RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 TMUB1Q9BVT8 246 aa3.8□□□□□ -1.8
SMARCAD1-202ENST00000359052 SSUH2Q9Y2M2 353 aa3.79□□□□□ -1.8
SMARCAD1-202ENST00000359052 ERICH6Q7L0X2 663 aa3.79□□□□□ -1.8
SMARCAD1-202ENST00000359052 ZC3H15Q8WU90 426 aaKnown RBP3.79□□□□□ -1.8
SMARCAD1-202ENST00000359052 CHRM1P11229 460 aaPredicted RBP3.79□□□□□ -1.8
SMARCAD1-202ENST00000359052 FBXO31Q5XUX0 539 aaPredicted RBP3.79□□□□□ -1.8
SMARCAD1-202ENST00000359052 FBXO3Q9UK99 471 aa3.78□□□□□ -1.8
SMARCAD1-202ENST00000359052 NUBP1P53384 320 aa3.77□□□□□ -1.81
SMARCAD1-202ENST00000359052 KCNV2Q8TDN2 545 aa3.77□□□□□ -1.81
SMARCAD1-202ENST00000359052 ZNF219Q9P2Y4 722 aaPredicted RBP3.77□□□□□ -1.81
SMARCAD1-202ENST00000359052 CAMK2BQ13554 666 aa3.76□□□□□ -1.81
SMARCAD1-202ENST00000359052 PEG3Q9GZU2 1588 aa3.76□□□□□ -1.81
SMARCAD1-202ENST00000359052 GPR37L1O60883 481 aa3.76□□□□□ -1.81
SMARCAD1-202ENST00000359052 SHROOM4Q9ULL8 1493 aa3.76□□□□□ -1.81
SMARCAD1-202ENST00000359052 TRAIPQ9BWF2 469 aa3.75□□□□□ -1.81
SMARCAD1-202ENST00000359052 CADPSQ9ULU8 1353 aa3.74□□□□□ -1.81
SMARCAD1-202ENST00000359052 EIF4G1Q04637 1599 aaKnown RBP3.74□□□□□ -1.81
SMARCAD1-202ENST00000359052 SPDYE4A6NLX3 237 aa3.74□□□□□ -1.81
SMARCAD1-202ENST00000359052 PRDM2Q13029 1718 aa3.74□□□□□ -1.81
SMARCAD1-202ENST00000359052 MFSD10Q14728 455 aa3.73□□□□□ -1.81
SMARCAD1-202ENST00000359052 BARGINQ6ZT62 677 aa3.71□□□□□ -1.82
SMARCAD1-202ENST00000359052 GOPCQ9HD26 462 aa3.7□□□□□ -1.82
SMARCAD1-202ENST00000359052 FBXO22Q8NEZ5 403 aa3.7□□□□□ -1.82
SMARCAD1-202ENST00000359052 NCKAP5LQ9HCH0 1330 aa3.7□□□□□ -1.82
SMARCAD1-202ENST00000359052 PAXIP1Q6ZW49 1069 aaPredicted RBP3.69□□□□□ -1.82
SMARCAD1-202ENST00000359052 PODXL2Q9NZ53 605 aa3.69□□□□□ -1.82
SMARCAD1-202ENST00000359052 ZCCHC6Q5VYS8 1495 aaKnown RBP3.69□□□□□ -1.82
SMARCAD1-202ENST00000359052 ZMYND15Q9H091 742 aa3.68□□□□□ -1.82
SMARCAD1-202ENST00000359052 SOCS7O14512 581 aa3.68□□□□□ -1.82
SMARCAD1-202ENST00000359052 A6NJR5 290 aa3.67□□□□□ -1.82
SMARCAD1-202ENST00000359052 SPRYD3Q8NCJ5 442 aa3.67□□□□□ -1.82
SMARCAD1-202ENST00000359052 IRF5Q13568 498 aa3.67□□□□□ -1.82
SMARCAD1-202ENST00000359052 C1QBPQ07021 282 aaKnown RBP3.66□□□□□ -1.82
SMARCAD1-202ENST00000359052 SAMD1Q6SPF0 538 aaPredicted RBP3.66□□□□□ -1.82
SMARCAD1-202ENST00000359052 C7P10643 843 aa3.66□□□□□ -1.82
SMARCAD1-202ENST00000359052 MKRN3Q13064 507 aaKnown RBP3.66□□□□□ -1.82
SMARCAD1-202ENST00000359052 UNCXA6NJT0 531 aa3.65□□□□□ -1.83
SMARCAD1-202ENST00000359052 LDLRAD1Q5T700 205 aa3.65□□□□□ -1.83
SMARCAD1-202ENST00000359052 NPM2Q86SE8 214 aaKnown RBP3.64□□□□□ -1.83
SMARCAD1-202ENST00000359052 TXNDC2Q86VQ3 553 aa3.64□□□□□ -1.83
SMARCAD1-202ENST00000359052 SPOCK2Q92563 424 aa3.64□□□□□ -1.83
SMARCAD1-202ENST00000359052 POLA2Q14181 598 aa3.64□□□□□ -1.83
SMARCAD1-202ENST00000359052 ZNF692Q9BU19 519 aaPredicted RBP3.63□□□□□ -1.83
SMARCAD1-202ENST00000359052 LMOD2Q6P5Q4 547 aa3.62□□□□□ -1.83
SMARCAD1-202ENST00000359052 SCRIBQ14160 1630 aa3.62□□□□□ -1.83
SMARCAD1-202ENST00000359052 SLC39A13Q96H72 371 aa3.62□□□□□ -1.83
SMARCAD1-202ENST00000359052 AMHR2Q16671 573 aa3.61□□□□□ -1.83
SMARCAD1-202ENST00000359052 POTEHQ6S545 545 aa3.61□□□□□ -1.83
SMARCAD1-202ENST00000359052 MFRPQ9BY79 579 aa3.61□□□□□ -1.83
SMARCAD1-202ENST00000359052 SLC24A3Q9HC58 644 aa3.61□□□□□ -1.83
SMARCAD1-202ENST00000359052 SCAF1Q9H7N4 1312 aaKnown RBP3.6□□□□□ -1.83
SMARCAD1-202ENST00000359052 NACADO15069 1562 aa3.6□□□□□ -1.83
SMARCAD1-202ENST00000359052 ARHGEF1Q92888 912 aaKnown RBP3.6□□□□□ -1.83
SMARCAD1-202ENST00000359052 ZC3H4Q9UPT8 1303 aaKnown RBP3.59□□□□□ -1.83
SMARCAD1-202ENST00000359052 CRISPLD2Q9H0B8 497 aa3.59□□□□□ -1.84
SMARCAD1-202ENST00000359052 DNAJC14Q6Y2X3 702 aaPredicted RBP3.59□□□□□ -1.84
SMARCAD1-202ENST00000359052 ZNF428Q96B54 188 aa3.58□□□□□ -1.84
SMARCAD1-202ENST00000359052 WDR97A6NE52 1622 aa3.58□□□□□ -1.84
SMARCAD1-202ENST00000359052 PRIM1P49642 420 aaKnown RBP3.58□□□□□ -1.84
SMARCAD1-202ENST00000359052 ECM1Q16610 540 aa3.58□□□□□ -1.84
SMARCAD1-202ENST00000359052 MS4A4AQ96JQ5 239 aa3.58□□□□□ -1.84
SMARCAD1-202ENST00000359052 TRAK2O60296 914 aa3.56□□□□□ -1.84
SMARCAD1-202ENST00000359052 C14orf37Q86TY3 774 aa3.56□□□□□ -1.84
SMARCAD1-202ENST00000359052 KDM4FA0A1W2PPD8 638 aa3.56□□□□□ -1.84
SMARCAD1-202ENST00000359052 PLSCR2Q9NRY7 297 aa3.56□□□□□ -1.84
SMARCAD1-202ENST00000359052 ECM2O94769 699 aaPredicted RBP3.56□□□□□ -1.84
SMARCAD1-202ENST00000359052 PPP1R37O75864 691 aa3.56□□□□□ -1.84
SMARCAD1-202ENST00000359052 PUS7Q96PZ0 661 aaKnown RBP3.55□□□□□ -1.84
SMARCAD1-202ENST00000359052 TMEM88BA6NKF7 163 aa3.55□□□□□ -1.84
SMARCAD1-202ENST00000359052 TRIM66O15016 1216 aa3.55□□□□□ -1.84
SMARCAD1-202ENST00000359052 SUPT5HO00267 1087 aaKnown RBP3.55□□□□□ -1.84
SMARCAD1-202ENST00000359052 AMOTL2Q9Y2J4 779 aa3.54□□□□□ -1.84
SMARCAD1-202ENST00000359052 REPIN1Q9BWE0 567 aaKnown RBP3.54□□□□□ -1.84
SMARCAD1-202ENST00000359052 CREBZFQ9NS37 354 aa3.54□□□□□ -1.84
SMARCAD1-202ENST00000359052 KIAA1522Q9P206 1035 aaPredicted RBP3.54□□□□□ -1.84
SMARCAD1-202ENST00000359052 MCM6Q14566 821 aa3.54□□□□□ -1.84
SMARCAD1-202ENST00000359052 SLAIN2Q9P270 581 aa3.53□□□□□ -1.84
SMARCAD1-202ENST00000359052 KIF3CO14782 793 aa3.53□□□□□ -1.84
SMARCAD1-202ENST00000359052 KDM4CQ9H3R0 1056 aa3.53□□□□□ -1.84
SMARCAD1-202ENST00000359052 PLEKHG5O94827 1062 aa3.53□□□□□ -1.84
SMARCAD1-202ENST00000359052 PHLDB3Q6NSJ2 640 aa3.53□□□□□ -1.84
SMARCAD1-202ENST00000359052 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.53□□□□□ -1.84
SMARCAD1-202ENST00000359052 SEMA3EO15041 775 aa3.52□□□□□ -1.85
SMARCAD1-202ENST00000359052 DSG3P32926 999 aa3.52□□□□□ -1.85
SMARCAD1-202ENST00000359052 GPBP1L1Q9HC44 474 aaPredicted RBP3.52□□□□□ -1.85
SMARCAD1-202ENST00000359052 TRIM41Q8WV44 630 aa3.52□□□□□ -1.85
SMARCAD1-202ENST00000359052 FAM117AQ9C073 453 aa3.52□□□□□ -1.85
SMARCAD1-202ENST00000359052 ADAMTS19Q8TE59 1207 aa3.51□□□□□ -1.85
SMARCAD1-202ENST00000359052 RBM47A0AV96 593 aaKnown RBP3.51□□□□□ -1.85
SMARCAD1-202ENST00000359052 RIOK3O14730 519 aaKnown RBP3.51□□□□□ -1.85
SMARCAD1-202ENST00000359052 VAMP1P23763 118 aa3.5□□□□□ -1.85
SMARCAD1-202ENST00000359052 DKK1O94907 266 aa3.5□□□□□ -1.85
SMARCAD1-202ENST00000359052 CFAP44Q96MT7 982 aa3.5□□□□□ -1.85
SMARCAD1-202ENST00000359052 RSPH6AQ9H0K4 717 aa3.5□□□□□ -1.85
SMARCAD1-202ENST00000359052 PHOX2BQ99453 314 aa3.49□□□□□ -1.85
SMARCAD1-202ENST00000359052 SIRT1Q96EB6 747 aa3.49□□□□□ -1.85
SMARCAD1-202ENST00000359052 FARP1Q9Y4F1 1045 aaPredicted RBP3.49□□□□□ -1.85
SMARCAD1-202ENST00000359052 TBC1D12O60347 775 aa3.49□□□□□ -1.85
SMARCAD1-202ENST00000359052 PTGER2P43116 358 aa3.49□□□□□ -1.85
SMARCAD1-202ENST00000359052 CCDC125Q86Z20 511 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms