RNA–Protein interactions for RNA: ENST00000364876.1

RNU6-828P-201, Transcript of RNA, U6 small nuclear 828, pseudogene, humanhuman

BASIC

Gene RNU6-828P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-828P-201ENST00000364876 KRTAP1-3Q8IUG1 177 aa2.32□□□□□ -2.04
RNU6-828P-201ENST00000364876 KRTAP9-2Q9BYQ4 174 aa2.32□□□□□ -2.04
RNU6-828P-201ENST00000364876 PHF12Q96QT6 1004 aa2.31□□□□□ -2.04
RNU6-828P-201ENST00000364876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.3□□□□□ -2.04
RNU6-828P-201ENST00000364876 LCE2BO14633 110 aa2.3□□□□□ -2.04
RNU6-828P-201ENST00000364876 EMP3P54852 163 aa2.3□□□□□ -2.04
RNU6-828P-201ENST00000364876 SUZ12Q15022 739 aaKnown RBP2.3□□□□□ -2.04
RNU6-828P-201ENST00000364876 HNRNPUL2Q1KMD3 747 aaKnown RBP2.3□□□□□ -2.04
RNU6-828P-201ENST00000364876 ZBTB12Q9Y330 459 aaPredicted RBP2.3□□□□□ -2.04
RNU6-828P-201ENST00000364876 FAM205CA6NFA0 338 aa2.29□□□□□ -2.04
RNU6-828P-201ENST00000364876 SLC4A2P04920 1241 aa2.28□□□□□ -2.04
RNU6-828P-201ENST00000364876 ATN1P54259 1190 aaPredicted RBP2.28□□□□□ -2.04
RNU6-828P-201ENST00000364876 SAMD1Q6SPF0 538 aaPredicted RBP2.28□□□□□ -2.04
RNU6-828P-201ENST00000364876 COLQQ9Y215 455 aaPredicted RBP2.28□□□□□ -2.04
RNU6-828P-201ENST00000364876 Q6ZNB5 142 aa2.25□□□□□ -2.05
RNU6-828P-201ENST00000364876 MS4A3Q96HJ5 214 aa2.24□□□□□ -2.05
RNU6-828P-201ENST00000364876 KRTAP4-8A0A0G2JLE6 195 aa2.23□□□□□ -2.05
RNU6-828P-201ENST00000364876 ZNF775Q96BV0 537 aaPredicted RBP2.23□□□□□ -2.05
RNU6-828P-201ENST00000364876 RGS20O76081 388 aa2.22□□□□□ -2.05
RNU6-828P-201ENST00000364876 PRR29P0C7W0 189 aa2.22□□□□□ -2.05
RNU6-828P-201ENST00000364876 ATF5Q9Y2D1 282 aaPredicted RBP2.22□□□□□ -2.05
RNU6-828P-201ENST00000364876 SPDYE2BA6NHP3 402 aa2.21□□□□□ -2.06
RNU6-828P-201ENST00000364876 SNPHO15079 494 aa2.21□□□□□ -2.06
RNU6-828P-201ENST00000364876 SPDYE6P0CI01 402 aa2.21□□□□□ -2.06
RNU6-828P-201ENST00000364876 SPDYE2Q495Y8 402 aa2.21□□□□□ -2.06
RNU6-828P-201ENST00000364876 KRTAP9-9Q9BYP9 154 aa2.21□□□□□ -2.06
RNU6-828P-201ENST00000364876 KRTAP9-4Q9BYQ2 154 aa2.21□□□□□ -2.06
RNU6-828P-201ENST00000364876 PTGER2P43116 358 aa2.18□□□□□ -2.06
RNU6-828P-201ENST00000364876 LCE3BQ5TA77 95 aa2.17□□□□□ -2.06
RNU6-828P-201ENST00000364876 KRTAP4-7Q9BYR0 210 aa2.17□□□□□ -2.06
RNU6-828P-201ENST00000364876 XP32Q5T750 250 aa2.16□□□□□ -2.06
RNU6-828P-201ENST00000364876 BMP2KQ9NSY1 1161 aaPredicted RBP2.16□□□□□ -2.06
RNU6-828P-201ENST00000364876 SEC24BO95487 1268 aa2.15□□□□□ -2.07
RNU6-828P-201ENST00000364876 LCE2AQ5TA79 106 aaPredicted RBP2.15□□□□□ -2.07
RNU6-828P-201ENST00000364876 KRTAP5-3Q6L8H2 238 aa2.15□□□□□ -2.07
RNU6-828P-201ENST00000364876 KRTAP9-8Q9BYQ0 159 aa2.15□□□□□ -2.07
RNU6-828P-201ENST00000364876 TRAF7Q6Q0C0 670 aa2.14□□□□□ -2.07
RNU6-828P-201ENST00000364876 PSMG3-AS1Q96PY0 264 aa2.14□□□□□ -2.07
RNU6-828P-201ENST00000364876 SSUH2Q9Y2M2 353 aa2.14□□□□□ -2.07
RNU6-828P-201ENST00000364876 NPM3O75607 178 aaKnown RBP2.13□□□□□ -2.07
RNU6-828P-201ENST00000364876 HCSTQ9UBK5 93 aa2.12□□□□□ -2.07
RNU6-828P-201ENST00000364876 STK17AQ9UEE5 414 aa2.12□□□□□ -2.07
RNU6-828P-201ENST00000364876 TRPC6Q9Y210 931 aa2.12□□□□□ -2.07
RNU6-828P-201ENST00000364876 ZNF787Q6DD87 383 aa2.11□□□□□ -2.07
RNU6-828P-201ENST00000364876 KRTAP4-2Q9BYR5 136 aa2.11□□□□□ -2.07
RNU6-828P-201ENST00000364876 KRTAP4-12Q9BQ66 201 aa2.1□□□□□ -2.07
RNU6-828P-201ENST00000364876 PAK3O75914 559 aaPredicted RBP2.09□□□□□ -2.07
RNU6-828P-201ENST00000364876 A0A0G2JS52 829 aa2.08□□□□□ -2.08
RNU6-828P-201ENST00000364876 IER5LQ5T953 404 aa2.08□□□□□ -2.08
RNU6-828P-201ENST00000364876 TIE1P35590 1138 aa2.06□□□□□ -2.08
RNU6-828P-201ENST00000364876 IFFO2Q5TF58 517 aa2.06□□□□□ -2.08
RNU6-828P-201ENST00000364876 ERBB3P21860 1342 aa2.06□□□□□ -2.08
RNU6-828P-201ENST00000364876 TTLL13PA6NNM8 815 aa2.05□□□□□ -2.08
RNU6-828P-201ENST00000364876 BTBD11A6QL63 1104 aa2.05□□□□□ -2.08
RNU6-828P-201ENST00000364876 NCBP3Q53F19 620 aaKnown RBP2.05□□□□□ -2.08
RNU6-828P-201ENST00000364876 VARS2Q5ST30 1063 aaKnown RBP2.05□□□□□ -2.08
RNU6-828P-201ENST00000364876 TREML4Q6UXN2 200 aa2.05□□□□□ -2.08
RNU6-828P-201ENST00000364876 CREBZFQ9NS37 354 aa2.05□□□□□ -2.08
RNU6-828P-201ENST00000364876 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.05□□□□□ -2.08
RNU6-828P-201ENST00000364876 ANKRD13DQ6ZTN6 518 aa2.04□□□□□ -2.08
RNU6-828P-201ENST00000364876 ZNF687Q8N1G0 1237 aa2.04□□□□□ -2.08
RNU6-828P-201ENST00000364876 KRTAP4-9Q9BYQ8 210 aa2.04□□□□□ -2.08
RNU6-828P-201ENST00000364876 HOXB1P14653 301 aaPredicted RBP2.03□□□□□ -2.08
RNU6-828P-201ENST00000364876 LAPTM4AQ15012 233 aa2.03□□□□□ -2.08
RNU6-828P-201ENST00000364876 LCE1DQ5T752 114 aa2.03□□□□□ -2.08
RNU6-828P-201ENST00000364876 TRIM35Q9UPQ4 493 aa2.03□□□□□ -2.08
RNU6-828P-201ENST00000364876 ZNF692Q9BU19 519 aaPredicted RBP2.02□□□□□ -2.09
RNU6-828P-201ENST00000364876 HOXB3P14651 431 aaPredicted RBP2.01□□□□□ -2.09
RNU6-828P-201ENST00000364876 PLCG2P16885 1265 aa2□□□□□ -2.09
RNU6-828P-201ENST00000364876 IRX5P78411 483 aaPredicted RBP2□□□□□ -2.09
RNU6-828P-201ENST00000364876 PABPN1Q86U42 306 aaKnown RBP eCLIP2□□□□□ -2.09
RNU6-828P-201ENST00000364876 LSM11P83369 360 aaKnown RBP eCLIP1.99□□□□□ -2.09
RNU6-828P-201ENST00000364876 KIF12Q96FN5 646 aa1.99□□□□□ -2.09
RNU6-828P-201ENST00000364876 GFRA3O60609 400 aa1.98□□□□□ -2.09
RNU6-828P-201ENST00000364876 LORP23490 312 aaPredicted RBP1.98□□□□□ -2.09
RNU6-828P-201ENST00000364876 WIPF1O43516 503 aa1.97□□□□□ -2.09
RNU6-828P-201ENST00000364876 POTECB2RU33 542 aa1.95□□□□□ -2.1
RNU6-828P-201ENST00000364876 INSM1Q01101 510 aaPredicted RBP1.95□□□□□ -2.1
RNU6-828P-201ENST00000364876 KRTAP19-1Q8IUB9 90 aa1.95□□□□□ -2.1
RNU6-828P-201ENST00000364876 CCDC61Q9Y6R9 512 aa1.95□□□□□ -2.1
RNU6-828P-201ENST00000364876 NRG2O14511 850 aaPredicted RBP1.94□□□□□ -2.1
RNU6-828P-201ENST00000364876 MYCNP04198 464 aaPredicted RBP1.94□□□□□ -2.1
RNU6-828P-201ENST00000364876 MNX1P50219 401 aaPredicted RBP1.94□□□□□ -2.1
RNU6-828P-201ENST00000364876 KRTAP4-5Q9BYR2 181 aa1.94□□□□□ -2.1
RNU6-828P-201ENST00000364876 ANO8Q9HCE9 1232 aaPredicted RBP1.94□□□□□ -2.1
RNU6-828P-201ENST00000364876 POTEEQ6S8J3 1075 aa1.93□□□□□ -2.1
RNU6-828P-201ENST00000364876 MAP3K13O43283 966 aa1.92□□□□□ -2.1
RNU6-828P-201ENST00000364876 LCE2CQ5TA81 110 aa1.92□□□□□ -2.1
RNU6-828P-201ENST00000364876 MKRN4PQ13434 485 aaPredicted RBP1.91□□□□□ -2.1
RNU6-828P-201ENST00000364876 C3orf67Q6ZVT6 689 aa1.91□□□□□ -2.1
RNU6-828P-201ENST00000364876 KCTD17Q8N5Z5 321 aa1.91□□□□□ -2.1
RNU6-828P-201ENST00000364876 KRTAP4-11Q9BYQ6 195 aa1.91□□□□□ -2.1
RNU6-828P-201ENST00000364876 OCEL1Q9H607 264 aa1.91□□□□□ -2.1
RNU6-828P-201ENST00000364876 WFS1O76024 890 aa1.9□□□□□ -2.11
RNU6-828P-201ENST00000364876 ZNF710Q8N1W2 664 aa1.9□□□□□ -2.11
RNU6-828P-201ENST00000364876 FBLN2P98095 1184 aa1.89□□□□□ -2.11
RNU6-828P-201ENST00000364876 NPM1P06748 294 aaKnown RBP eCLIP1.88□□□□□ -2.11
RNU6-828P-201ENST00000364876 NFX1Q12986 1120 aaKnown RBP1.88□□□□□ -2.11
RNU6-828P-201ENST00000364876 KCTD12Q96CX2 325 aaKnown RBP1.88□□□□□ -2.11
RNU6-828P-201ENST00000364876 GSK3AP49840 483 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms