RNA–Protein interactions for RNA: ENST00000365690.4

MIR539-201, microRNA 539, humanhuman

BASIC

Gene MIR539, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR539-201ENST00000365690 POTEFA5A3E0 1075 aa7.78□□□□□ -1.16
MIR539-201ENST00000365690 C7P10643 843 aa7.78□□□□□ -1.16
MIR539-201ENST00000365690 SLC39A7Q92504 469 aa7.78□□□□□ -1.16
MIR539-201ENST00000365690 PAK3O75914 559 aaPredicted RBP7.77□□□□□ -1.17
MIR539-201ENST00000365690 FAM163AQ96GL9 167 aaPredicted RBP7.76□□□□□ -1.17
MIR539-201ENST00000365690 ATN1P54259 1190 aaPredicted RBP7.74□□□□□ -1.17
MIR539-201ENST00000365690 MAMSTRQ6ZN01 415 aa7.72□□□□□ -1.17
MIR539-201ENST00000365690 NPM1P06748 294 aaKnown RBP eCLIP7.7□□□□□ -1.18
MIR539-201ENST00000365690 TRPC6Q9Y210 931 aa7.7□□□□□ -1.18
MIR539-201ENST00000365690 SPDYE4A6NLX3 237 aa7.68□□□□□ -1.18
MIR539-201ENST00000365690 CCDC61Q9Y6R9 512 aa7.67□□□□□ -1.18
MIR539-201ENST00000365690 SCUBE2Q9NQ36 999 aa7.66□□□□□ -1.18
MIR539-201ENST00000365690 BMP2KQ9NSY1 1161 aaPredicted RBP7.66□□□□□ -1.18
MIR539-201ENST00000365690 KIF12Q96FN5 646 aa7.65□□□□□ -1.18
MIR539-201ENST00000365690 CDAN1Q8IWY9 1227 aa7.64□□□□□ -1.19
MIR539-201ENST00000365690 COLQQ9Y215 455 aaPredicted RBP7.64□□□□□ -1.19
MIR539-201ENST00000365690 CSRNP3Q8WYN3 585 aa7.63□□□□□ -1.19
MIR539-201ENST00000365690 TSPYL2Q9H2G4 693 aaPredicted RBP7.63□□□□□ -1.19
MIR539-201ENST00000365690 MAP3K13O43283 966 aa7.57□□□□□ -1.2
MIR539-201ENST00000365690 TIE1P35590 1138 aa7.56□□□□□ -1.2
MIR539-201ENST00000365690 TTLL13PA6NNM8 815 aa7.54□□□□□ -1.2
MIR539-201ENST00000365690 ST18O60284 1047 aa7.54□□□□□ -1.2
MIR539-201ENST00000365690 PROM2Q8N271 834 aa7.52□□□□□ -1.21
MIR539-201ENST00000365690 MMRN1Q13201 1228 aa7.51□□□□□ -1.21
MIR539-201ENST00000365690 RASEFQ8IZ41 740 aa7.51□□□□□ -1.21
MIR539-201ENST00000365690 SPNS2Q8IVW8 549 aa7.49□□□□□ -1.21
MIR539-201ENST00000365690 SEC24BO95487 1268 aa7.48□□□□□ -1.21
MIR539-201ENST00000365690 TRIM35Q9UPQ4 493 aa7.48□□□□□ -1.21
MIR539-201ENST00000365690 SLAIN1Q8ND83 568 aa7.47□□□□□ -1.21
MIR539-201ENST00000365690 IER5LQ5T953 404 aa7.46□□□□□ -1.22
MIR539-201ENST00000365690 IRX5P78411 483 aaPredicted RBP7.39□□□□□ -1.23
MIR539-201ENST00000365690 IFNL1Q8IU54 200 aa7.39□□□□□ -1.23
MIR539-201ENST00000365690 SGIP1Q9BQI5 828 aa7.39□□□□□ -1.23
MIR539-201ENST00000365690 PCDHB13Q9Y5F0 798 aa7.38□□□□□ -1.23
MIR539-201ENST00000365690 MARVELD3Q96A59 401 aa7.37□□□□□ -1.23
MIR539-201ENST00000365690 POTEB3A0JP26 581 aa7.35□□□□□ -1.23
MIR539-201ENST00000365690 POTEBQ6S5H4 581 aa7.35□□□□□ -1.23
MIR539-201ENST00000365690 TMEM121BQ9BXQ6 578 aaPredicted RBP7.35□□□□□ -1.23
MIR539-201ENST00000365690 NUBP1P53384 320 aa7.34□□□□□ -1.23
MIR539-201ENST00000365690 MIER1Q8N108 512 aa7.34□□□□□ -1.23
MIR539-201ENST00000365690 TMEM106CQ9BVX2 250 aa7.34□□□□□ -1.23
MIR539-201ENST00000365690 PLCG2P16885 1265 aa7.33□□□□□ -1.24
MIR539-201ENST00000365690 KRTAP3-3Q9BYR6 98 aa7.32□□□□□ -1.24
MIR539-201ENST00000365690 KRTAP3-2Q9BYR7 98 aa7.32□□□□□ -1.24
MIR539-201ENST00000365690 OCEL1Q9H607 264 aa7.28□□□□□ -1.24
MIR539-201ENST00000365690 SNPHO15079 494 aa7.25□□□□□ -1.25
MIR539-201ENST00000365690 PLEKHG5O94827 1062 aa7.24□□□□□ -1.25
MIR539-201ENST00000365690 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.24□□□□□ -1.25
MIR539-201ENST00000365690 PDCD7Q8N8D1 485 aaKnown RBP7.23□□□□□ -1.25
MIR539-201ENST00000365690 HS3ST6Q96QI5 342 aa7.23□□□□□ -1.25
MIR539-201ENST00000365690 EMP3P54852 163 aa7.22□□□□□ -1.25
MIR539-201ENST00000365690 EHMT2Q96KQ7 1210 aa7.22□□□□□ -1.25
MIR539-201ENST00000365690 PLCD3Q8N3E9 789 aa7.2□□□□□ -1.26
MIR539-201ENST00000365690 FAM205CA6NFA0 338 aa7.19□□□□□ -1.26
MIR539-201ENST00000365690 PCDHB8Q9UN66 801 aa7.19□□□□□ -1.26
MIR539-201ENST00000365690 FAM212AQ96EL1 285 aa7.17□□□□□ -1.26
MIR539-201ENST00000365690 PYGBP11216 843 aa7.16□□□□□ -1.26
MIR539-201ENST00000365690 HOXB3P14651 431 aaPredicted RBP7.12□□□□□ -1.27
MIR539-201ENST00000365690 ZBTB47Q9UFB7 747 aaPredicted RBP7.12□□□□□ -1.27
MIR539-201ENST00000365690 C3orf67Q6ZVT6 689 aa7.11□□□□□ -1.27
MIR539-201ENST00000365690 ILDR1Q86SU0 546 aaPredicted RBP7.1□□□□□ -1.27
MIR539-201ENST00000365690 DCAF8Q5TAQ9 597 aa7.08□□□□□ -1.28
MIR539-201ENST00000365690 DPY19L2Q6NUT2 758 aa7.08□□□□□ -1.28
MIR539-201ENST00000365690 L3MBTL3Q96JM7 780 aaPredicted RBP7.08□□□□□ -1.28
MIR539-201ENST00000365690 HOXB1P14653 301 aaPredicted RBP7.05□□□□□ -1.28
MIR539-201ENST00000365690 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.05□□□□□ -1.28
MIR539-201ENST00000365690 RNF166Q96A37 237 aaPredicted RBP7.04□□□□□ -1.28
MIR539-201ENST00000365690 MKRN3Q13064 507 aaKnown RBP7.03□□□□□ -1.28
MIR539-201ENST00000365690 PSEN1P49768 467 aa6.99□□□□□ -1.29
MIR539-201ENST00000365690 ZNF467Q7Z7K2 595 aaPredicted RBP6.99□□□□□ -1.29
MIR539-201ENST00000365690 MYT1LQ9UL68 1186 aa6.98□□□□□ -1.29
MIR539-201ENST00000365690 ERBB3P21860 1342 aa6.98□□□□□ -1.29
MIR539-201ENST00000365690 GOLGA2Q08379 1002 aa6.97□□□□□ -1.29
MIR539-201ENST00000365690 CHRM1P11229 460 aaPredicted RBP6.96□□□□□ -1.3
MIR539-201ENST00000365690 VARS2Q5ST30 1063 aaKnown RBP6.96□□□□□ -1.3
MIR539-201ENST00000365690 BOLA1Q9Y3E2 137 aa6.96□□□□□ -1.3
MIR539-201ENST00000365690 TMEM92Q6UXU6 159 aa6.93□□□□□ -1.3
MIR539-201ENST00000365690 ZNF687Q8N1G0 1237 aa6.93□□□□□ -1.3
MIR539-201ENST00000365690 ZNF710Q8N1W2 664 aa6.93□□□□□ -1.3
MIR539-201ENST00000365690 DOK7Q18PE1 504 aa6.92□□□□□ -1.3
MIR539-201ENST00000365690 GSE1Q14687 1217 aa6.9□□□□□ -1.3
MIR539-201ENST00000365690 GPR153Q6NV75 609 aa6.9□□□□□ -1.3
MIR539-201ENST00000365690 CABP2Q9NPB3 220 aa6.9□□□□□ -1.3
MIR539-201ENST00000365690 PDAP1Q13442 181 aaKnown RBP6.89□□□□□ -1.31
MIR539-201ENST00000365690 FKBP8Q14318 412 aa6.87□□□□□ -1.31
MIR539-201ENST00000365690 ZSWIM6Q9HCJ5 1215 aa6.84□□□□□ -1.31
MIR539-201ENST00000365690 G3V3G9 751 aa6.83□□□□□ -1.32
MIR539-201ENST00000365690 RIMBP2O15034 1052 aa6.83□□□□□ -1.32
MIR539-201ENST00000365690 PTGER2P43116 358 aa6.83□□□□□ -1.32
MIR539-201ENST00000365690 ANKRD13DQ6ZTN6 518 aa6.82□□□□□ -1.32
MIR539-201ENST00000365690 MICALL2Q8IY33 904 aa6.82□□□□□ -1.32
MIR539-201ENST00000365690 POTEEQ6S8J3 1075 aa6.81□□□□□ -1.32
MIR539-201ENST00000365690 KHSRPQ92945 711 aaKnown RBP eCLIP6.81□□□□□ -1.32
MIR539-201ENST00000365690 ARSIQ5FYB1 569 aa6.8□□□□□ -1.32
MIR539-201ENST00000365690 KLHL34Q8N239 644 aa6.8□□□□□ -1.32
MIR539-201ENST00000365690 EFCAB3Q8N7B9 438 aa6.8□□□□□ -1.32
MIR539-201ENST00000365690 VASPP50552 380 aaPredicted RBP6.79□□□□□ -1.32
MIR539-201ENST00000365690 LSM11P83369 360 aaKnown RBP eCLIP6.79□□□□□ -1.32
MIR539-201ENST00000365690 MS4A4AQ96JQ5 239 aa6.78□□□□□ -1.32
MIR539-201ENST00000365690 ZNF316A6NFI3 1004 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms