RNA–Protein interactions for RNA: ENST00000354785.8

FN1-203, Transcript of fibronectin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FN1, Length 8,905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-203ENST00000354785 UPF2Q9HAU5 1272 aaKnown RBP14.71□□□□□ -0.05
FN1-203ENST00000354785 WIZO95785 1651 aa14.7□□□□□ -0.06
FN1-203ENST00000354785 WDR43Q15061 677 aaKnown RBP eCLIP14.69□□□□□ -0.06
FN1-203ENST00000354785 MRS2Q9HD23 443 aa14.68□□□□□ -0.06
FN1-203ENST00000354785 CCDC136Q96JN2 1154 aa14.67□□□□□ -0.06
FN1-203ENST00000354785 ERCC6Q03468 1493 aa14.66□□□□□ -0.06
FN1-203ENST00000354785 MIER1Q8N108 512 aa14.65□□□□□ -0.06
FN1-203ENST00000354785 EIF4G2P78344 907 aaKnown RBP eCLIP14.65□□□□□ -0.06
FN1-203ENST00000354785 KCNH8Q96L42 1107 aa14.64□□□□□ -0.07
FN1-203ENST00000354785 ABCC8Q09428 1581 aa14.63□□□□□ -0.07
FN1-203ENST00000354785 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.62□□□□□ -0.07
FN1-203ENST00000354785 SENP3Q9H4L4 574 aaPredicted RBP14.61□□□□□ -0.07
FN1-203ENST00000354785 ANP32BQ92688 251 aaKnown RBP14.6□□□□□ -0.07
FN1-203ENST00000354785 PLEKHD1A6NEE1 506 aa14.6□□□□□ -0.07
FN1-203ENST00000354785 EIF4G1Q04637 1599 aaKnown RBP14.59□□□□□ -0.07
FN1-203ENST00000354785 CECR2Q9BXF3 1484 aa14.59□□□□□ -0.07
FN1-203ENST00000354785 TNIKQ9UKE5 1360 aa14.58□□□□□ -0.08
FN1-203ENST00000354785 IRX6P78412 446 aaPredicted RBP14.56□□□□□ -0.08
FN1-203ENST00000354785 SCAF1Q9H7N4 1312 aaKnown RBP14.55□□□□□ -0.08
FN1-203ENST00000354785 RGL3Q3MIN7 710 aa14.55□□□□□ -0.08
FN1-203ENST00000354785 CFDP1Q9UEE9 299 aaPredicted RBP14.55□□□□□ -0.08
FN1-203ENST00000354785 SMARCA2P51531 1590 aa14.54□□□□□ -0.08
FN1-203ENST00000354785 KAT6BQ8WYB5 2073 aa14.54□□□□□ -0.08
FN1-203ENST00000354785 FHAD1B1AJZ9 1412 aa14.53□□□□□ -0.08
FN1-203ENST00000354785 NBR1Q14596 966 aa14.52□□□□□ -0.08
FN1-203ENST00000354785 MROH2BQ7Z745 1585 aa14.51□□□□□ -0.09
FN1-203ENST00000354785 PPP1R15AO75807 674 aaPredicted RBP14.5□□□□□ -0.09
FN1-203ENST00000354785 MYH16Q9H6N6 1097 aa14.49□□□□□ -0.09
FN1-203ENST00000354785 CUX2O14529 1486 aa14.47□□□□□ -0.09
FN1-203ENST00000354785 C14orf37Q86TY3 774 aa14.46□□□□□ -0.09
FN1-203ENST00000354785 PLEKHG5O94827 1062 aa14.46□□□□□ -0.09
FN1-203ENST00000354785 CCDC88BA6NC98 1476 aa14.46□□□□□ -0.09
FN1-203ENST00000354785 KNSTRNQ9Y448 316 aa14.46□□□□□ -0.1
FN1-203ENST00000354785 CCNB3Q8WWL7 1395 aa14.45□□□□□ -0.1
FN1-203ENST00000354785 SOGA1O94964 1423 aa14.45□□□□□ -0.1
FN1-203ENST00000354785 ARXQ96QS3 562 aa14.43□□□□□ -0.1
FN1-203ENST00000354785 CARD11Q9BXL7 1154 aa14.43□□□□□ -0.1
FN1-203ENST00000354785 ARID4BQ4LE39 1312 aaPredicted RBP14.43□□□□□ -0.1
FN1-203ENST00000354785 CDCA8Q53HL2 280 aa14.42□□□□□ -0.1
FN1-203ENST00000354785 A0A0G2JS52 829 aa14.42□□□□□ -0.1
FN1-203ENST00000354785 SENP3-EIF4A1A0A087X0R7 540 aa14.42□□□□□ -0.1
FN1-203ENST00000354785 ZBTB7CA1YPR0 619 aa14.41□□□□□ -0.1
FN1-203ENST00000354785 CARMIL1Q5VZK9 1371 aa14.4□□□□□ -0.1
FN1-203ENST00000354785 TOP2AP11388 1531 aaKnown RBP14.4□□□□□ -0.1
FN1-203ENST00000354785 SMARCA4P51532 1647 aa14.4□□□□□ -0.1
FN1-203ENST00000354785 ARHGAP35Q9NRY4 1499 aa14.4□□□□□ -0.1
FN1-203ENST00000354785 PPM1GO15355 546 aaPredicted RBP14.4□□□□□ -0.1
FN1-203ENST00000354785 EIF5BO60841 1220 aaKnown RBP14.39□□□□□ -0.11
FN1-203ENST00000354785 PRDM2Q13029 1718 aa14.38□□□□□ -0.11
FN1-203ENST00000354785 SIN3AQ96ST3 1273 aa14.37□□□□□ -0.11
FN1-203ENST00000354785 CFAP53Q96M91 514 aa14.37□□□□□ -0.11
FN1-203ENST00000354785 SUPT16HQ9Y5B9 1047 aaKnown RBP14.36□□□□□ -0.11
FN1-203ENST00000354785 FTSJ3Q8IY81 847 aaKnown RBP14.35□□□□□ -0.11
FN1-203ENST00000354785 VPS8Q8N3P4 1428 aa14.34□□□□□ -0.11
FN1-203ENST00000354785 BECN1Q14457 450 aa14.32□□□□□ -0.12
FN1-203ENST00000354785 TNNT2P45379 298 aaPredicted RBP14.29□□□□□ -0.12
FN1-203ENST00000354785 NEUROD2Q15784 382 aa14.29□□□□□ -0.12
FN1-203ENST00000354785 DCAF11Q8TEB1 546 aa14.29□□□□□ -0.12
FN1-203ENST00000354785 POGKQ9P215 609 aa14.29□□□□□ -0.12
FN1-203ENST00000354785 KANK1Q14678 1352 aa14.29□□□□□ -0.12
FN1-203ENST00000354785 DDRGK1Q96HY6 314 aa14.29□□□□□ -0.12
FN1-203ENST00000354785 CC2D1BQ5T0F9 858 aaKnown RBP14.28□□□□□ -0.12
FN1-203ENST00000354785 SETD5Q9C0A6 1442 aa14.28□□□□□ -0.12
FN1-203ENST00000354785 LAS1LQ9Y4W2 734 aaKnown RBP14.28□□□□□ -0.12
FN1-203ENST00000354785 HAP1P54257 671 aaPredicted RBP14.26□□□□□ -0.13
FN1-203ENST00000354785 MAPK8IP3Q9UPT6 1336 aa14.26□□□□□ -0.13
FN1-203ENST00000354785 FMN1Q68DA7 1419 aa14.24□□□□□ -0.13
FN1-203ENST00000354785 PDS5BQ9NTI5 1447 aa14.24□□□□□ -0.13
FN1-203ENST00000354785 CASC1Q6TDU7 716 aa14.23□□□□□ -0.13
FN1-203ENST00000354785 NUDCQ9Y266 331 aa14.22□□□□□ -0.13
FN1-203ENST00000354785 CARMIL2Q6F5E8 1435 aa14.21□□□□□ -0.13
FN1-203ENST00000354785 TMF1P82094 1093 aa14.21□□□□□ -0.13
FN1-203ENST00000354785 LMOD2Q6P5Q4 547 aa14.2□□□□□ -0.14
FN1-203ENST00000354785 FRAT1Q92837 279 aaPredicted RBP14.2□□□□□ -0.14
FN1-203ENST00000354785 FOXD1Q16676 465 aa14.19□□□□□ -0.14
FN1-203ENST00000354785 U2SURPO15042 1029 aaKnown RBP14.19□□□□□ -0.14
FN1-203ENST00000354785 GOLGA6L22H0YM25 854 aa14.19□□□□□ -0.14
FN1-203ENST00000354785 KANK4Q5T7N3 995 aaPredicted RBP14.18□□□□□ -0.14
FN1-203ENST00000354785 NCLP19338 710 aaKnown RBP14.17□□□□□ -0.14
FN1-203ENST00000354785 RAB3GAP2Q9H2M9 1393 aa14.17□□□□□ -0.14
FN1-203ENST00000354785 RGS3P49796 1198 aa14.16□□□□□ -0.14
FN1-203ENST00000354785 PNNQ9H307 717 aaKnown RBP14.16□□□□□ -0.14
FN1-203ENST00000354785 TRIM44Q96DX7 344 aaPredicted RBP14.15□□□□□ -0.14
FN1-203ENST00000354785 PPP4R2Q9NY27 417 aa14.15□□□□□ -0.14
FN1-203ENST00000354785 RAPGEF2Q9Y4G8 1499 aa14.15□□□□□ -0.14
FN1-203ENST00000354785 SRPK2P78362 688 aaKnown RBP14.15□□□□□ -0.14
FN1-203ENST00000354785 ANP32EQ9BTT0 268 aa14.15□□□□□ -0.14
FN1-203ENST00000354785 ROCK2O75116 1388 aaKnown RBP14.14□□□□□ -0.15
FN1-203ENST00000354785 TDRD9Q8NDG6 1382 aaKnown RBP14.14□□□□□ -0.15
FN1-203ENST00000354785 MLECQ14165 292 aa14.13□□□□□ -0.15
FN1-203ENST00000354785 TIMELESSQ9UNS1 1208 aa14.13□□□□□ -0.15
FN1-203ENST00000354785 GLIPR1L2Q4G1C9 344 aa14.13□□□□□ -0.15
FN1-203ENST00000354785 SAFB2Q14151 953 aaKnown RBP eCLIP14.13□□□□□ -0.15
FN1-203ENST00000354785 B4GALNT3Q6L9W6 998 aa14.13□□□□□ -0.15
FN1-203ENST00000354785 CCDC18Q5T9S5 1454 aa14.13□□□□□ -0.15
FN1-203ENST00000354785 PKD2Q13563 968 aa14.13□□□□□ -0.15
FN1-203ENST00000354785 CHMP4BQ9H444 224 aaKnown RBP14.1□□□□□ -0.15
FN1-203ENST00000354785 SOX12O15370 315 aa14.1□□□□□ -0.15
FN1-203ENST00000354785 TPRNQ4KMQ1 711 aa14.09□□□□□ -0.15
FN1-203ENST00000354785 NUP155O75694 1391 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms