 707 aa6.09□□□□□ -1.44
PNISR-201ENST00000369239 STK24Q9Y6E0 443 aa6.08□□□□□ -1.44
PNISR-201ENST00000369239 GPBP1L1Q9HC44 474 aaPredicted RBP6.08□□□□□ -1.44
PNISR-201ENST00000369239 LOC105371045A0A1W2PR82 267 aa6.07□□□□□ -1.44
PNISR-201ENST00000369239 TMCO4Q5TGY1 634 aa6.07□□□□□ -1.44
PNISR-201ENST00000369239 DCAF8Q5TAQ9 597 aa6.07□□□□□ -1.44
PNISR-201ENST00000369239 HSP90B1P14625 803 aaKnown RBP6.04□□□□□ -1.44
PNISR-201ENST00000369239 PPM1GO15355 546 aaPredicted RBP6.04□□□□□ -1.44
PNISR-201ENST00000369239 GZF1Q9H116 711 aaPredicted RBP6.04□□□□□ -1.44
PNISR-201ENST00000369239 PPP1R1BQ9UD71 204 aaPredicted RBP6.04□□□□□ -1.44
PNISR-201ENST00000369239 ZNF428Q96B54 188 aa6.03□□□□□ -1.44
PNISR-201ENST00000369239 CCDC97Q96F63 343 aaPredicted RBP6.03□□□□□ -1.44
PNISR-201ENST00000369239 MTMR7Q9Y216 660 aa6.02□□□□□ -1.45
PNISR-201ENST00000369239 CCDC82Q8N4S0 544 aa6.01□□□□□ -1.45
PNISR-201ENST00000369239 ARID4BQ4LE39 1312 aaPredicted RBP6.01□□□□□ -1.45
PNISR-201ENST00000369239 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.01□□□□□ -1.45
PNISR-201ENST00000369239 IGSF3O75054 1194 aa6□□□□□ -1.45
PNISR-201ENST00000369239 ZNF777Q9ULD5 760 aaPredicted RBP6□□□□□ -1.45
PNISR-201ENST00000369239 ZC3H15Q8WU90 426 aaKnown RBP5.99□□□□□ -1.45
PNISR-201ENST00000369239 KCNV2Q8TDN2 545 aa5.97□□□□□ -1.45
PNISR-201ENST00000369239 CHMP4AQ9BY43 222 aa5.97□□□□□ -1.45
PNISR-201ENST00000369239 E9PSI1 815 aa5.97□□□□□ -1.45
PNISR-201ENST00000369239 MSH5O43196 834 aa5.97□□□□□ -1.45
PNISR-201ENST00000369239 NECTIN2Q92692 538 aa5.97□□□□□ -1.45
PNISR-201ENST00000369239 BCL11BQ9C0K0 894 aaPredicted RBP5.96□□□□□ -1.46
PNISR-201ENST00000369239 HS6ST3Q8IZP7 471 aa5.96□□□□□ -1.46
PNISR-201ENST00000369239 ZNF526Q8TF50 670 aaPredicted RBP5.96□□□□□ -1.46
PNISR-201ENST00000369239 ZNF316A6NFI3 1004 aaPredicted RBP5.95□□□□□ -1.46
PNISR-201ENST00000369239 ZNF692Q9BU19 519 aaPredicted RBP5.95□□□□□ -1.46
PNISR-201ENST00000369239 POLA2Q14181 598 aa5.95□□□□□ -1.46
PNISR-201ENST00000369239 SEMA3EO15041 775 aa5.95□□□□□ -1.46
PNISR-201ENST00000369239 CAPN15O75808 1086 aa5.94□□□□□ -1.46
PNISR-201ENST00000369239 ZBTB47Q9UFB7 747 aaPredicted RBP5.94□□□□□ -1.46
PNISR-201ENST00000369239 CLUAP1Q96AJ1 413 aa5.94□□□□□ -1.46
PNISR-201ENST00000369239 MFAP1P55081 439 aaKnown RBP5.93□□□□□ -1.46
PNISR-201ENST00000369239 C1orf115Q9H7X2 142 aa5.93□□□□□ -1.46
PNISR-201ENST00000369239 MKRN3Q13064 507 aaKnown RBP5.92□□□□□ -1.46
PNISR-201ENST00000369239 HOXD11P31277 338 aaPredicted RBP5.92□□□□□ -1.46
PNISR-201ENST00000369239 GTPBP6O43824 516 aaPredicted RBP5.91□□□□□ -1.46
PNISR-201ENST00000369239 DHX37Q8IY37 1157 aaKnown RBP5.91□□□□□ -1.46
PNISR-201ENST00000369239 ABCB7O75027 752 aa5.91□□□□□ -1.46
PNISR-201ENST00000369239 SMYD5Q6GMV2 418 aa5.91□□□□□ -1.46
PNISR-201ENST00000369239 RYDENQ9NUL5 291 aaKnown RBP5.91□□□□□ -1.46
PNISR-201ENST00000369239 MKRN4PQ13434 485 aaPredicted RBP5.9□□□□□ -1.46
PNISR-201ENST00000369239 NKX1-1Q15270 411 aaPredicted RBP5.9□□□□□ -1.46
PNISR-201ENST00000369239 RIOK3O14730 519 aaKnown RBP5.89□□□□□ -1.47
PNISR-201ENST00000369239 KDM4CQ9H3R0 1056 aa5.89□□□□□ -1.47
PNISR-201ENST00000369239 TTLL12Q14166 644 aaPredicted RBP5.88□□□□□ -1.47
PNISR-201ENST00000369239 STAG3Q9UJ98 1225 aa5.88□□□□□ -1.47
PNISR-201ENST00000369239 U3KPZ7 1027 aaPredicted RBP5.88□□□□□ -1.47
PNISR-201ENST00000369239 DMRT2Q9Y5R5 561 aa5.88□□□□□ -1.47
PNISR-201ENST00000369239 PABPN1Q86U42 306 aaKnown RBP eCLIP5.87□□□□□ -1.47
PNISR-201ENST00000369239 RFX1P22670 979 aa5.87□□□□□ -1.47
PNISR-201ENST00000369239 GPIHBP1Q8IV16 184 aa5.85□□□□□ -1.47
PNISR-201ENST00000369239 ACIN1Q9UKV3 1341 aaKnown RBP5.85□□□□□ -1.47
PNISR-201ENST00000369239 AK7Q96M32 723 aa5.84□□□□□ -1.47
PNISR-201ENST00000369239 GSE1Q14687 1217 aa5.84□□□□□ -1.47
PNISR-201ENST00000369239 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.83□□□□□ -1.48
PNISR-201ENST00000369239 ZFP91Q96JP5 570 aaPredicted RBP5.83□□□□□ -1.48
PNISR-201ENST00000369239 DNAJC5BQ9UF47 199 aa5.82□□□□□ -1.48
PNISR-201ENST00000369239 VGFO15240 615 aaPredicted RBP5.82□□□□□ -1.48
PNISR-201ENST00000369239 FLIIQ13045 1269 aa5.82□□□□□ -1.48
PNISR-201ENST00000369239 RETREG2Q8NC44 543 aa5.81□□□□□ -1.48
PNISR-201ENST00000369239 RNF25Q96BH1 459 aaPredicted RBP5.81□□□□□ -1.48
PNISR-201ENST00000369239 PYGBP11216 843 aa5.81□□□□□ -1.48
PNISR-201ENST00000369239 RBM26Q5T8P6 1007 aaKnown RBP5.81□□□□□ -1.48
PNISR-201ENST00000369239 FAM117AQ9C073 453 aa5.81□□□□□ -1.48
PNISR-201ENST00000369239 E2F4Q16254 413 aa5.81□□□□□ -1.48
PNISR-201ENST00000369239 NUTM2FA1L443 756 aa5.8□□□□□ -1.48
PNISR-201ENST00000369239 CCER1Q8TC90 406 aaPredicted RBP5.8□□□□□ -1.48
PNISR-201ENST00000369239 FAM212AQ96EL1 285 aa5.8□□□□□ -1.48
PNISR-201ENST00000369239 A0A0U1RQG5 324 aaPredicted RBP5.8□□□□□ -1.48
PNISR-201ENST00000369239 DNAJC5Q9H3Z4 198 aa5.8□□□□□ -1.48
PNISR-201ENST00000369239 PCMTD1Q96MG8 357 aaPredicted RBP5.78□□□□□ -1.48
PNISR-201ENST00000369239 PDE4DQ08499 809 aa5.78□□□□□ -1.48
PNISR-201ENST00000369239 CADPS2Q86UW7 1296 aa5.78□□□□□ -1.48
PNISR-201ENST00000369239 BRD2P25440 801 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms