RNA–Protein interactions for RNA: ENST00000362409.1

RNU6-661P-201, Transcript of RNA, U6 small nuclear 661, pseudogene, humanhuman

BASIC

Gene RNU6-661P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-661P-201ENST00000362409 SPDYE4A6NLX3 237 aa5.36□□□□□ -1.55
RNU6-661P-201ENST00000362409 CSRNP3Q8WYN3 585 aa5.36□□□□□ -1.55
RNU6-661P-201ENST00000362409 SLC39A7Q92504 469 aa5.34□□□□□ -1.55
RNU6-661P-201ENST00000362409 NPM1P06748 294 aaKnown RBP eCLIP5.33□□□□□ -1.56
RNU6-661P-201ENST00000362409 ATN1P54259 1190 aaPredicted RBP5.33□□□□□ -1.56
RNU6-661P-201ENST00000362409 FAM163AQ96GL9 167 aaPredicted RBP5.33□□□□□ -1.56
RNU6-661P-201ENST00000362409 POTEFA5A3E0 1075 aa5.32□□□□□ -1.56
RNU6-661P-201ENST00000362409 C7P10643 843 aa5.32□□□□□ -1.56
RNU6-661P-201ENST00000362409 TRPC6Q9Y210 931 aa5.32□□□□□ -1.56
RNU6-661P-201ENST00000362409 TSPYL2Q9H2G4 693 aaPredicted RBP5.31□□□□□ -1.56
RNU6-661P-201ENST00000362409 PCDH10Q9P2E7 1040 aa5.29□□□□□ -1.56
RNU6-661P-201ENST00000362409 CCDC61Q9Y6R9 512 aa5.29□□□□□ -1.56
RNU6-661P-201ENST00000362409 MAMSTRQ6ZN01 415 aa5.28□□□□□ -1.56
RNU6-661P-201ENST00000362409 SCUBE2Q9NQ36 999 aa5.28□□□□□ -1.56
RNU6-661P-201ENST00000362409 BMP2KQ9NSY1 1161 aaPredicted RBP5.28□□□□□ -1.56
RNU6-661P-201ENST00000362409 KIF12Q96FN5 646 aa5.26□□□□□ -1.57
RNU6-661P-201ENST00000362409 COLQQ9Y215 455 aaPredicted RBP5.25□□□□□ -1.57
RNU6-661P-201ENST00000362409 MAP3K13O43283 966 aa5.23□□□□□ -1.57
RNU6-661P-201ENST00000362409 CDAN1Q8IWY9 1227 aa5.22□□□□□ -1.57
RNU6-661P-201ENST00000362409 RASEFQ8IZ41 740 aa5.22□□□□□ -1.57
RNU6-661P-201ENST00000362409 TTLL13PA6NNM8 815 aa5.2□□□□□ -1.58
RNU6-661P-201ENST00000362409 TIE1P35590 1138 aa5.2□□□□□ -1.58
RNU6-661P-201ENST00000362409 EHMT2Q96KQ7 1210 aa5.19□□□□□ -1.58
RNU6-661P-201ENST00000362409 SEC24BO95487 1268 aa5.18□□□□□ -1.58
RNU6-661P-201ENST00000362409 PROM2Q8N271 834 aa5.18□□□□□ -1.58
RNU6-661P-201ENST00000362409 ST18O60284 1047 aa5.17□□□□□ -1.58
RNU6-661P-201ENST00000362409 TRIM35Q9UPQ4 493 aa5.17□□□□□ -1.58
RNU6-661P-201ENST00000362409 SLAIN1Q8ND83 568 aa5.15□□□□□ -1.59
RNU6-661P-201ENST00000362409 MIER1Q8N108 512 aa5.13□□□□□ -1.59
RNU6-661P-201ENST00000362409 PCDHB13Q9Y5F0 798 aa5.13□□□□□ -1.59
RNU6-661P-201ENST00000362409 IFNL1Q8IU54 200 aa5.12□□□□□ -1.59
RNU6-661P-201ENST00000362409 MMRN1Q13201 1228 aa5.11□□□□□ -1.59
RNU6-661P-201ENST00000362409 IER5LQ5T953 404 aa5.11□□□□□ -1.59
RNU6-661P-201ENST00000362409 SPNS2Q8IVW8 549 aa5.1□□□□□ -1.59
RNU6-661P-201ENST00000362409 TMEM106CQ9BVX2 250 aa5.1□□□□□ -1.59
RNU6-661P-201ENST00000362409 MARVELD3Q96A59 401 aa5.09□□□□□ -1.59
RNU6-661P-201ENST00000362409 PLCG2P16885 1265 aa5.08□□□□□ -1.6
RNU6-661P-201ENST00000362409 NUBP1P53384 320 aa5.08□□□□□ -1.6
RNU6-661P-201ENST00000362409 IRX5P78411 483 aaPredicted RBP5.08□□□□□ -1.6
RNU6-661P-201ENST00000362409 PLEKHG5O94827 1062 aa5.07□□□□□ -1.6
RNU6-661P-201ENST00000362409 PLCD3Q8N3E9 789 aa5.07□□□□□ -1.6
RNU6-661P-201ENST00000362409 SGIP1Q9BQI5 828 aa5.07□□□□□ -1.6
RNU6-661P-201ENST00000362409 POTEB3A0JP26 581 aa5.02□□□□□ -1.61
RNU6-661P-201ENST00000362409 POTEBQ6S5H4 581 aa5.02□□□□□ -1.61
RNU6-661P-201ENST00000362409 TMEM121BQ9BXQ6 578 aaPredicted RBP5.02□□□□□ -1.61
RNU6-661P-201ENST00000362409 PYGBP11216 843 aa5.01□□□□□ -1.61
RNU6-661P-201ENST00000362409 FAM212AQ96EL1 285 aa5.01□□□□□ -1.61
RNU6-661P-201ENST00000362409 OCEL1Q9H607 264 aa5.01□□□□□ -1.61
RNU6-661P-201ENST00000362409 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.01□□□□□ -1.61
RNU6-661P-201ENST00000362409 PCDHB8Q9UN66 801 aa5.01□□□□□ -1.61
RNU6-661P-201ENST00000362409 KRTAP3-3Q9BYR6 98 aa5□□□□□ -1.61
RNU6-661P-201ENST00000362409 KRTAP3-2Q9BYR7 98 aa5□□□□□ -1.61
RNU6-661P-201ENST00000362409 PDCD7Q8N8D1 485 aaKnown RBP4.99□□□□□ -1.61
RNU6-661P-201ENST00000362409 SNPHO15079 494 aa4.98□□□□□ -1.61
RNU6-661P-201ENST00000362409 EMP3P54852 163 aa4.98□□□□□ -1.61
RNU6-661P-201ENST00000362409 FAM205CA6NFA0 338 aa4.97□□□□□ -1.61
RNU6-661P-201ENST00000362409 HS3ST6Q96QI5 342 aa4.97□□□□□ -1.61
RNU6-661P-201ENST00000362409 ZBTB47Q9UFB7 747 aaPredicted RBP4.97□□□□□ -1.61
RNU6-661P-201ENST00000362409 DCAF8Q5TAQ9 597 aa4.96□□□□□ -1.62
RNU6-661P-201ENST00000362409 C3orf67Q6ZVT6 689 aa4.95□□□□□ -1.62
RNU6-661P-201ENST00000362409 DPY19L2Q6NUT2 758 aa4.91□□□□□ -1.62
RNU6-661P-201ENST00000362409 HOXB3P14651 431 aaPredicted RBP4.9□□□□□ -1.63
RNU6-661P-201ENST00000362409 MKRN3Q13064 507 aaKnown RBP4.9□□□□□ -1.63
RNU6-661P-201ENST00000362409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.9□□□□□ -1.63
RNU6-661P-201ENST00000362409 L3MBTL3Q96JM7 780 aaPredicted RBP4.89□□□□□ -1.63
RNU6-661P-201ENST00000362409 GOLGA2Q08379 1002 aa4.88□□□□□ -1.63
RNU6-661P-201ENST00000362409 FKBP8Q14318 412 aa4.88□□□□□ -1.63
RNU6-661P-201ENST00000362409 PSEN1P49768 467 aa4.86□□□□□ -1.63
RNU6-661P-201ENST00000362409 ZNF467Q7Z7K2 595 aaPredicted RBP4.86□□□□□ -1.63
RNU6-661P-201ENST00000362409 ILDR1Q86SU0 546 aaPredicted RBP4.85□□□□□ -1.63
RNU6-661P-201ENST00000362409 RNF166Q96A37 237 aaPredicted RBP4.85□□□□□ -1.63
RNU6-661P-201ENST00000362409 ERBB3P21860 1342 aa4.84□□□□□ -1.63
RNU6-661P-201ENST00000362409 HOXB1P14653 301 aaPredicted RBP4.84□□□□□ -1.63
RNU6-661P-201ENST00000362409 CABP2Q9NPB3 220 aa4.83□□□□□ -1.64
RNU6-661P-201ENST00000362409 BOLA1Q9Y3E2 137 aa4.83□□□□□ -1.64
RNU6-661P-201ENST00000362409 GSE1Q14687 1217 aa4.82□□□□□ -1.64
RNU6-661P-201ENST00000362409 VARS2Q5ST30 1063 aaKnown RBP4.82□□□□□ -1.64
RNU6-661P-201ENST00000362409 ZNF710Q8N1W2 664 aa4.82□□□□□ -1.64
RNU6-661P-201ENST00000362409 KLHL34Q8N239 644 aa4.81□□□□□ -1.64
RNU6-661P-201ENST00000362409 MYT1LQ9UL68 1186 aa4.81□□□□□ -1.64
RNU6-661P-201ENST00000362409 CHRM1P11229 460 aaPredicted RBP4.8□□□□□ -1.64
RNU6-661P-201ENST00000362409 PDAP1Q13442 181 aaKnown RBP4.8□□□□□ -1.64
RNU6-661P-201ENST00000362409 G3V3G9 751 aa4.79□□□□□ -1.64
RNU6-661P-201ENST00000362409 VASPP50552 380 aaPredicted RBP4.79□□□□□ -1.64
RNU6-661P-201ENST00000362409 DOK7Q18PE1 504 aa4.79□□□□□ -1.64
RNU6-661P-201ENST00000362409 TMEM92Q6UXU6 159 aa4.79□□□□□ -1.64
RNU6-661P-201ENST00000362409 FBXO3Q9UK99 471 aa4.76□□□□□ -1.65
RNU6-661P-201ENST00000362409 ZNF687Q8N1G0 1237 aa4.75□□□□□ -1.65
RNU6-661P-201ENST00000362409 EFCAB3Q8N7B9 438 aa4.75□□□□□ -1.65
RNU6-661P-201ENST00000362409 GPR153Q6NV75 609 aa4.74□□□□□ -1.65
RNU6-661P-201ENST00000362409 ANKRD13DQ6ZTN6 518 aa4.74□□□□□ -1.65
RNU6-661P-201ENST00000362409 MICALL2Q8IY33 904 aa4.73□□□□□ -1.65
RNU6-661P-201ENST00000362409 KHSRPQ92945 711 aaKnown RBP eCLIP4.73□□□□□ -1.653e-7■■□□□ 13.1
RNU6-661P-201ENST00000362409 CIZ1Q9ULV3 898 aaPredicted RBP4.73□□□□□ -1.65
RNU6-661P-201ENST00000362409 RIMBP2O15034 1052 aa4.72□□□□□ -1.65
RNU6-661P-201ENST00000362409 ARSIQ5FYB1 569 aa4.72□□□□□ -1.65
RNU6-661P-201ENST00000362409 IFNLR1Q8IU57 520 aaPredicted RBP4.7□□□□□ -1.66
RNU6-661P-201ENST00000362409 MS4A4AQ96JQ5 239 aa4.7□□□□□ -1.66
RNU6-661P-201ENST00000362409 ZSWIM6Q9HCJ5 1215 aa4.7□□□□□ -1.66
RNU6-661P-201ENST00000362409 ZNF316A6NFI3 1004 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms