RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 BAZ1AQ9NRL2 1556 aaPredicted RBP21.94■■□□□ 1.1
SHTN1-202ENST00000355371 RRP7BPQ9NSQ0 103 aa21.93■■□□□ 1.1
SHTN1-202ENST00000355371 PLEKHD1A6NEE1 506 aa21.93■■□□□ 1.1
SHTN1-202ENST00000355371 CCDC136Q96JN2 1154 aa21.91■■□□□ 1.1
SHTN1-202ENST00000355371 MIER1Q8N108 512 aa21.9■■□□□ 1.1
SHTN1-202ENST00000355371 SALL2Q9Y467 1007 aaPredicted RBP21.9■■□□□ 1.1
SHTN1-202ENST00000355371 HSP90AA1P07900 732 aaKnown RBP21.86■■□□□ 1.09
SHTN1-202ENST00000355371 ANP32BQ92688 251 aaKnown RBP21.81■■□□□ 1.08
SHTN1-202ENST00000355371 HIRIP3Q9BW71 556 aaPredicted RBP21.78■■□□□ 1.08
SHTN1-202ENST00000355371 CFDP1Q9UEE9 299 aaPredicted RBP21.78■■□□□ 1.08
SHTN1-202ENST00000355371 PLPPR3Q6T4P5 718 aa21.77■■□□□ 1.07
SHTN1-202ENST00000355371 KCNH8Q96L42 1107 aa21.76■■□□□ 1.07
SHTN1-202ENST00000355371 CDCA8Q53HL2 280 aa21.72■■□□□ 1.07
SHTN1-202ENST00000355371 FHAD1B1AJZ9 1412 aa21.71■■□□□ 1.07
SHTN1-202ENST00000355371 CECR2Q9BXF3 1484 aa21.7■■□□□ 1.06
SHTN1-202ENST00000355371 SCAF1Q9H7N4 1312 aaKnown RBP21.65■■□□□ 1.06
SHTN1-202ENST00000355371 MYH16Q9H6N6 1097 aa21.64■■□□□ 1.06
SHTN1-202ENST00000355371 RGL3Q3MIN7 710 aa21.64■■□□□ 1.05
SHTN1-202ENST00000355371 PPP1R15AO75807 674 aaPredicted RBP21.64■■□□□ 1.05
SHTN1-202ENST00000355371 CARD11Q9BXL7 1154 aa21.61■■□□□ 1.05
SHTN1-202ENST00000355371 CCNB3Q8WWL7 1395 aa21.61■■□□□ 1.05
SHTN1-202ENST00000355371 CARMIL1Q5VZK9 1371 aa21.6■■□□□ 1.05
SHTN1-202ENST00000355371 IRX6P78412 446 aaPredicted RBP21.6■■□□□ 1.05
SHTN1-202ENST00000355371 CFAP53Q96M91 514 aa21.6■■□□□ 1.05
SHTN1-202ENST00000355371 KNSTRNQ9Y448 316 aa21.59■■□□□ 1.05
SHTN1-202ENST00000355371 ERCC6Q03468 1493 aa21.57■■□□□ 1.04
SHTN1-202ENST00000355371 CUX2O14529 1486 aa21.57■■□□□ 1.04
SHTN1-202ENST00000355371 SOGA1O94964 1423 aa21.55■■□□□ 1.04
SHTN1-202ENST00000355371 TIMELESSQ9UNS1 1208 aa21.55■■□□□ 1.04
SHTN1-202ENST00000355371 DDRGK1Q96HY6 314 aa21.51■■□□□ 1.03
SHTN1-202ENST00000355371 SIN3AQ96ST3 1273 aa21.51■■□□□ 1.03
SHTN1-202ENST00000355371 CCDC88BA6NC98 1476 aa21.48■■□□□ 1.03
SHTN1-202ENST00000355371 NBR1Q14596 966 aa21.48■■□□□ 1.03
SHTN1-202ENST00000355371 VPS8Q8N3P4 1428 aa21.48■■□□□ 1.03
SHTN1-202ENST00000355371 MROH2BQ7Z745 1585 aa21.47■■□□□ 1.03
SHTN1-202ENST00000355371 BECN1Q14457 450 aa21.46■■□□□ 1.03
SHTN1-202ENST00000355371 SMARCA2P51531 1590 aa21.46■■□□□ 1.03
SHTN1-202ENST00000355371 EIF4G1Q04637 1599 aaKnown RBP21.45■■□□□ 1.02
SHTN1-202ENST00000355371 C14orf37Q86TY3 774 aa21.41■■□□□ 1.02
SHTN1-202ENST00000355371 SETD5Q9C0A6 1442 aa21.4■■□□□ 1.02
SHTN1-202ENST00000355371 SUPT16HQ9Y5B9 1047 aaKnown RBP21.4■■□□□ 1.02
SHTN1-202ENST00000355371 ARHGAP35Q9NRY4 1499 aa21.4■■□□□ 1.02
SHTN1-202ENST00000355371 NUDCQ9Y266 331 aa21.39■■□□□ 1.01
SHTN1-202ENST00000355371 SENP3Q9H4L4 574 aaPredicted RBP21.38■■□□□ 1.01
SHTN1-202ENST00000355371 EIF5BO60841 1220 aaKnown RBP21.37■■□□□ 1.01
SHTN1-202ENST00000355371 ARID4BQ4LE39 1312 aaPredicted RBP21.37■■□□□ 1.01
SHTN1-202ENST00000355371 KANK1Q14678 1352 aa21.36■■□□□ 1.01
SHTN1-202ENST00000355371 ZBTB7CA1YPR0 619 aa21.36■■□□□ 1.01
SHTN1-202ENST00000355371 MAPK8IP3Q9UPT6 1336 aa21.36■■□□□ 1.01
SHTN1-202ENST00000355371 ANP32EQ9BTT0 268 aa21.34■■□□□ 1.01
SHTN1-202ENST00000355371 PPP4R2Q9NY27 417 aa21.34■■□□□ 1.01
SHTN1-202ENST00000355371 ABCC8Q09428 1581 aa21.34■■□□□ 1.01
SHTN1-202ENST00000355371 TMF1P82094 1093 aa21.34■■□□□ 1.01
SHTN1-202ENST00000355371 POGKQ9P215 609 aa21.34■■□□□ 1.01
SHTN1-202ENST00000355371 FTSJ3Q8IY81 847 aaKnown RBP21.33■■□□□ 1.01
SHTN1-202ENST00000355371 PDS5BQ9NTI5 1447 aa21.31■■□□□ 1
SHTN1-202ENST00000355371 DCAF11Q8TEB1 546 aa21.31■■□□□ 1
SHTN1-202ENST00000355371 PPM1GO15355 546 aaPredicted RBP21.3■■□□□ 1
SHTN1-202ENST00000355371 TOP2AP11388 1531 aaKnown RBP21.3■■□□□ 1
SHTN1-202ENST00000355371 CCER2I3L3R5 266 aa21.3■■□□□ 1
SHTN1-202ENST00000355371 FMN1Q68DA7 1419 aa21.29■■□□□ 1
SHTN1-202ENST00000355371 CARMIL2Q6F5E8 1435 aa21.29■■□□□ 1
SHTN1-202ENST00000355371 CHMP4BQ9H444 224 aaKnown RBP21.28■■□□□ 1
SHTN1-202ENST00000355371 GOLGA6L22H0YM25 854 aa21.27■■□□□ 1
SHTN1-202ENST00000355371 CASC1Q6TDU7 716 aa21.27■■□□□ 1
SHTN1-202ENST00000355371 PNNQ9H307 717 aaKnown RBP21.27■■□□□ 1
SHTN1-202ENST00000355371 MS4A1P11836 297 aa21.26■□□□□ 0.99
SHTN1-202ENST00000355371 NCLP19338 710 aaKnown RBP21.26■□□□□ 0.99
SHTN1-202ENST00000355371 CC2D1BQ5T0F9 858 aaKnown RBP21.25■□□□□ 0.99
SHTN1-202ENST00000355371 NEUROD2Q15784 382 aa21.24■□□□□ 0.99
SHTN1-202ENST00000355371 ARXQ96QS3 562 aa21.24■□□□□ 0.99
SHTN1-202ENST00000355371 KANK4Q5T7N3 995 aaPredicted RBP21.24■□□□□ 0.99
SHTN1-202ENST00000355371 SENP3-EIF4A1A0A087X0R7 540 aa21.22■□□□□ 0.99
SHTN1-202ENST00000355371 A0A0G2JS52 829 aa21.22■□□□□ 0.99
SHTN1-202ENST00000355371 PLEKHG5O94827 1062 aa21.2■□□□□ 0.98
SHTN1-202ENST00000355371 HDGFP51858 240 aaKnown RBP21.19■□□□□ 0.98
SHTN1-202ENST00000355371 HSPA5P11021 654 aaKnown RBP21.19■□□□□ 0.98
SHTN1-202ENST00000355371 LAS1LQ9Y4W2 734 aaKnown RBP21.18■□□□□ 0.98
SHTN1-202ENST00000355371 HAP1P54257 671 aaPredicted RBP21.18■□□□□ 0.98
SHTN1-202ENST00000355371 PKD2Q13563 968 aa21.18■□□□□ 0.98
SHTN1-202ENST00000355371 GLIPR1L2Q4G1C9 344 aa21.18■□□□□ 0.98
SHTN1-202ENST00000355371 RAB3GAP2Q9H2M9 1393 aa21.16■□□□□ 0.98
SHTN1-202ENST00000355371 TNNT2P45379 298 aaPredicted RBP21.15■□□□□ 0.98
SHTN1-202ENST00000355371 FRAT1Q92837 279 aaPredicted RBP21.15■□□□□ 0.98
SHTN1-202ENST00000355371 WIZO95785 1651 aa21.14■□□□□ 0.98
SHTN1-202ENST00000355371 U2SURPO15042 1029 aaKnown RBP21.14■□□□□ 0.98
SHTN1-202ENST00000355371 TDRD9Q8NDG6 1382 aaKnown RBP21.13■□□□□ 0.97
SHTN1-202ENST00000355371 ANKRD30AQ9BXX3 1397 aa21.12■□□□□ 0.97
SHTN1-202ENST00000355371 RAPGEF2Q9Y4G8 1499 aa21.12■□□□□ 0.97
SHTN1-202ENST00000355371 TRIM44Q96DX7 344 aaPredicted RBP21.11■□□□□ 0.97
SHTN1-202ENST00000355371 MPHOSPH9Q99550 1183 aa21.11■□□□□ 0.97
SHTN1-202ENST00000355371 CADPSQ9ULU8 1353 aa21.1■□□□□ 0.97
SHTN1-202ENST00000355371 KTN1Q86UP2 1357 aaKnown RBP21.1■□□□□ 0.97
SHTN1-202ENST00000355371 MORC1Q86VD1 984 aa21.1■□□□□ 0.97
SHTN1-202ENST00000355371 RGS3P49796 1198 aa21.09■□□□□ 0.97
SHTN1-202ENST00000355371 SRPK2P78362 688 aaKnown RBP21.07■□□□□ 0.96
SHTN1-202ENST00000355371 EFCAB2Q5VUJ9 269 aa21.07■□□□□ 0.96
SHTN1-202ENST00000355371 NUP155O75694 1391 aa21.06■□□□□ 0.96
SHTN1-202ENST00000355371 RALBP1Q15311 655 aa21.04■□□□□ 0.96
SHTN1-202ENST00000355371 B4GALNT3Q6L9W6 998 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms