RNA–Protein interactions for RNA: ENST00000361796.9

CTNND1-204, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-204ENST00000361796 NCBP3Q53F19 620 aaKnown RBP10.76□□□□□ -0.69
CTNND1-204ENST00000361796 RRP7BPQ9NSQ0 103 aa10.74□□□□□ -0.69
CTNND1-204ENST00000361796 TRHP20396 242 aaPredicted RBP10.72□□□□□ -0.69
CTNND1-204ENST00000361796 AEBP2Q6ZN18 517 aaPredicted RBP10.7□□□□□ -0.7
CTNND1-204ENST00000361796 GLIPR1L2Q4G1C9 344 aa10.69□□□□□ -0.7
CTNND1-204ENST00000361796 MYH16Q9H6N6 1097 aa10.69□□□□□ -0.7
CTNND1-204ENST00000361796 DCAF1Q9Y4B6 1507 aa10.69□□□□□ -0.7
CTNND1-204ENST00000361796 RGL3Q3MIN7 710 aa10.68□□□□□ -0.7
CTNND1-204ENST00000361796 NCLP19338 710 aaKnown RBP10.68□□□□□ -0.7
CTNND1-204ENST00000361796 TAOK2Q9UL54 1235 aa10.67□□□□□ -0.7
CTNND1-204ENST00000361796 MTUS2Q5JR59 1369 aa10.67□□□□□ -0.7
CTNND1-204ENST00000361796 NPHP1O15259 732 aa10.66□□□□□ -0.7
CTNND1-204ENST00000361796 KCNH8Q96L42 1107 aa10.66□□□□□ -0.7
CTNND1-204ENST00000361796 RTN4Q9NQC3 1192 aaKnown RBP10.66□□□□□ -0.7
CTNND1-204ENST00000361796 TSPY4P0CV99 314 aa10.65□□□□□ -0.7
CTNND1-204ENST00000361796 TSPY10P0CW01 314 aa10.65□□□□□ -0.7
CTNND1-204ENST00000361796 PPM1GO15355 546 aaPredicted RBP10.65□□□□□ -0.7
CTNND1-204ENST00000361796 ARID4BQ4LE39 1312 aaPredicted RBP10.65□□□□□ -0.7
CTNND1-204ENST00000361796 EIF4G2P78344 907 aaKnown RBP eCLIP10.64□□□□□ -0.71
CTNND1-204ENST00000361796 SUPT16HQ9Y5B9 1047 aaKnown RBP10.63□□□□□ -0.71
CTNND1-204ENST00000361796 NEUROD2Q15784 382 aa10.63□□□□□ -0.71
CTNND1-204ENST00000361796 LAS1LQ9Y4W2 734 aaKnown RBP10.63□□□□□ -0.71
CTNND1-204ENST00000361796 MYO15BQ96JP2 1530 aa10.62□□□□□ -0.71
CTNND1-204ENST00000361796 PPP1R15AO75807 674 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-204ENST00000361796 TRIM44Q96DX7 344 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-204ENST00000361796 CDK11BP21127 795 aaKnown RBP10.61□□□□□ -0.71
CTNND1-204ENST00000361796 CHMP7Q8WUX9 453 aaPredicted RBP10.6□□□□□ -0.71
CTNND1-204ENST00000361796 TNNT2P45379 298 aaPredicted RBP10.6□□□□□ -0.71
CTNND1-204ENST00000361796 BECN1Q14457 450 aa10.6□□□□□ -0.71
CTNND1-204ENST00000361796 CLIP1P30622 1438 aa10.59□□□□□ -0.71
CTNND1-204ENST00000361796 DDRGK1Q96HY6 314 aa10.59□□□□□ -0.71
CTNND1-204ENST00000361796 RGS3P49796 1198 aa10.57□□□□□ -0.72
CTNND1-204ENST00000361796 PTMAP06454 111 aaKnown RBP10.57□□□□□ -0.72
CTNND1-204ENST00000361796 FTSJ3Q8IY81 847 aaKnown RBP10.56□□□□□ -0.72
CTNND1-204ENST00000361796 ZCCHC6Q5VYS8 1495 aaKnown RBP10.55□□□□□ -0.72
CTNND1-204ENST00000361796 CC2D1BQ5T0F9 858 aaKnown RBP10.55□□□□□ -0.72
CTNND1-204ENST00000361796 FRAT1Q92837 279 aaPredicted RBP10.55□□□□□ -0.72
CTNND1-204ENST00000361796 DNTTIP2Q5QJE6 756 aaKnown RBP10.54□□□□□ -0.72
CTNND1-204ENST00000361796 SIN3AQ96ST3 1273 aa10.54□□□□□ -0.72
CTNND1-204ENST00000361796 PLCB2Q00722 1185 aa10.54□□□□□ -0.72
CTNND1-204ENST00000361796 GOLGA6L22H0YM25 854 aa10.53□□□□□ -0.72
CTNND1-204ENST00000361796 CARD11Q9BXL7 1154 aa10.53□□□□□ -0.72
CTNND1-204ENST00000361796 KNSTRNQ9Y448 316 aa10.53□□□□□ -0.72
CTNND1-204ENST00000361796 ANP32EQ9BTT0 268 aa10.52□□□□□ -0.73
CTNND1-204ENST00000361796 LMOD2Q6P5Q4 547 aa10.52□□□□□ -0.73
CTNND1-204ENST00000361796 NAP1L5Q96NT1 182 aaPredicted RBP10.52□□□□□ -0.73
CTNND1-204ENST00000361796 SPRYD3Q8NCJ5 442 aa10.51□□□□□ -0.73
CTNND1-204ENST00000361796 CEP162Q5TB80 1403 aa10.51□□□□□ -0.73
CTNND1-204ENST00000361796 B4GALNT3Q6L9W6 998 aa10.51□□□□□ -0.73
CTNND1-204ENST00000361796 CFAP53Q96M91 514 aa10.5□□□□□ -0.73
CTNND1-204ENST00000361796 ZRSR1Q15695 479 aaKnown RBP10.5□□□□□ -0.73
CTNND1-204ENST00000361796 CASC1Q6TDU7 716 aa10.49□□□□□ -0.73
CTNND1-204ENST00000361796 NAP1L2Q9ULW6 460 aaPredicted RBP10.48□□□□□ -0.73
CTNND1-204ENST00000361796 KRI1Q8N9T8 703 aaKnown RBP10.48□□□□□ -0.73
CTNND1-204ENST00000361796 SOX12O15370 315 aa10.47□□□□□ -0.73
CTNND1-204ENST00000361796 MAPK8IP3Q9UPT6 1336 aa10.47□□□□□ -0.73
CTNND1-204ENST00000361796 U2SURPO15042 1029 aaKnown RBP10.47□□□□□ -0.73
CTNND1-204ENST00000361796 PHF23Q9BUL5 403 aaPredicted RBP10.47□□□□□ -0.73
CTNND1-204ENST00000361796 PLEKHD1A6NEE1 506 aa10.46□□□□□ -0.73
CTNND1-204ENST00000361796 HSP90AB1P08238 724 aaKnown RBP10.46□□□□□ -0.73
CTNND1-204ENST00000361796 NOP58Q9Y2X3 529 aaKnown RBP10.46□□□□□ -0.73
CTNND1-204ENST00000361796 CFDP1Q9UEE9 299 aaPredicted RBP10.45□□□□□ -0.74
CTNND1-204ENST00000361796 OS9Q13438 667 aaPredicted RBP10.45□□□□□ -0.74
CTNND1-204ENST00000361796 GOLGA3Q08378 1498 aa10.45□□□□□ -0.74
CTNND1-204ENST00000361796 POGKQ9P215 609 aa10.44□□□□□ -0.74
CTNND1-204ENST00000361796 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-204ENST00000361796 AMER1Q5JTC6 1135 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-204ENST00000361796 PPP4R2Q9NY27 417 aa10.43□□□□□ -0.74
CTNND1-204ENST00000361796 RSF1Q96T23 1441 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-204ENST00000361796 SAFB2Q14151 953 aaKnown RBP eCLIP10.42□□□□□ -0.74
CTNND1-204ENST00000361796 CLSTN1O94985 981 aa10.42□□□□□ -0.74
CTNND1-204ENST00000361796 FGD1P98174 961 aa10.41□□□□□ -0.74
CTNND1-204ENST00000361796 KCNJ4P48050 445 aa10.4□□□□□ -0.74
CTNND1-204ENST00000361796 APBB1O00213 710 aa10.39□□□□□ -0.75
CTNND1-204ENST00000361796 CDCA8Q53HL2 280 aa10.39□□□□□ -0.75
CTNND1-204ENST00000361796 DCAF8L1A6NGE4 600 aa10.38□□□□□ -0.75
CTNND1-204ENST00000361796 CCDC180Q9P1Z9 1646 aa10.38□□□□□ -0.75
CTNND1-204ENST00000361796 DCAF11Q8TEB1 546 aa10.38□□□□□ -0.75
CTNND1-204ENST00000361796 ARID3AQ99856 593 aa10.38□□□□□ -0.75
CTNND1-204ENST00000361796 NUDCQ9Y266 331 aa10.38□□□□□ -0.75
CTNND1-204ENST00000361796 CCDC9Q9Y3X0 531 aaKnown RBP10.37□□□□□ -0.75
CTNND1-204ENST00000361796 MLECQ14165 292 aa10.37□□□□□ -0.75
CTNND1-204ENST00000361796 FOXD1Q16676 465 aa10.37□□□□□ -0.75
CTNND1-204ENST00000361796 ERICH6BQ5W0A0 696 aa10.36□□□□□ -0.75
CTNND1-204ENST00000361796 PRM3Q9NNZ6 103 aa10.36□□□□□ -0.75
CTNND1-204ENST00000361796 DEKP35659 375 aaKnown RBP10.35□□□□□ -0.75
CTNND1-204ENST00000361796 HSCBQ8IWL3 235 aa10.35□□□□□ -0.75
CTNND1-204ENST00000361796 ISY1Q9ULR0 285 aaKnown RBP10.34□□□□□ -0.75
CTNND1-204ENST00000361796 EIF4G1Q04637 1599 aaKnown RBP10.34□□□□□ -0.75
CTNND1-204ENST00000361796 SRPK2P78362 688 aaKnown RBP10.34□□□□□ -0.75
CTNND1-204ENST00000361796 WRNQ14191 1432 aaPredicted RBP eCLIP10.33□□□□□ -0.76
CTNND1-204ENST00000361796 GOLGA2Q08379 1002 aa10.33□□□□□ -0.76
CTNND1-204ENST00000361796 GZF1Q9H116 711 aaPredicted RBP10.33□□□□□ -0.76
CTNND1-204ENST00000361796 STK26Q9P289 416 aa10.33□□□□□ -0.76
CTNND1-204ENST00000361796 DRC7Q8IY82 874 aa10.32□□□□□ -0.76
CTNND1-204ENST00000361796 GOLGA6L4A6NEF3 574 aa10.31□□□□□ -0.76
CTNND1-204ENST00000361796 GOLGA6L6A8MZA4 724 aa10.31□□□□□ -0.76
CTNND1-204ENST00000361796 TMF1P82094 1093 aa10.31□□□□□ -0.76
CTNND1-204ENST00000361796 HSPA5P11021 654 aaKnown RBP10.31□□□□□ -0.76
CTNND1-204ENST00000361796 MORC1Q86VD1 984 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms