RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 TRIM41Q8WV44 630 aa11.17□□□□□ -0.62
RNU6-560P-201ENST00000364007 RNF25Q96BH1 459 aaPredicted RBP11.14□□□□□ -0.63
RNU6-560P-201ENST00000364007 PYGBP11216 843 aa11.13□□□□□ -0.63
RNU6-560P-201ENST00000364007 CHRM1P11229 460 aaPredicted RBP11.1□□□□□ -0.63
RNU6-560P-201ENST00000364007 CCDC61Q9Y6R9 512 aa11.06□□□□□ -0.64
RNU6-560P-201ENST00000364007 RIOK3O14730 519 aaKnown RBP11.04□□□□□ -0.64
RNU6-560P-201ENST00000364007 CHGAP10645 457 aaKnown RBP11.04□□□□□ -0.64
RNU6-560P-201ENST00000364007 SLC24A1O60721 1099 aa11.03□□□□□ -0.64
RNU6-560P-201ENST00000364007 PAK3O75914 559 aaPredicted RBP11.01□□□□□ -0.65
RNU6-560P-201ENST00000364007 CD44P16070 742 aaKnown RBP11.01□□□□□ -0.65
RNU6-560P-201ENST00000364007 ZRANB1Q9UGI0 708 aa11□□□□□ -0.65
RNU6-560P-201ENST00000364007 BBXQ8WY36 941 aaPredicted RBP10.98□□□□□ -0.65
RNU6-560P-201ENST00000364007 PLCB2Q00722 1185 aa10.97□□□□□ -0.65
RNU6-560P-201ENST00000364007 VGFO15240 615 aaPredicted RBP10.96□□□□□ -0.65
RNU6-560P-201ENST00000364007 PCDHB8Q9UN66 801 aa10.96□□□□□ -0.65
RNU6-560P-201ENST00000364007 PCDHB13Q9Y5F0 798 aa10.96□□□□□ -0.65
RNU6-560P-201ENST00000364007 C19orf67A6NJJ6 358 aa10.95□□□□□ -0.66
RNU6-560P-201ENST00000364007 HS6ST3Q8IZP7 471 aa10.95□□□□□ -0.66
RNU6-560P-201ENST00000364007 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.94□□□□□ -0.66
RNU6-560P-201ENST00000364007 MAP3K13O43283 966 aa10.94□□□□□ -0.66
RNU6-560P-201ENST00000364007 KIF12Q96FN5 646 aa10.94□□□□□ -0.66
RNU6-560P-201ENST00000364007 ZFP91Q96JP5 570 aaPredicted RBP10.94□□□□□ -0.66
RNU6-560P-201ENST00000364007 PHF12Q96QT6 1004 aa10.94□□□□□ -0.66
RNU6-560P-201ENST00000364007 TAOK2Q9UL54 1235 aa10.93□□□□□ -0.66
RNU6-560P-201ENST00000364007 STK25O00506 426 aa10.92□□□□□ -0.66
RNU6-560P-201ENST00000364007 ZNF467Q7Z7K2 595 aaPredicted RBP10.92□□□□□ -0.66
RNU6-560P-201ENST00000364007 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.92□□□□□ -0.66
RNU6-560P-201ENST00000364007 SGIP1Q9BQI5 828 aa10.91□□□□□ -0.66
RNU6-560P-201ENST00000364007 PAXIP1Q6ZW49 1069 aaPredicted RBP10.9□□□□□ -0.66
RNU6-560P-201ENST00000364007 IFNL1Q8IU54 200 aa10.9□□□□□ -0.66
RNU6-560P-201ENST00000364007 ZNF579Q8NAF0 562 aaKnown RBP10.89□□□□□ -0.67
RNU6-560P-201ENST00000364007 CFAP44Q96MT7 982 aa10.89□□□□□ -0.67
RNU6-560P-201ENST00000364007 BCL11BQ9C0K0 894 aaPredicted RBP10.89□□□□□ -0.67
RNU6-560P-201ENST00000364007 STK24Q9Y6E0 443 aa10.88□□□□□ -0.67
RNU6-560P-201ENST00000364007 HAX1O00165 279 aa10.87□□□□□ -0.67
RNU6-560P-201ENST00000364007 EVX2Q03828 476 aa10.87□□□□□ -0.67
RNU6-560P-201ENST00000364007 NKX1-1Q15270 411 aaPredicted RBP10.86□□□□□ -0.67
RNU6-560P-201ENST00000364007 PDAP1Q13442 181 aaKnown RBP10.85□□□□□ -0.67
RNU6-560P-201ENST00000364007 DNAJC5Q9H3Z4 198 aa10.85□□□□□ -0.67
RNU6-560P-201ENST00000364007 PSEN1P49768 467 aa10.84□□□□□ -0.67
RNU6-560P-201ENST00000364007 HAP1P54257 671 aaPredicted RBP10.84□□□□□ -0.67
RNU6-560P-201ENST00000364007 SPRYD3Q8NCJ5 442 aa10.84□□□□□ -0.67
RNU6-560P-201ENST00000364007 MS4A3Q96HJ5 214 aa10.8□□□□□ -0.68
RNU6-560P-201ENST00000364007 TRPC6Q9Y210 931 aa10.8□□□□□ -0.68
RNU6-560P-201ENST00000364007 POTEHQ6S545 545 aa10.77□□□□□ -0.69
RNU6-560P-201ENST00000364007 GTPBP6O43824 516 aaPredicted RBP10.76□□□□□ -0.69
RNU6-560P-201ENST00000364007 GALR2O43603 387 aaPredicted RBP10.73□□□□□ -0.69
RNU6-560P-201ENST00000364007 TSHZ2Q9NRE2 1034 aa10.73□□□□□ -0.69
RNU6-560P-201ENST00000364007 CABP2Q9NPB3 220 aa10.72□□□□□ -0.69
RNU6-560P-201ENST00000364007 TMEM106CQ9BVX2 250 aa10.7□□□□□ -0.7
RNU6-560P-201ENST00000364007 EFCAB3Q8N7B9 438 aa10.69□□□□□ -0.7
RNU6-560P-201ENST00000364007 MFRPQ9BY79 579 aa10.66□□□□□ -0.7
RNU6-560P-201ENST00000364007 KDM2AQ9Y2K7 1162 aa10.65□□□□□ -0.7
RNU6-560P-201ENST00000364007 TIE1P35590 1138 aa10.64□□□□□ -0.71
RNU6-560P-201ENST00000364007 VSIG10Q8N0Z9 540 aa10.64□□□□□ -0.71
RNU6-560P-201ENST00000364007 BMP2KQ9NSY1 1161 aaPredicted RBP10.64□□□□□ -0.71
RNU6-560P-201ENST00000364007 TTLL13PA6NNM8 815 aa10.63□□□□□ -0.71
RNU6-560P-201ENST00000364007 PHF8Q9UPP1 1060 aa10.63□□□□□ -0.71
RNU6-560P-201ENST00000364007 GABBR2O75899 941 aa10.62□□□□□ -0.71
RNU6-560P-201ENST00000364007 SOX12O15370 315 aa10.61□□□□□ -0.71
RNU6-560P-201ENST00000364007 CLCN6P51797 869 aa10.61□□□□□ -0.71
RNU6-560P-201ENST00000364007 FBXO22Q8NEZ5 403 aa10.6□□□□□ -0.71
RNU6-560P-201ENST00000364007 RYDENQ9NUL5 291 aaKnown RBP10.6□□□□□ -0.71
RNU6-560P-201ENST00000364007 GOLGA2Q08379 1002 aa10.59□□□□□ -0.71
RNU6-560P-201ENST00000364007 PPP1R37O75864 691 aa10.58□□□□□ -0.72
RNU6-560P-201ENST00000364007 NLRP6P59044 892 aa10.58□□□□□ -0.72
RNU6-560P-201ENST00000364007 TRIM35Q9UPQ4 493 aa10.57□□□□□ -0.72
RNU6-560P-201ENST00000364007 ATN1P54259 1190 aaPredicted RBP10.56□□□□□ -0.72
RNU6-560P-201ENST00000364007 MKRN3Q13064 507 aaKnown RBP10.56□□□□□ -0.72
RNU6-560P-201ENST00000364007 ATMINO43313 823 aaPredicted RBP10.55□□□□□ -0.72
RNU6-560P-201ENST00000364007 MS4A4AQ96JQ5 239 aa10.54□□□□□ -0.72
RNU6-560P-201ENST00000364007 ASTLQ6HA08 431 aaPredicted RBP10.51□□□□□ -0.73
RNU6-560P-201ENST00000364007 CADPS2Q86UW7 1296 aa10.5□□□□□ -0.73
RNU6-560P-201ENST00000364007 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.49□□□□□ -0.73
RNU6-560P-201ENST00000364007 PELP1Q8IZL8 1130 aaKnown RBP10.48□□□□□ -0.73
RNU6-560P-201ENST00000364007 DCBLD2Q96PD2 775 aa10.47□□□□□ -0.73
RNU6-560P-201ENST00000364007 ILDR1Q86SU0 546 aaPredicted RBP10.46□□□□□ -0.73
RNU6-560P-201ENST00000364007 SP7Q8TDD2 431 aaPredicted RBP10.46□□□□□ -0.73
RNU6-560P-201ENST00000364007 DPY19L2Q6NUT2 758 aa10.45□□□□□ -0.74
RNU6-560P-201ENST00000364007 POTEIP0CG38 1075 aa10.43□□□□□ -0.74
RNU6-560P-201ENST00000364007 IRX5P78411 483 aaPredicted RBP10.42□□□□□ -0.74
RNU6-560P-201ENST00000364007 PDCD7Q8N8D1 485 aaKnown RBP10.41□□□□□ -0.74
RNU6-560P-201ENST00000364007 IER5LQ5T953 404 aa10.39□□□□□ -0.75
RNU6-560P-201ENST00000364007 OCEL1Q9H607 264 aa10.38□□□□□ -0.75
RNU6-560P-201ENST00000364007 COLQQ9Y215 455 aaPredicted RBP10.36□□□□□ -0.75
RNU6-560P-201ENST00000364007 POTEFA5A3E0 1075 aa10.34□□□□□ -0.75
RNU6-560P-201ENST00000364007 PLCG2P16885 1265 aa10.34□□□□□ -0.75
RNU6-560P-201ENST00000364007 NCKAP5LQ9HCH0 1330 aa10.33□□□□□ -0.76
RNU6-560P-201ENST00000364007 SLC39A7Q92504 469 aa10.33□□□□□ -0.76
RNU6-560P-201ENST00000364007 SEC24BO95487 1268 aa10.32□□□□□ -0.76
RNU6-560P-201ENST00000364007 WDR70Q9NW82 654 aa10.32□□□□□ -0.76
RNU6-560P-201ENST00000364007 MICALL2Q8IY33 904 aa10.31□□□□□ -0.76
RNU6-560P-201ENST00000364007 C7P10643 843 aa10.3□□□□□ -0.76
RNU6-560P-201ENST00000364007 BCANQ96GW7 911 aa10.3□□□□□ -0.76
RNU6-560P-201ENST00000364007 LARP6Q9BRS8 491 aaKnown RBP10.3□□□□□ -0.76
RNU6-560P-201ENST00000364007 METRNQ9UJH8 293 aa10.3□□□□□ -0.76
RNU6-560P-201ENST00000364007 CRISPLD2Q9H0B8 497 aa10.29□□□□□ -0.76
RNU6-560P-201ENST00000364007 BOLA1Q9Y3E2 137 aa10.29□□□□□ -0.76
RNU6-560P-201ENST00000364007 PDE4AP27815 886 aa10.28□□□□□ -0.76
RNU6-560P-201ENST00000364007 TMEM121BQ9BXQ6 578 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms