RNA–Protein interactions for RNA: ENST00000362003.9

PCGF3-201, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCGF3, Length 5,685 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-201ENST00000362003 UPF2Q9HAU5 1272 aaKnown RBP23.11■■□□□ 1.29
PCGF3-201ENST00000362003 TNIKQ9UKE5 1360 aa23.1■■□□□ 1.29
PCGF3-201ENST00000362003 KCNH8Q96L42 1107 aa23.09■■□□□ 1.29
PCGF3-201ENST00000362003 ERCC6Q03468 1493 aa23.09■■□□□ 1.29
PCGF3-201ENST00000362003 SALL2Q9Y467 1007 aaPredicted RBP23.08■■□□□ 1.29
PCGF3-201ENST00000362003 MRS2Q9HD23 443 aa23.07■■□□□ 1.28
PCGF3-201ENST00000362003 EIF4G2P78344 907 aaKnown RBP eCLIP23.07■■□□□ 1.283e-6■■■■■ 28.1
PCGF3-201ENST00000362003 HSP90AA1P07900 732 aaKnown RBP23.02■■□□□ 1.28
PCGF3-201ENST00000362003 PPP1R15AO75807 674 aaPredicted RBP22.99■■□□□ 1.27
PCGF3-201ENST00000362003 CFDP1Q9UEE9 299 aaPredicted RBP22.98■■□□□ 1.27
PCGF3-201ENST00000362003 CCDC136Q96JN2 1154 aa22.97■■□□□ 1.27
PCGF3-201ENST00000362003 ANP32BQ92688 251 aaKnown RBP22.93■■□□□ 1.26
PCGF3-201ENST00000362003 SCAF1Q9H7N4 1312 aaKnown RBP22.91■■□□□ 1.26
PCGF3-201ENST00000362003 HIRIP3Q9BW71 556 aaPredicted RBP22.9■■□□□ 1.26
PCGF3-201ENST00000362003 CECR2Q9BXF3 1484 aa22.89■■□□□ 1.26
PCGF3-201ENST00000362003 EIF4G1Q04637 1599 aaKnown RBP22.88■■□□□ 1.25
PCGF3-201ENST00000362003 FHAD1B1AJZ9 1412 aa22.87■■□□□ 1.25
PCGF3-201ENST00000362003 MIER1Q8N108 512 aa22.87■■□□□ 1.25
PCGF3-201ENST00000362003 CDCA8Q53HL2 280 aa22.86■■□□□ 1.25
PCGF3-201ENST00000362003 MYH16Q9H6N6 1097 aa22.86■■□□□ 1.25
PCGF3-201ENST00000362003 RGL3Q3MIN7 710 aa22.84■■□□□ 1.25
PCGF3-201ENST00000362003 CUX2O14529 1486 aa22.82■■□□□ 1.24
PCGF3-201ENST00000362003 CCNB3Q8WWL7 1395 aa22.8■■□□□ 1.24
PCGF3-201ENST00000362003 ARID4BQ4LE39 1312 aaPredicted RBP22.8■■□□□ 1.24
PCGF3-201ENST00000362003 ZBTB7CA1YPR0 619 aa22.8■■□□□ 1.24
PCGF3-201ENST00000362003 SMARCA2P51531 1590 aa22.79■■□□□ 1.24
PCGF3-201ENST00000362003 C14orf37Q86TY3 774 aa22.79■■□□□ 1.24
PCGF3-201ENST00000362003 CFAP53Q96M91 514 aa22.79■■□□□ 1.24
PCGF3-201ENST00000362003 CARMIL1Q5VZK9 1371 aa22.79■■□□□ 1.24
PCGF3-201ENST00000362003 SENP3Q9H4L4 574 aaPredicted RBP22.78■■□□□ 1.24
PCGF3-201ENST00000362003 CARD11Q9BXL7 1154 aa22.76■■□□□ 1.23
PCGF3-201ENST00000362003 KNSTRNQ9Y448 316 aa22.75■■□□□ 1.23
PCGF3-201ENST00000362003 CCDC88BA6NC98 1476 aa22.7■■□□□ 1.23
PCGF3-201ENST00000362003 IRX6P78412 446 aaPredicted RBP22.69■■□□□ 1.22
PCGF3-201ENST00000362003 MROH2BQ7Z745 1585 aa22.69■■□□□ 1.22
PCGF3-201ENST00000362003 SOGA1O94964 1423 aa22.68■■□□□ 1.22
PCGF3-201ENST00000362003 KANK1Q14678 1352 aa22.66■■□□□ 1.22
PCGF3-201ENST00000362003 A0A0G2JS52 829 aa22.65■■□□□ 1.22
PCGF3-201ENST00000362003 ARHGAP35Q9NRY4 1499 aa22.63■■□□□ 1.21
PCGF3-201ENST00000362003 PLEKHG5O94827 1062 aa22.62■■□□□ 1.21
PCGF3-201ENST00000362003 ABCC8Q09428 1581 aa22.61■■□□□ 1.21
PCGF3-201ENST00000362003 PDS5BQ9NTI5 1447 aa22.61■■□□□ 1.21
PCGF3-201ENST00000362003 POGKQ9P215 609 aa22.6■■□□□ 1.21
PCGF3-201ENST00000362003 TOP2AP11388 1531 aaKnown RBP22.59■■□□□ 1.21
PCGF3-201ENST00000362003 HAP1P54257 671 aaPredicted RBP22.58■■□□□ 1.21
PCGF3-201ENST00000362003 SIN3AQ96ST3 1273 aa22.58■■□□□ 1.21
PCGF3-201ENST00000362003 DDRGK1Q96HY6 314 aa22.57■■□□□ 1.2
PCGF3-201ENST00000362003 MAPK8IP3Q9UPT6 1336 aa22.56■■□□□ 1.2
PCGF3-201ENST00000362003 CARMIL2Q6F5E8 1435 aa22.56■■□□□ 1.2
PCGF3-201ENST00000362003 VPS8Q8N3P4 1428 aa22.55■■□□□ 1.2
PCGF3-201ENST00000362003 PPM1GO15355 546 aaPredicted RBP22.55■■□□□ 1.2
PCGF3-201ENST00000362003 NUDCQ9Y266 331 aa22.55■■□□□ 1.2
PCGF3-201ENST00000362003 BECN1Q14457 450 aa22.54■■□□□ 1.2
PCGF3-201ENST00000362003 NBR1Q14596 966 aa22.53■■□□□ 1.2
PCGF3-201ENST00000362003 SETD5Q9C0A6 1442 aa22.51■■□□□ 1.19
PCGF3-201ENST00000362003 FTSJ3Q8IY81 847 aaKnown RBP22.5■■□□□ 1.19
PCGF3-201ENST00000362003 TMF1P82094 1093 aa22.48■■□□□ 1.19
PCGF3-201ENST00000362003 WIZO95785 1651 aa22.48■■□□□ 1.19
PCGF3-201ENST00000362003 TIMELESSQ9UNS1 1208 aa22.47■■□□□ 1.19
PCGF3-201ENST00000362003 EIF5BO60841 1220 aaKnown RBP22.46■■□□□ 1.19
PCGF3-201ENST00000362003 CASC1Q6TDU7 716 aa22.46■■□□□ 1.19
PCGF3-201ENST00000362003 FMN1Q68DA7 1419 aa22.45■■□□□ 1.19
PCGF3-201ENST00000362003 DCAF11Q8TEB1 546 aa22.45■■□□□ 1.18
PCGF3-201ENST00000362003 HDGFP51858 240 aaKnown RBP22.44■■□□□ 1.18
PCGF3-201ENST00000362003 PNNQ9H307 717 aaKnown RBP22.44■■□□□ 1.18
PCGF3-201ENST00000362003 CC2D1BQ5T0F9 858 aaKnown RBP22.44■■□□□ 1.18
PCGF3-201ENST00000362003 LAS1LQ9Y4W2 734 aaKnown RBP22.43■■□□□ 1.18
PCGF3-201ENST00000362003 NEUROD2Q15784 382 aa22.4■■□□□ 1.18
PCGF3-201ENST00000362003 NCLP19338 710 aaKnown RBP22.4■■□□□ 1.18
PCGF3-201ENST00000362003 SUPT16HQ9Y5B9 1047 aaKnown RBP22.4■■□□□ 1.18
PCGF3-201ENST00000362003 ARXQ96QS3 562 aa22.38■■□□□ 1.17
PCGF3-201ENST00000362003 CHMP4BQ9H444 224 aaKnown RBP22.38■■□□□ 1.17
PCGF3-201ENST00000362003 SENP3-EIF4A1A0A087X0R7 540 aa22.37■■□□□ 1.17
PCGF3-201ENST00000362003 TNNT2P45379 298 aaPredicted RBP22.36■■□□□ 1.17
PCGF3-201ENST00000362003 MS4A1P11836 297 aa22.35■■□□□ 1.17
PCGF3-201ENST00000362003 LMOD2Q6P5Q4 547 aa22.35■■□□□ 1.17
PCGF3-201ENST00000362003 GOLGA6L22H0YM25 854 aa22.35■■□□□ 1.17
PCGF3-201ENST00000362003 TDRD9Q8NDG6 1382 aaKnown RBP22.33■■□□□ 1.17
PCGF3-201ENST00000362003 U2SURPO15042 1029 aaKnown RBP22.33■■□□□ 1.16
PCGF3-201ENST00000362003 ANP32EQ9BTT0 268 aa22.32■■□□□ 1.16
PCGF3-201ENST00000362003 RAPGEF2Q9Y4G8 1499 aa22.32■■□□□ 1.16
PCGF3-201ENST00000362003 PPP4R2Q9NY27 417 aa22.31■■□□□ 1.16
PCGF3-201ENST00000362003 PKD2Q13563 968 aa22.3■■□□□ 1.16
PCGF3-201ENST00000362003 MLECQ14165 292 aa22.3■■□□□ 1.16
PCGF3-201ENST00000362003 SRPK2P78362 688 aaKnown RBP22.29■■□□□ 1.16
PCGF3-201ENST00000362003 KANK4Q5T7N3 995 aaPredicted RBP22.29■■□□□ 1.16
PCGF3-201ENST00000362003 ANKRD30AQ9BXX3 1397 aa22.29■■□□□ 1.16
PCGF3-201ENST00000362003 SMARCA4P51532 1647 aa22.29■■□□□ 1.16
PCGF3-201ENST00000362003 CADPSQ9ULU8 1353 aa22.29■■□□□ 1.16
PCGF3-201ENST00000362003 FRAT1Q92837 279 aaPredicted RBP22.28■■□□□ 1.16
PCGF3-201ENST00000362003 TRHP20396 242 aaPredicted RBP22.28■■□□□ 1.16
PCGF3-201ENST00000362003 HSPA5P11021 654 aaKnown RBP22.27■■□□□ 1.16
PCGF3-201ENST00000362003 MORC1Q86VD1 984 aa22.26■■□□□ 1.15
PCGF3-201ENST00000362003 CDK11BP21127 795 aaKnown RBP22.25■■□□□ 1.15
PCGF3-201ENST00000362003 CCER2I3L3R5 266 aa22.24■■□□□ 1.15
PCGF3-201ENST00000362003 EFCAB2Q5VUJ9 269 aa22.24■■□□□ 1.15
PCGF3-201ENST00000362003 GGT6Q6P531 493 aa22.24■■□□□ 1.15
PCGF3-201ENST00000362003 KTN1Q86UP2 1357 aaKnown RBP22.23■■□□□ 1.15
PCGF3-201ENST00000362003 RAB3GAP2Q9H2M9 1393 aa22.22■■□□□ 1.15
PCGF3-201ENST00000362003 ROCK2O75116 1388 aaKnown RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms