RNA–Protein interactions for RNA: ENST00000367425.8

CFHR3-201, Transcript of complement factor H related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFHR3, Length 1,645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-201ENST00000367425 ZNF692Q9BU19 519 aaPredicted RBP12.42□□□□□ -0.42
CFHR3-201ENST00000367425 PELP1Q8IZL8 1130 aaKnown RBP12.4□□□□□ -0.42
CFHR3-201ENST00000367425 MKRN4PQ13434 485 aaPredicted RBP12.39□□□□□ -0.43
CFHR3-201ENST00000367425 PAK3O75914 559 aaPredicted RBP12.37□□□□□ -0.43
CFHR3-201ENST00000367425 SPDYE4A6NLX3 237 aa12.33□□□□□ -0.44
CFHR3-201ENST00000367425 ASTLQ6HA08 431 aaPredicted RBP12.33□□□□□ -0.44
CFHR3-201ENST00000367425 ATMINO43313 823 aaPredicted RBP12.22□□□□□ -0.45
CFHR3-201ENST00000367425 AMER1Q5JTC6 1135 aaPredicted RBP12.2□□□□□ -0.46
CFHR3-201ENST00000367425 ST18O60284 1047 aa12.19□□□□□ -0.46
CFHR3-201ENST00000367425 TMEM121BQ9BXQ6 578 aaPredicted RBP12.19□□□□□ -0.46
CFHR3-201ENST00000367425 FBXO3Q9UK99 471 aa12.17□□□□□ -0.46
CFHR3-201ENST00000367425 PROM2Q8N271 834 aa12.14□□□□□ -0.47
CFHR3-201ENST00000367425 RTN4Q9NQC3 1192 aaKnown RBP12.12□□□□□ -0.47
CFHR3-201ENST00000367425 PABPN1Q86U42 306 aaKnown RBP eCLIP12.11□□□□□ -0.47
CFHR3-201ENST00000367425 PHF12Q96QT6 1004 aa12.1□□□□□ -0.47
CFHR3-201ENST00000367425 SNPHO15079 494 aa11.98□□□□□ -0.49
CFHR3-201ENST00000367425 VASPP50552 380 aaPredicted RBP11.96□□□□□ -0.5
CFHR3-201ENST00000367425 SLAIN1Q8ND83 568 aa11.95□□□□□ -0.5
CFHR3-201ENST00000367425 MS4A3Q96HJ5 214 aa11.93□□□□□ -0.5
CFHR3-201ENST00000367425 SEC24BO95487 1268 aa11.89□□□□□ -0.51
CFHR3-201ENST00000367425 ATN1P54259 1190 aaPredicted RBP11.89□□□□□ -0.51
CFHR3-201ENST00000367425 NPM1P06748 294 aaKnown RBP eCLIP11.87□□□□□ -0.51
CFHR3-201ENST00000367425 POTEFA5A3E0 1075 aa11.85□□□□□ -0.51
CFHR3-201ENST00000367425 STAG3Q9UJ98 1225 aa11.82□□□□□ -0.52
CFHR3-201ENST00000367425 CREBZFQ9NS37 354 aa11.8□□□□□ -0.52
CFHR3-201ENST00000367425 IFNLR1Q8IU57 520 aaPredicted RBP11.78□□□□□ -0.52
CFHR3-201ENST00000367425 RNF166Q96A37 237 aaPredicted RBP11.75□□□□□ -0.53
CFHR3-201ENST00000367425 MARVELD3Q96A59 401 aa11.72□□□□□ -0.53
CFHR3-201ENST00000367425 KRTAP3-3Q9BYR6 98 aa11.71□□□□□ -0.53
CFHR3-201ENST00000367425 KRTAP3-2Q9BYR7 98 aa11.71□□□□□ -0.53
CFHR3-201ENST00000367425 KLHL34Q8N239 644 aa11.71□□□□□ -0.54
CFHR3-201ENST00000367425 PLCD3Q8N3E9 789 aa11.71□□□□□ -0.54
CFHR3-201ENST00000367425 EMP3P54852 163 aa11.68□□□□□ -0.54
CFHR3-201ENST00000367425 IER5LQ5T953 404 aa11.68□□□□□ -0.54
CFHR3-201ENST00000367425 TIE1P35590 1138 aa11.67□□□□□ -0.54
CFHR3-201ENST00000367425 MIER1Q8N108 512 aa11.66□□□□□ -0.54
CFHR3-201ENST00000367425 SPOCK2Q92563 424 aa11.64□□□□□ -0.55
CFHR3-201ENST00000367425 BMP2KQ9NSY1 1161 aaPredicted RBP11.64□□□□□ -0.55
CFHR3-201ENST00000367425 PLEKHG5O94827 1062 aa11.64□□□□□ -0.55
CFHR3-201ENST00000367425 COLQQ9Y215 455 aaPredicted RBP11.64□□□□□ -0.55
CFHR3-201ENST00000367425 HS3ST6Q96QI5 342 aa11.59□□□□□ -0.55
CFHR3-201ENST00000367425 ZBTB47Q9UFB7 747 aaPredicted RBP11.57□□□□□ -0.56
CFHR3-201ENST00000367425 SLC24A1O60721 1099 aa11.57□□□□□ -0.56
CFHR3-201ENST00000367425 PKD2Q13563 968 aa11.53□□□□□ -0.56
CFHR3-201ENST00000367425 MYT1LQ9UL68 1186 aa11.53□□□□□ -0.56
CFHR3-201ENST00000367425 FAM205CA6NFA0 338 aa11.49□□□□□ -0.57
CFHR3-201ENST00000367425 DCAF8L2P0C7V8 631 aa11.48□□□□□ -0.57
CFHR3-201ENST00000367425 PTGER2P43116 358 aa11.47□□□□□ -0.57
CFHR3-201ENST00000367425 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.46□□□□□ -0.57
CFHR3-201ENST00000367425 ECM2O94769 699 aaPredicted RBP11.44□□□□□ -0.58
CFHR3-201ENST00000367425 PLCG2P16885 1265 aa11.44□□□□□ -0.58
CFHR3-201ENST00000367425 KIF12Q96FN5 646 aa11.41□□□□□ -0.58
CFHR3-201ENST00000367425 CIZ1Q9ULV3 898 aaPredicted RBP11.41□□□□□ -0.58
CFHR3-201ENST00000367425 TTLL13PA6NNM8 815 aa11.4□□□□□ -0.58
CFHR3-201ENST00000367425 POTEB3A0JP26 581 aa11.36□□□□□ -0.59
CFHR3-201ENST00000367425 POTEBQ6S5H4 581 aa11.36□□□□□ -0.59
CFHR3-201ENST00000367425 TRIM35Q9UPQ4 493 aa11.35□□□□□ -0.59
CFHR3-201ENST00000367425 TRIM41Q8WV44 630 aa11.33□□□□□ -0.6
CFHR3-201ENST00000367425 CCDC61Q9Y6R9 512 aa11.32□□□□□ -0.6
CFHR3-201ENST00000367425 GSE1Q14687 1217 aa11.31□□□□□ -0.6
CFHR3-201ENST00000367425 TSPYL2Q9H2G4 693 aaPredicted RBP11.3□□□□□ -0.6
CFHR3-201ENST00000367425 NUBP1P53384 320 aa11.29□□□□□ -0.6
CFHR3-201ENST00000367425 RGL2O15211 777 aa11.28□□□□□ -0.6
CFHR3-201ENST00000367425 MNX1P50219 401 aaPredicted RBP11.28□□□□□ -0.6
CFHR3-201ENST00000367425 PLA2G2EQ9NZK7 142 aa11.28□□□□□ -0.6
CFHR3-201ENST00000367425 TRPC6Q9Y210 931 aa11.27□□□□□ -0.6
CFHR3-201ENST00000367425 PLCB2Q00722 1185 aa11.26□□□□□ -0.61
CFHR3-201ENST00000367425 DCAF8Q5TAQ9 597 aa11.26□□□□□ -0.61
CFHR3-201ENST00000367425 FAM212AQ96EL1 285 aa11.24□□□□□ -0.61
CFHR3-201ENST00000367425 MAP3K13O43283 966 aa11.19□□□□□ -0.62
CFHR3-201ENST00000367425 BBXQ8WY36 941 aaPredicted RBP11.19□□□□□ -0.62
CFHR3-201ENST00000367425 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.19□□□□□ -0.62
CFHR3-201ENST00000367425 RASEFQ8IZ41 740 aa11.17□□□□□ -0.62
CFHR3-201ENST00000367425 SGIP1Q9BQI5 828 aa11.17□□□□□ -0.62
CFHR3-201ENST00000367425 IRX2Q9BZI1 471 aaPredicted RBP11.17□□□□□ -0.62
CFHR3-201ENST00000367425 RGS20O76081 388 aa11.16□□□□□ -0.62
CFHR3-201ENST00000367425 OCEL1Q9H607 264 aa11.14□□□□□ -0.63
CFHR3-201ENST00000367425 CHGAP10645 457 aaKnown RBP11.13□□□□□ -0.63
CFHR3-201ENST00000367425 TAOK2Q9UL54 1235 aa11.13□□□□□ -0.63
CFHR3-201ENST00000367425 HAP1P54257 671 aaPredicted RBP11.13□□□□□ -0.63
CFHR3-201ENST00000367425 IRX5P78411 483 aaPredicted RBP11.13□□□□□ -0.63
CFHR3-201ENST00000367425 C3orf67Q6ZVT6 689 aa11.11□□□□□ -0.63
CFHR3-201ENST00000367425 ERBB3P21860 1342 aa11.11□□□□□ -0.63
CFHR3-201ENST00000367425 RIOK3O14730 519 aaKnown RBP11.09□□□□□ -0.63
CFHR3-201ENST00000367425 CHRM1P11229 460 aaPredicted RBP11.09□□□□□ -0.63
CFHR3-201ENST00000367425 RNF25Q96BH1 459 aaPredicted RBP11.09□□□□□ -0.63
CFHR3-201ENST00000367425 PAXIP1Q6ZW49 1069 aaPredicted RBP11.06□□□□□ -0.64
CFHR3-201ENST00000367425 HS6ST3Q8IZP7 471 aa11.06□□□□□ -0.64
CFHR3-201ENST00000367425 CFAP44Q96MT7 982 aa11.06□□□□□ -0.64
CFHR3-201ENST00000367425 PYGBP11216 843 aa11.04□□□□□ -0.64
CFHR3-201ENST00000367425 VGFO15240 615 aaPredicted RBP11.03□□□□□ -0.64
CFHR3-201ENST00000367425 SPRYD3Q8NCJ5 442 aa11.02□□□□□ -0.64
CFHR3-201ENST00000367425 HCSTQ9UBK5 93 aa11.02□□□□□ -0.65
CFHR3-201ENST00000367425 HOXB1P14653 301 aaPredicted RBP10.99□□□□□ -0.65
CFHR3-201ENST00000367425 L3MBTL3Q96JM7 780 aaPredicted RBP10.98□□□□□ -0.65
CFHR3-201ENST00000367425 STK25O00506 426 aa10.97□□□□□ -0.65
CFHR3-201ENST00000367425 TMEM106CQ9BVX2 250 aa10.97□□□□□ -0.65
CFHR3-201ENST00000367425 DNAJC5Q9H3Z4 198 aa10.96□□□□□ -0.65
CFHR3-201ENST00000367425 VSIG10Q8N0Z9 540 aa10.95□□□□□ -0.66
CFHR3-201ENST00000367425 ZNF710Q8N1W2 664 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms