RNA–Protein interactions for RNA: ENST00000366856.3

CNIH4-201, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNIH4, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-201ENST00000366856 CD44P16070 742 aaKnown RBP11.65□□□□□ -0.54
CNIH4-201ENST00000366856 PYGBP11216 843 aa11.62□□□□□ -0.55
CNIH4-201ENST00000366856 ZRANB1Q9UGI0 708 aa11.61□□□□□ -0.55
CNIH4-201ENST00000366856 HAX1O00165 279 aa11.6□□□□□ -0.55
CNIH4-201ENST00000366856 POTEHQ6S545 545 aa11.58□□□□□ -0.56
CNIH4-201ENST00000366856 TRIM41Q8WV44 630 aa11.57□□□□□ -0.56
CNIH4-201ENST00000366856 RGL2O15211 777 aa11.56□□□□□ -0.56
CNIH4-201ENST00000366856 CCDC61Q9Y6R9 512 aa11.53□□□□□ -0.56
CNIH4-201ENST00000366856 C19orf67A6NJJ6 358 aa11.52□□□□□ -0.57
CNIH4-201ENST00000366856 PHF12Q96QT6 1004 aa11.51□□□□□ -0.57
CNIH4-201ENST00000366856 RNF25Q96BH1 459 aaPredicted RBP11.46□□□□□ -0.57
CNIH4-201ENST00000366856 RIOK3O14730 519 aaKnown RBP11.45□□□□□ -0.58
CNIH4-201ENST00000366856 PCDHB13Q9Y5F0 798 aa11.45□□□□□ -0.58
CNIH4-201ENST00000366856 MAP3K13O43283 966 aa11.44□□□□□ -0.58
CNIH4-201ENST00000366856 CHRM1P11229 460 aaPredicted RBP11.44□□□□□ -0.58
CNIH4-201ENST00000366856 EVX2Q03828 476 aa11.43□□□□□ -0.58
CNIH4-201ENST00000366856 PCDHB8Q9UN66 801 aa11.43□□□□□ -0.58
CNIH4-201ENST00000366856 ZNF579Q8NAF0 562 aaKnown RBP11.42□□□□□ -0.58
CNIH4-201ENST00000366856 KIF12Q96FN5 646 aa11.42□□□□□ -0.58
CNIH4-201ENST00000366856 CHGAP10645 457 aaKnown RBP11.4□□□□□ -0.58
CNIH4-201ENST00000366856 ZNF467Q7Z7K2 595 aaPredicted RBP11.4□□□□□ -0.58
CNIH4-201ENST00000366856 TAOK2Q9UL54 1235 aa11.38□□□□□ -0.59
CNIH4-201ENST00000366856 IFNL1Q8IU54 200 aa11.37□□□□□ -0.59
CNIH4-201ENST00000366856 VGFO15240 615 aaPredicted RBP11.36□□□□□ -0.59
CNIH4-201ENST00000366856 MS4A3Q96HJ5 214 aa11.35□□□□□ -0.59
CNIH4-201ENST00000366856 STK25O00506 426 aa11.34□□□□□ -0.59
CNIH4-201ENST00000366856 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.33□□□□□ -0.6
CNIH4-201ENST00000366856 ZFP91Q96JP5 570 aaPredicted RBP11.33□□□□□ -0.6
CNIH4-201ENST00000366856 PDAP1Q13442 181 aaKnown RBP11.31□□□□□ -0.6
CNIH4-201ENST00000366856 STK24Q9Y6E0 443 aa11.31□□□□□ -0.6
CNIH4-201ENST00000366856 PSEN1P49768 467 aa11.3□□□□□ -0.6
CNIH4-201ENST00000366856 SGIP1Q9BQI5 828 aa11.3□□□□□ -0.6
CNIH4-201ENST00000366856 GALR2O43603 387 aaPredicted RBP11.29□□□□□ -0.6
CNIH4-201ENST00000366856 BCL11BQ9C0K0 894 aaPredicted RBP11.29□□□□□ -0.6
CNIH4-201ENST00000366856 HS6ST3Q8IZP7 471 aa11.26□□□□□ -0.61
CNIH4-201ENST00000366856 TRPC6Q9Y210 931 aa11.26□□□□□ -0.61
CNIH4-201ENST00000366856 TMEM106CQ9BVX2 250 aa11.23□□□□□ -0.61
CNIH4-201ENST00000366856 GABBR2O75899 941 aa11.22□□□□□ -0.61
CNIH4-201ENST00000366856 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.22□□□□□ -0.61
CNIH4-201ENST00000366856 GOLGA2Q08379 1002 aa11.2□□□□□ -0.62
CNIH4-201ENST00000366856 BBXQ8WY36 941 aaPredicted RBP11.2□□□□□ -0.62
CNIH4-201ENST00000366856 CABP2Q9NPB3 220 aa11.2□□□□□ -0.62
CNIH4-201ENST00000366856 SP7Q8TDD2 431 aaPredicted RBP11.19□□□□□ -0.62
CNIH4-201ENST00000366856 CLCN6P51797 869 aa11.18□□□□□ -0.62
CNIH4-201ENST00000366856 CFAP44Q96MT7 982 aa11.17□□□□□ -0.62
CNIH4-201ENST00000366856 PAXIP1Q6ZW49 1069 aaPredicted RBP11.15□□□□□ -0.62
CNIH4-201ENST00000366856 DCBLD2Q96PD2 775 aa11.15□□□□□ -0.62
CNIH4-201ENST00000366856 BMP2KQ9NSY1 1161 aaPredicted RBP11.15□□□□□ -0.62
CNIH4-201ENST00000366856 TTLL13PA6NNM8 815 aa11.14□□□□□ -0.63
CNIH4-201ENST00000366856 TIE1P35590 1138 aa11.14□□□□□ -0.63
CNIH4-201ENST00000366856 EFCAB3Q8N7B9 438 aa11.12□□□□□ -0.63
CNIH4-201ENST00000366856 NKX1-1Q15270 411 aaPredicted RBP11.11□□□□□ -0.63
CNIH4-201ENST00000366856 TRIM35Q9UPQ4 493 aa11.11□□□□□ -0.63
CNIH4-201ENST00000366856 MKRN3Q13064 507 aaKnown RBP11.1□□□□□ -0.63
CNIH4-201ENST00000366856 PLCB2Q00722 1185 aa11.09□□□□□ -0.63
CNIH4-201ENST00000366856 SPRYD3Q8NCJ5 442 aa11.09□□□□□ -0.63
CNIH4-201ENST00000366856 ATN1P54259 1190 aaPredicted RBP11.08□□□□□ -0.64
CNIH4-201ENST00000366856 ATMINO43313 823 aaPredicted RBP11.06□□□□□ -0.64
CNIH4-201ENST00000366856 HAP1P54257 671 aaPredicted RBP11.05□□□□□ -0.64
CNIH4-201ENST00000366856 PHF8Q9UPP1 1060 aa11.04□□□□□ -0.64
CNIH4-201ENST00000366856 ASTLQ6HA08 431 aaPredicted RBP11.03□□□□□ -0.64
CNIH4-201ENST00000366856 MFRPQ9BY79 579 aa11.02□□□□□ -0.65
CNIH4-201ENST00000366856 DNAJC5Q9H3Z4 198 aa11.02□□□□□ -0.65
CNIH4-201ENST00000366856 SOX12O15370 315 aa11□□□□□ -0.65
CNIH4-201ENST00000366856 GTPBP6O43824 516 aaPredicted RBP11□□□□□ -0.65
CNIH4-201ENST00000366856 NLRP6P59044 892 aa11□□□□□ -0.65
CNIH4-201ENST00000366856 RYDENQ9NUL5 291 aaKnown RBP11□□□□□ -0.65
CNIH4-201ENST00000366856 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11□□□□□ -0.65
CNIH4-201ENST00000366856 SLC24A1O60721 1099 aa10.98□□□□□ -0.65
CNIH4-201ENST00000366856 PELP1Q8IZL8 1130 aaKnown RBP10.97□□□□□ -0.65
CNIH4-201ENST00000366856 SEC24BO95487 1268 aa10.96□□□□□ -0.65
CNIH4-201ENST00000366856 POTEIP0CG38 1075 aa10.95□□□□□ -0.66
CNIH4-201ENST00000366856 PLCG2P16885 1265 aa10.94□□□□□ -0.66
CNIH4-201ENST00000366856 FBXO22Q8NEZ5 403 aa10.93□□□□□ -0.66
CNIH4-201ENST00000366856 IER5LQ5T953 404 aa10.91□□□□□ -0.66
CNIH4-201ENST00000366856 SLC39A7Q92504 469 aa10.91□□□□□ -0.66
CNIH4-201ENST00000366856 MS4A4AQ96JQ5 239 aa10.91□□□□□ -0.66
CNIH4-201ENST00000366856 METRNQ9UJH8 293 aa10.91□□□□□ -0.66
CNIH4-201ENST00000366856 TSHZ2Q9NRE2 1034 aa10.9□□□□□ -0.66
CNIH4-201ENST00000366856 PPP1R37O75864 691 aa10.89□□□□□ -0.67
CNIH4-201ENST00000366856 DPY19L2Q6NUT2 758 aa10.88□□□□□ -0.67
CNIH4-201ENST00000366856 OCEL1Q9H607 264 aa10.88□□□□□ -0.67
CNIH4-201ENST00000366856 C7P10643 843 aa10.87□□□□□ -0.67
CNIH4-201ENST00000366856 IRX5P78411 483 aaPredicted RBP10.87□□□□□ -0.67
CNIH4-201ENST00000366856 COLQQ9Y215 455 aaPredicted RBP10.87□□□□□ -0.67
CNIH4-201ENST00000366856 G3V3G9 751 aa10.86□□□□□ -0.67
CNIH4-201ENST00000366856 PDCD7Q8N8D1 485 aaKnown RBP10.85□□□□□ -0.67
CNIH4-201ENST00000366856 ILDR1Q86SU0 546 aaPredicted RBP10.79□□□□□ -0.68
CNIH4-201ENST00000366856 POTEFA5A3E0 1075 aa10.78□□□□□ -0.68
CNIH4-201ENST00000366856 BOLA1Q9Y3E2 137 aa10.78□□□□□ -0.68
CNIH4-201ENST00000366856 CADPS2Q86UW7 1296 aa10.76□□□□□ -0.69
CNIH4-201ENST00000366856 MICALL2Q8IY33 904 aa10.76□□□□□ -0.69
CNIH4-201ENST00000366856 L3MBTL3Q96JM7 780 aaPredicted RBP10.75□□□□□ -0.69
CNIH4-201ENST00000366856 C3orf67Q6ZVT6 689 aa10.72□□□□□ -0.69
CNIH4-201ENST00000366856 VSIG10Q8N0Z9 540 aa10.72□□□□□ -0.69
CNIH4-201ENST00000366856 KDM2AQ9Y2K7 1162 aa10.7□□□□□ -0.7
CNIH4-201ENST00000366856 WDR70Q9NW82 654 aa10.68□□□□□ -0.7
CNIH4-201ENST00000366856 TMC2Q8TDI7 906 aa10.66□□□□□ -0.7
CNIH4-201ENST00000366856 LARP6Q9BRS8 491 aaKnown RBP10.66□□□□□ -0.7
CNIH4-201ENST00000366856 PDE4AP27815 886 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms