RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 FBLN2P98095 1184 aa23.99■■□□□ 1.43
SMG5-201ENST00000361813 CCDC88BA6NC98 1476 aa23.99■■□□□ 1.43
SMG5-201ENST00000361813 B4GALNT3Q6L9W6 998 aa23.99■■□□□ 1.43
SMG5-201ENST00000361813 CCNB3Q8WWL7 1395 aa23.96■■□□□ 1.43
SMG5-201ENST00000361813 KANK4Q5T7N3 995 aaPredicted RBP23.94■■□□□ 1.42
SMG5-201ENST00000361813 ABCC8Q09428 1581 aa23.94■■□□□ 1.42
SMG5-201ENST00000361813 VPS8Q8N3P4 1428 aa23.93■■□□□ 1.42
SMG5-201ENST00000361813 MROH2BQ7Z745 1585 aa23.91■■□□□ 1.42
SMG5-201ENST00000361813 KDM2AQ9Y2K7 1162 aa23.91■■□□□ 1.42
SMG5-201ENST00000361813 KCNH8Q96L42 1107 aa23.9■■□□□ 1.42
SMG5-201ENST00000361813 NOP58Q9Y2X3 529 aaKnown RBP23.89■■□□□ 1.41
SMG5-201ENST00000361813 CCER2I3L3R5 266 aa23.88■■□□□ 1.41
SMG5-201ENST00000361813 ARXQ96QS3 562 aa23.87■■□□□ 1.41
SMG5-201ENST00000361813 RTN4Q9NQC3 1192 aaKnown RBP23.84■■□□□ 1.41
SMG5-201ENST00000361813 DEKP35659 375 aaKnown RBP23.83■■□□□ 1.41
SMG5-201ENST00000361813 BAZ1AQ9NRL2 1556 aaPredicted RBP23.82■■□□□ 1.4
SMG5-201ENST00000361813 LAS1LQ9Y4W2 734 aaKnown RBP23.8■■□□□ 1.4
SMG5-201ENST00000361813 UPF2Q9HAU5 1272 aaKnown RBP23.78■■□□□ 1.4
SMG5-201ENST00000361813 KIF27Q86VH2 1401 aa23.78■■□□□ 1.4
SMG5-201ENST00000361813 TIMELESSQ9UNS1 1208 aa23.76■■□□□ 1.39
SMG5-201ENST00000361813 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.73■■□□□ 1.39
SMG5-201ENST00000361813 NACADO15069 1562 aa23.73■■□□□ 1.39
SMG5-201ENST00000361813 NEFMP07197 916 aa23.72■■□□□ 1.39
SMG5-201ENST00000361813 RAB3GAP2Q9H2M9 1393 aa23.72■■□□□ 1.39
SMG5-201ENST00000361813 SETD5Q9C0A6 1442 aa23.71■■□□□ 1.39
SMG5-201ENST00000361813 WDR43Q15061 677 aaKnown RBP eCLIP23.71■■□□□ 1.39
SMG5-201ENST00000361813 DDRGK1Q96HY6 314 aa23.69■■□□□ 1.38
SMG5-201ENST00000361813 HSP90AA1P07900 732 aaKnown RBP23.68■■□□□ 1.38
SMG5-201ENST00000361813 DHX57Q6P158 1386 aaKnown RBP23.67■■□□□ 1.38
SMG5-201ENST00000361813 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.66■■□□□ 1.382e-6■■□□□ 11.6
SMG5-201ENST00000361813 PPM1GO15355 546 aaPredicted RBP23.65■■□□□ 1.38
SMG5-201ENST00000361813 BAZ1BQ9UIG0 1483 aaKnown RBP23.63■■□□□ 1.37
SMG5-201ENST00000361813 HSPA5P11021 654 aaKnown RBP23.63■■□□□ 1.37
SMG5-201ENST00000361813 PPP1R15AO75807 674 aaPredicted RBP23.63■■□□□ 1.37
SMG5-201ENST00000361813 RUSC2Q8N2Y8 1516 aa23.61■■□□□ 1.37
SMG5-201ENST00000361813 GLIPR1L2Q4G1C9 344 aa23.6■■□□□ 1.37
SMG5-201ENST00000361813 TSPY4P0CV99 314 aa23.6■■□□□ 1.37
SMG5-201ENST00000361813 TSPY10P0CW01 314 aa23.6■■□□□ 1.37
SMG5-201ENST00000361813 ANP32BQ92688 251 aaKnown RBP23.59■■□□□ 1.37
SMG5-201ENST00000361813 WIZO95785 1651 aa23.59■■□□□ 1.37
SMG5-201ENST00000361813 CARD11Q9BXL7 1154 aa23.55■■□□□ 1.36
SMG5-201ENST00000361813 ERICH6BQ5W0A0 696 aa23.54■■□□□ 1.36
SMG5-201ENST00000361813 RGL3Q3MIN7 710 aa23.54■■□□□ 1.36
SMG5-201ENST00000361813 RGS3P49796 1198 aa23.5■■□□□ 1.35
SMG5-201ENST00000361813 CHGAP10645 457 aaKnown RBP23.48■■□□□ 1.35
SMG5-201ENST00000361813 FHAD1B1AJZ9 1412 aa23.48■■□□□ 1.35
SMG5-201ENST00000361813 RAPGEF2Q9Y4G8 1499 aa23.47■■□□□ 1.35
SMG5-201ENST00000361813 BECN1Q14457 450 aa23.47■■□□□ 1.35
SMG5-201ENST00000361813 FOXD1Q16676 465 aa23.46■■□□□ 1.35
SMG5-201ENST00000361813 CARMIL1Q5VZK9 1371 aa23.45■■□□□ 1.35
SMG5-201ENST00000361813 CFDP1Q9UEE9 299 aaPredicted RBP23.39■■□□□ 1.33
SMG5-201ENST00000361813 SLC24A1O60721 1099 aa23.38■■□□□ 1.33
SMG5-201ENST00000361813 CUX2O14529 1486 aa23.38■■□□□ 1.33
SMG5-201ENST00000361813 CC2D1BQ5T0F9 858 aaKnown RBP23.36■■□□□ 1.33
SMG5-201ENST00000361813 IPO9Q96P70 1041 aaKnown RBP23.36■■□□□ 1.33
SMG5-201ENST00000361813 ARHGAP35Q9NRY4 1499 aa23.35■■□□□ 1.33
SMG5-201ENST00000361813 TOP2AP11388 1531 aaKnown RBP23.33■■□□□ 1.33
SMG5-201ENST00000361813 KNSTRNQ9Y448 316 aa23.33■■□□□ 1.33
SMG5-201ENST00000361813 FANCIQ9NVI1 1328 aa23.3■■□□□ 1.32
SMG5-201ENST00000361813 TRIM44Q96DX7 344 aaPredicted RBP23.29■■□□□ 1.32
SMG5-201ENST00000361813 L3MBTL2Q969R5 705 aa23.29■■□□□ 1.32
SMG5-201ENST00000361813 NUDCQ9Y266 331 aa23.28■■□□□ 1.32
SMG5-201ENST00000361813 NEUROD2Q15784 382 aa23.27■■□□□ 1.32
SMG5-201ENST00000361813 MPHOSPH9Q99550 1183 aa23.27■■□□□ 1.32
SMG5-201ENST00000361813 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.27■■□□□ 1.32
SMG5-201ENST00000361813 RCAN3Q9UKA8 241 aa23.27■■□□□ 1.32
SMG5-201ENST00000361813 DCAF11Q8TEB1 546 aa23.26■■□□□ 1.31
SMG5-201ENST00000361813 TCERG1O14776 1098 aaKnown RBP23.25■■□□□ 1.31
SMG5-201ENST00000361813 PLEKHD1A6NEE1 506 aa23.23■■□□□ 1.31
SMG5-201ENST00000361813 FRAT1Q92837 279 aaPredicted RBP23.23■■□□□ 1.31
SMG5-201ENST00000361813 NAP1L5Q96NT1 182 aaPredicted RBP23.23■■□□□ 1.31
SMG5-201ENST00000361813 CHMP7Q8WUX9 453 aaPredicted RBP23.2■■□□□ 1.3
SMG5-201ENST00000361813 PRKRIP1Q9H875 184 aaPredicted RBP23.19■■□□□ 1.3
SMG5-201ENST00000361813 PKD2Q13563 968 aa23.15■■□□□ 1.3
SMG5-201ENST00000361813 FMN1Q68DA7 1419 aa23.14■■□□□ 1.29
SMG5-201ENST00000361813 CDCA8Q53HL2 280 aa23.13■■□□□ 1.29
SMG5-201ENST00000361813 FTSJ3Q8IY81 847 aaKnown RBP23.11■■□□□ 1.29
SMG5-201ENST00000361813 NCLP19338 710 aaKnown RBP23.1■■□□□ 1.29
SMG5-201ENST00000361813 SENP3Q9H4L4 574 aaPredicted RBP23.1■■□□□ 1.29
SMG5-201ENST00000361813 ZBED9Q6R2W3 1325 aa23.1■■□□□ 1.29
SMG5-201ENST00000361813 GOLGA6L22H0YM25 854 aa23.09■■□□□ 1.29
SMG5-201ENST00000361813 SPRYD3Q8NCJ5 442 aa23.09■■□□□ 1.29
SMG5-201ENST00000361813 FHOD3Q2V2M9 1422 aa23.08■■□□□ 1.29
SMG5-201ENST00000361813 TNNT2P45379 298 aaPredicted RBP23.08■■□□□ 1.29
SMG5-201ENST00000361813 MYH16Q9H6N6 1097 aa23.06■■□□□ 1.28
SMG5-201ENST00000361813 TMF1P82094 1093 aa23.06■■□□□ 1.28
SMG5-201ENST00000361813 SLKQ9H2G2 1235 aaPredicted RBP23.06■■□□□ 1.28
SMG5-201ENST00000361813 KTN1Q86UP2 1357 aaKnown RBP23.05■■□□□ 1.28
SMG5-201ENST00000361813 RALBP1Q15311 655 aa23.05■■□□□ 1.28
SMG5-201ENST00000361813 PDE4AP27815 886 aa23.04■■□□□ 1.28
SMG5-201ENST00000361813 EXOC6Q8TAG9 804 aa23.02■■□□□ 1.28
SMG5-201ENST00000361813 CFAP53Q96M91 514 aa23.02■■□□□ 1.28
SMG5-201ENST00000361813 SLC4A3P48751 1232 aa23.02■■□□□ 1.28
SMG5-201ENST00000361813 KIF21BO75037 1637 aa23.01■■□□□ 1.27
SMG5-201ENST00000361813 STAG3Q9UJ98 1225 aa23■■□□□ 1.27
SMG5-201ENST00000361813 L1TD1Q5T7N2 865 aaKnown RBP22.99■■□□□ 1.27
SMG5-201ENST00000361813 EIF4G1Q04637 1599 aaKnown RBP22.98■■□□□ 1.27
SMG5-201ENST00000361813 USP35Q9P2H5 1018 aa22.97■■□□□ 1.27
SMG5-201ENST00000361813 GZF1Q9H116 711 aaPredicted RBP22.97■■□□□ 1.27
SMG5-201ENST00000361813 PLIN1O60240 522 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms