RNA–Protein interactions for RNA: ENST00000363727.1

RNU1-87P-201, Transcript of RNA, U1 small nuclear 87, pseudogene, humanhuman

BASIC

Gene RNU1-87P, Length 170 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-87P-201ENST00000363727 PIP4P2Q8N4L2 257 aa11.36□□□□□ -0.59
RNU1-87P-201ENST00000363727 TSPYL2Q9H2G4 693 aaPredicted RBP11.35□□□□□ -0.59
RNU1-87P-201ENST00000363727 PYGBP11216 843 aa11.31□□□□□ -0.6
RNU1-87P-201ENST00000363727 RNF25Q96BH1 459 aaPredicted RBP11.31□□□□□ -0.6
RNU1-87P-201ENST00000363727 CHGAP10645 457 aaKnown RBP11.29□□□□□ -0.6
RNU1-87P-201ENST00000363727 PLCB2Q00722 1185 aa11.27□□□□□ -0.61
RNU1-87P-201ENST00000363727 RIOK3O14730 519 aaKnown RBP11.25□□□□□ -0.61
RNU1-87P-201ENST00000363727 BBXQ8WY36 941 aaPredicted RBP11.23□□□□□ -0.61
RNU1-87P-201ENST00000363727 CHRM1P11229 460 aaPredicted RBP11.22□□□□□ -0.61
RNU1-87P-201ENST00000363727 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.22□□□□□ -0.61
RNU1-87P-201ENST00000363727 PAK3O75914 559 aaPredicted RBP11.19□□□□□ -0.62
RNU1-87P-201ENST00000363727 HAP1P54257 671 aaPredicted RBP11.19□□□□□ -0.62
RNU1-87P-201ENST00000363727 PAXIP1Q6ZW49 1069 aaPredicted RBP11.19□□□□□ -0.62
RNU1-87P-201ENST00000363727 CFAP44Q96MT7 982 aa11.18□□□□□ -0.62
RNU1-87P-201ENST00000363727 TAOK2Q9UL54 1235 aa11.17□□□□□ -0.62
RNU1-87P-201ENST00000363727 VGFO15240 615 aaPredicted RBP11.16□□□□□ -0.62
RNU1-87P-201ENST00000363727 HS6ST3Q8IZP7 471 aa11.16□□□□□ -0.62
RNU1-87P-201ENST00000363727 CCDC61Q9Y6R9 512 aa11.16□□□□□ -0.62
RNU1-87P-201ENST00000363727 STK25O00506 426 aa11.15□□□□□ -0.62
RNU1-87P-201ENST00000363727 CD44P16070 742 aaKnown RBP11.13□□□□□ -0.63
RNU1-87P-201ENST00000363727 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.12□□□□□ -0.63
RNU1-87P-201ENST00000363727 ZFP91Q96JP5 570 aaPredicted RBP11.12□□□□□ -0.63
RNU1-87P-201ENST00000363727 ZRANB1Q9UGI0 708 aa11.12□□□□□ -0.63
RNU1-87P-201ENST00000363727 PCDHB8Q9UN66 801 aa11.12□□□□□ -0.63
RNU1-87P-201ENST00000363727 PCDHB13Q9Y5F0 798 aa11.12□□□□□ -0.63
RNU1-87P-201ENST00000363727 STK24Q9Y6E0 443 aa11.1□□□□□ -0.63
RNU1-87P-201ENST00000363727 ZNF467Q7Z7K2 595 aaPredicted RBP11.09□□□□□ -0.63
RNU1-87P-201ENST00000363727 SPRYD3Q8NCJ5 442 aa11.09□□□□□ -0.63
RNU1-87P-201ENST00000363727 BCL11BQ9C0K0 894 aaPredicted RBP11.09□□□□□ -0.63
RNU1-87P-201ENST00000363727 MAP3K13O43283 966 aa11.06□□□□□ -0.64
RNU1-87P-201ENST00000363727 PHF12Q96QT6 1004 aa11.06□□□□□ -0.64
RNU1-87P-201ENST00000363727 NKX1-1Q15270 411 aaPredicted RBP11.05□□□□□ -0.64
RNU1-87P-201ENST00000363727 KIF12Q96FN5 646 aa11.04□□□□□ -0.64
RNU1-87P-201ENST00000363727 SGIP1Q9BQI5 828 aa11.04□□□□□ -0.64
RNU1-87P-201ENST00000363727 PDAP1Q13442 181 aaKnown RBP11.03□□□□□ -0.64
RNU1-87P-201ENST00000363727 IFNL1Q8IU54 200 aa11.03□□□□□ -0.64
RNU1-87P-201ENST00000363727 ZNF579Q8NAF0 562 aaKnown RBP11.03□□□□□ -0.64
RNU1-87P-201ENST00000363727 PSEN1P49768 467 aa11.01□□□□□ -0.65
RNU1-87P-201ENST00000363727 C19orf67A6NJJ6 358 aa11□□□□□ -0.65
RNU1-87P-201ENST00000363727 DNAJC5Q9H3Z4 198 aa10.99□□□□□ -0.65
RNU1-87P-201ENST00000363727 TSHZ2Q9NRE2 1034 aa10.98□□□□□ -0.65
RNU1-87P-201ENST00000363727 HAX1O00165 279 aa10.95□□□□□ -0.66
RNU1-87P-201ENST00000363727 GTPBP6O43824 516 aaPredicted RBP10.94□□□□□ -0.66
RNU1-87P-201ENST00000363727 VSIG10Q8N0Z9 540 aa10.91□□□□□ -0.66
RNU1-87P-201ENST00000363727 MS4A3Q96HJ5 214 aa10.91□□□□□ -0.66
RNU1-87P-201ENST00000363727 CABP2Q9NPB3 220 aa10.89□□□□□ -0.67
RNU1-87P-201ENST00000363727 TRPC6Q9Y210 931 aa10.89□□□□□ -0.67
RNU1-87P-201ENST00000363727 KDM2AQ9Y2K7 1162 aa10.89□□□□□ -0.67
RNU1-87P-201ENST00000363727 EVX2Q03828 476 aa10.88□□□□□ -0.67
RNU1-87P-201ENST00000363727 EFCAB3Q8N7B9 438 aa10.86□□□□□ -0.67
RNU1-87P-201ENST00000363727 TMEM106CQ9BVX2 250 aa10.85□□□□□ -0.67
RNU1-87P-201ENST00000363727 RYDENQ9NUL5 291 aaKnown RBP10.84□□□□□ -0.67
RNU1-87P-201ENST00000363727 MFRPQ9BY79 579 aa10.82□□□□□ -0.68
RNU1-87P-201ENST00000363727 GALR2O43603 387 aaPredicted RBP10.81□□□□□ -0.68
RNU1-87P-201ENST00000363727 GOLGA2Q08379 1002 aa10.8□□□□□ -0.68
RNU1-87P-201ENST00000363727 PHF8Q9UPP1 1060 aa10.79□□□□□ -0.68
RNU1-87P-201ENST00000363727 POTEHQ6S545 545 aa10.76□□□□□ -0.69
RNU1-87P-201ENST00000363727 SOX12O15370 315 aa10.75□□□□□ -0.69
RNU1-87P-201ENST00000363727 NLRP6P59044 892 aa10.75□□□□□ -0.69
RNU1-87P-201ENST00000363727 BMP2KQ9NSY1 1161 aaPredicted RBP10.75□□□□□ -0.69
RNU1-87P-201ENST00000363727 TTLL13PA6NNM8 815 aa10.74□□□□□ -0.69
RNU1-87P-201ENST00000363727 TIE1P35590 1138 aa10.74□□□□□ -0.69
RNU1-87P-201ENST00000363727 FBXO22Q8NEZ5 403 aa10.74□□□□□ -0.69
RNU1-87P-201ENST00000363727 PPP1R37O75864 691 aa10.73□□□□□ -0.69
RNU1-87P-201ENST00000363727 MKRN3Q13064 507 aaKnown RBP10.73□□□□□ -0.69
RNU1-87P-201ENST00000363727 CADPS2Q86UW7 1296 aa10.69□□□□□ -0.7
RNU1-87P-201ENST00000363727 TRIM35Q9UPQ4 493 aa10.69□□□□□ -0.7
RNU1-87P-201ENST00000363727 MS4A4AQ96JQ5 239 aa10.68□□□□□ -0.7
RNU1-87P-201ENST00000363727 CLCN6P51797 869 aa10.66□□□□□ -0.7
RNU1-87P-201ENST00000363727 GABBR2O75899 941 aa10.65□□□□□ -0.7
RNU1-87P-201ENST00000363727 ATN1P54259 1190 aaPredicted RBP10.65□□□□□ -0.7
RNU1-87P-201ENST00000363727 BCANQ96GW7 911 aa10.65□□□□□ -0.7
RNU1-87P-201ENST00000363727 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.65□□□□□ -0.7
RNU1-87P-201ENST00000363727 ATMINO43313 823 aaPredicted RBP10.62□□□□□ -0.71
RNU1-87P-201ENST00000363727 ASTLQ6HA08 431 aaPredicted RBP10.58□□□□□ -0.72
RNU1-87P-201ENST00000363727 DCBLD2Q96PD2 775 aa10.58□□□□□ -0.72
RNU1-87P-201ENST00000363727 WDR70Q9NW82 654 aa10.58□□□□□ -0.72
RNU1-87P-201ENST00000363727 DPY19L2Q6NUT2 758 aa10.57□□□□□ -0.72
RNU1-87P-201ENST00000363727 ILDR1Q86SU0 546 aaPredicted RBP10.53□□□□□ -0.72
RNU1-87P-201ENST00000363727 NBR1Q14596 966 aa10.52□□□□□ -0.73
RNU1-87P-201ENST00000363727 PELP1Q8IZL8 1130 aaKnown RBP10.52□□□□□ -0.73
RNU1-87P-201ENST00000363727 PDCD7Q8N8D1 485 aaKnown RBP10.51□□□□□ -0.73
RNU1-87P-201ENST00000363727 IRX5P78411 483 aaPredicted RBP10.5□□□□□ -0.73
RNU1-87P-201ENST00000363727 OCEL1Q9H607 264 aa10.5□□□□□ -0.73
RNU1-87P-201ENST00000363727 NCKAP5LQ9HCH0 1330 aa10.5□□□□□ -0.73
RNU1-87P-201ENST00000363727 PLCG2P16885 1265 aa10.49□□□□□ -0.73
RNU1-87P-201ENST00000363727 IER5LQ5T953 404 aa10.49□□□□□ -0.73
RNU1-87P-201ENST00000363727 LARP6Q9BRS8 491 aaKnown RBP10.49□□□□□ -0.73
RNU1-87P-201ENST00000363727 SP7Q8TDD2 431 aaPredicted RBP10.48□□□□□ -0.73
RNU1-87P-201ENST00000363727 SEC24BO95487 1268 aa10.47□□□□□ -0.73
RNU1-87P-201ENST00000363727 KCNV2Q8TDN2 545 aa10.47□□□□□ -0.73
RNU1-87P-201ENST00000363727 PDE4AP27815 886 aa10.46□□□□□ -0.73
RNU1-87P-201ENST00000363727 MICALL2Q8IY33 904 aa10.46□□□□□ -0.73
RNU1-87P-201ENST00000363727 P3H3Q8IVL6 736 aa10.45□□□□□ -0.74
RNU1-87P-201ENST00000363727 COLQQ9Y215 455 aaPredicted RBP10.45□□□□□ -0.74
RNU1-87P-201ENST00000363727 G3V3G9 751 aa10.44□□□□□ -0.74
RNU1-87P-201ENST00000363727 CRISPLD2Q9H0B8 497 aa10.44□□□□□ -0.74
RNU1-87P-201ENST00000363727 POTEIP0CG38 1075 aa10.43□□□□□ -0.74
RNU1-87P-201ENST00000363727 BOLA1Q9Y3E2 137 aa10.43□□□□□ -0.74
RNU1-87P-201ENST00000363727 SLC39A7Q92504 469 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms