RNA–Protein interactions for RNA: ENST00000354749.6

TTC3-201, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 9,084 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-201ENST00000354749 ESF1Q9H501 851 aaKnown RBP8.58□□□□□ -1.04
TTC3-201ENST00000354749 GOLGA3Q08378 1498 aa8.57□□□□□ -1.04
TTC3-201ENST00000354749 CEP162Q5TB80 1403 aa8.57□□□□□ -1.04
TTC3-201ENST00000354749 CHIC2Q9UKJ5 165 aa8.56□□□□□ -1.04
TTC3-201ENST00000354749 STAG3Q9UJ98 1225 aa8.56□□□□□ -1.04
TTC3-201ENST00000354749 CHGAP10645 457 aaKnown RBP8.55□□□□□ -1.04
TTC3-201ENST00000354749 NOP58Q9Y2X3 529 aaKnown RBP8.54□□□□□ -1.04
TTC3-201ENST00000354749 RSF1Q96T23 1441 aaPredicted RBP8.54□□□□□ -1.04
TTC3-201ENST00000354749 CDK11BP21127 795 aaKnown RBP8.53□□□□□ -1.04
TTC3-201ENST00000354749 TSPY4P0CV99 314 aa8.53□□□□□ -1.04
TTC3-201ENST00000354749 TSPY10P0CW01 314 aa8.53□□□□□ -1.04
TTC3-201ENST00000354749 PPP4R2Q9NY27 417 aa8.53□□□□□ -1.04
TTC3-201ENST00000354749 MYO15BQ96JP2 1530 aa8.53□□□□□ -1.04
TTC3-201ENST00000354749 PTMAP06454 111 aaKnown RBP8.52□□□□□ -1.04
TTC3-201ENST00000354749 CASC1Q6TDU7 716 aa8.52□□□□□ -1.05
TTC3-201ENST00000354749 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.5□□□□□ -1.056e-8■■□□□ 14.3
TTC3-201ENST00000354749 KDM2AQ9Y2K7 1162 aa8.5□□□□□ -1.05
TTC3-201ENST00000354749 CDCA8Q53HL2 280 aa8.5□□□□□ -1.05
TTC3-201ENST00000354749 SUPT16HQ9Y5B9 1047 aaKnown RBP8.5□□□□□ -1.05
TTC3-201ENST00000354749 ZRSR1Q15695 479 aaKnown RBP8.49□□□□□ -1.05
TTC3-201ENST00000354749 NAP1L5Q96NT1 182 aaPredicted RBP8.49□□□□□ -1.05
TTC3-201ENST00000354749 CFAP53Q96M91 514 aa8.49□□□□□ -1.05
TTC3-201ENST00000354749 HIRIP3Q9BW71 556 aaPredicted RBP8.49□□□□□ -1.05
TTC3-201ENST00000354749 LAS1LQ9Y4W2 734 aaKnown RBP8.48□□□□□ -1.05
TTC3-201ENST00000354749 KNSTRNQ9Y448 316 aa8.48□□□□□ -1.05
TTC3-201ENST00000354749 FTSJ3Q8IY81 847 aaKnown RBP8.47□□□□□ -1.05
TTC3-201ENST00000354749 TNIKQ9UKE5 1360 aa8.47□□□□□ -1.05
TTC3-201ENST00000354749 CEP164Q9UPV0 1460 aa8.47□□□□□ -1.05
TTC3-201ENST00000354749 DNTTIP2Q5QJE6 756 aaKnown RBP8.46□□□□□ -1.05
TTC3-201ENST00000354749 CHMP4BQ9H444 224 aaKnown RBP8.46□□□□□ -1.06
TTC3-201ENST00000354749 RRP7BPQ9NSQ0 103 aa8.46□□□□□ -1.06
TTC3-201ENST00000354749 GOLGA6L6A8MZA4 724 aa8.45□□□□□ -1.06
TTC3-201ENST00000354749 NPM1P06748 294 aaKnown RBP eCLIP8.44□□□□□ -1.06
TTC3-201ENST00000354749 L1TD1Q5T7N2 865 aaKnown RBP8.44□□□□□ -1.06
TTC3-201ENST00000354749 MS4A1P11836 297 aa8.43□□□□□ -1.06
TTC3-201ENST00000354749 WRNQ14191 1432 aaPredicted RBP eCLIP8.43□□□□□ -1.06
TTC3-201ENST00000354749 RGS3P49796 1198 aa8.43□□□□□ -1.06
TTC3-201ENST00000354749 RTN4Q9NQC3 1192 aaKnown RBP8.42□□□□□ -1.06
TTC3-201ENST00000354749 CCER2I3L3R5 266 aa8.42□□□□□ -1.06
TTC3-201ENST00000354749 CARD11Q9BXL7 1154 aa8.42□□□□□ -1.06
TTC3-201ENST00000354749 NRDCO43847 1150 aa8.42□□□□□ -1.06
TTC3-201ENST00000354749 CHAF1AQ13111 956 aaPredicted RBP8.42□□□□□ -1.06
TTC3-201ENST00000354749 TIMELESSQ9UNS1 1208 aa8.41□□□□□ -1.06
TTC3-201ENST00000354749 MAPK8IP3Q9UPT6 1336 aa8.41□□□□□ -1.06
TTC3-201ENST00000354749 DEKP35659 375 aaKnown RBP8.41□□□□□ -1.06
TTC3-201ENST00000354749 KIF27Q86VH2 1401 aa8.4□□□□□ -1.06
TTC3-201ENST00000354749 HSCBQ8IWL3 235 aa8.4□□□□□ -1.07
TTC3-201ENST00000354749 HSP90AB1P08238 724 aaKnown RBP8.39□□□□□ -1.07
TTC3-201ENST00000354749 PPP1R15AO75807 674 aaPredicted RBP8.38□□□□□ -1.07
TTC3-201ENST00000354749 PLPPR3Q6T4P5 718 aa8.38□□□□□ -1.07
TTC3-201ENST00000354749 NUDCQ9Y266 331 aa8.38□□□□□ -1.07
TTC3-201ENST00000354749 CCNB3Q8WWL7 1395 aa8.38□□□□□ -1.07
TTC3-201ENST00000354749 RBM19Q9Y4C8 960 aaKnown RBP8.37□□□□□ -1.07
TTC3-201ENST00000354749 MSNP26038 577 aaKnown RBP8.37□□□□□ -1.07
TTC3-201ENST00000354749 FHAD1B1AJZ9 1412 aa8.37□□□□□ -1.07
TTC3-201ENST00000354749 B4GALNT3Q6L9W6 998 aa8.37□□□□□ -1.07
TTC3-201ENST00000354749 CFDP1Q9UEE9 299 aaPredicted RBP8.36□□□□□ -1.07
TTC3-201ENST00000354749 PLEKHD1A6NEE1 506 aa8.36□□□□□ -1.07
TTC3-201ENST00000354749 PTMSP20962 102 aa8.36□□□□□ -1.07
TTC3-201ENST00000354749 CHMP7Q8WUX9 453 aaPredicted RBP8.36□□□□□ -1.07
TTC3-201ENST00000354749 FRAT1Q92837 279 aaPredicted RBP8.36□□□□□ -1.07
TTC3-201ENST00000354749 CFAP44Q96MT7 982 aa8.35□□□□□ -1.07
TTC3-201ENST00000354749 RB1CC1Q8TDY2 1594 aa8.34□□□□□ -1.07
TTC3-201ENST00000354749 RGL3Q3MIN7 710 aa8.34□□□□□ -1.08
TTC3-201ENST00000354749 PLCB2Q00722 1185 aa8.33□□□□□ -1.08
TTC3-201ENST00000354749 NEUROD2Q15784 382 aa8.33□□□□□ -1.08
TTC3-201ENST00000354749 GOLGA6L4A6NEF3 574 aa8.33□□□□□ -1.08
TTC3-201ENST00000354749 SIN3AQ96ST3 1273 aa8.33□□□□□ -1.08
TTC3-201ENST00000354749 BAZ1BQ9UIG0 1483 aaKnown RBP8.33□□□□□ -1.08
TTC3-201ENST00000354749 SENP3-EIF4A1A0A087X0R7 540 aa8.32□□□□□ -1.08
TTC3-201ENST00000354749 MCCP23508 829 aa8.32□□□□□ -1.08
TTC3-201ENST00000354749 PNNQ9H307 717 aaKnown RBP8.32□□□□□ -1.08
TTC3-201ENST00000354749 TPRNQ4KMQ1 711 aa8.32□□□□□ -1.08
TTC3-201ENST00000354749 GBP4Q96PP9 640 aa8.32□□□□□ -1.08
TTC3-201ENST00000354749 KTN1Q86UP2 1357 aaKnown RBP8.32□□□□□ -1.08
TTC3-201ENST00000354749 C14orf37Q86TY3 774 aa8.31□□□□□ -1.08
TTC3-201ENST00000354749 ARID4BQ4LE39 1312 aaPredicted RBP8.31□□□□□ -1.08
TTC3-201ENST00000354749 SETD5Q9C0A6 1442 aa8.31□□□□□ -1.08
TTC3-201ENST00000354749 FGD1P98174 961 aa8.31□□□□□ -1.08
TTC3-201ENST00000354749 VPS8Q8N3P4 1428 aa8.31□□□□□ -1.08
TTC3-201ENST00000354749 TCERG1O14776 1098 aaKnown RBP8.31□□□□□ -1.08
TTC3-201ENST00000354749 TMF1P82094 1093 aa8.3□□□□□ -1.08
TTC3-201ENST00000354749 CC2D1BQ5T0F9 858 aaKnown RBP8.3□□□□□ -1.08
TTC3-201ENST00000354749 HAP1P54257 671 aaPredicted RBP8.3□□□□□ -1.08
TTC3-201ENST00000354749 OS9Q13438 667 aaPredicted RBP8.3□□□□□ -1.08
TTC3-201ENST00000354749 ARHGAP35Q9NRY4 1499 aa8.3□□□□□ -1.08
TTC3-201ENST00000354749 KCNJ4P48050 445 aa8.29□□□□□ -1.08
TTC3-201ENST00000354749 KIAA2012Q0VF49 1180 aa8.29□□□□□ -1.08
TTC3-201ENST00000354749 ZBTB7CA1YPR0 619 aa8.29□□□□□ -1.08
TTC3-201ENST00000354749 SYAP1Q96A49 352 aaPredicted RBP8.27□□□□□ -1.09
TTC3-201ENST00000354749 IPO9Q96P70 1041 aaKnown RBP8.27□□□□□ -1.09
TTC3-201ENST00000354749 BAZ1AQ9NRL2 1556 aaPredicted RBP8.27□□□□□ -1.09
TTC3-201ENST00000354749 DRC7Q8IY82 874 aa8.27□□□□□ -1.09
TTC3-201ENST00000354749 RALBP1Q15311 655 aa8.27□□□□□ -1.09
TTC3-201ENST00000354749 A0A0G2JS52 829 aa8.26□□□□□ -1.09
TTC3-201ENST00000354749 POGKQ9P215 609 aa8.26□□□□□ -1.09
TTC3-201ENST00000354749 IPO8O15397 1037 aaKnown RBP8.26□□□□□ -1.09
TTC3-201ENST00000354749 TSHZ2Q9NRE2 1034 aa8.26□□□□□ -1.09
TTC3-201ENST00000354749 GOLGA6L3A6NEY3 463 aa8.26□□□□□ -1.09
TTC3-201ENST00000354749 RWDD1Q9H446 243 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms