RNA–Protein interactions for RNA: ENST00000354361.3

SYF2-202, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 2 BASIC

Gene SYF2, Length 926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-202ENST00000354361 RASEFQ8IZ41 740 aa11.23□□□□□ -0.61
SYF2-202ENST00000354361 PLCD3Q8N3E9 789 aa11.23□□□□□ -0.61
SYF2-202ENST00000354361 POTEB2H3BUK9 544 aa11.22□□□□□ -0.61
SYF2-202ENST00000354361 FKBP8Q14318 412 aa11.22□□□□□ -0.61
SYF2-202ENST00000354361 ATMINO43313 823 aaPredicted RBP11.21□□□□□ -0.61
SYF2-202ENST00000354361 KIF12Q96FN5 646 aa11.21□□□□□ -0.61
SYF2-202ENST00000354361 OTUD5Q96G74 571 aa11.19□□□□□ -0.62
SYF2-202ENST00000354361 METRNQ9UJH8 293 aa11.18□□□□□ -0.62
SYF2-202ENST00000354361 SLC39A7Q92504 469 aa11.16□□□□□ -0.62
SYF2-202ENST00000354361 MAP3K13O43283 966 aa11.14□□□□□ -0.63
SYF2-202ENST00000354361 C7P10643 843 aa11.14□□□□□ -0.63
SYF2-202ENST00000354361 ATN1P54259 1190 aaPredicted RBP11.13□□□□□ -0.63
SYF2-202ENST00000354361 ZBTB47Q9UFB7 747 aaPredicted RBP11.13□□□□□ -0.63
SYF2-202ENST00000354361 TRPC6Q9Y210 931 aa11.13□□□□□ -0.63
SYF2-202ENST00000354361 BMP2KQ9NSY1 1161 aaPredicted RBP11.11□□□□□ -0.63
SYF2-202ENST00000354361 NUBP1P53384 320 aa11.09□□□□□ -0.63
SYF2-202ENST00000354361 TIE1P35590 1138 aa11.07□□□□□ -0.64
SYF2-202ENST00000354361 POTEJP0CG39 1038 aa11.06□□□□□ -0.64
SYF2-202ENST00000354361 FAM212AQ96EL1 285 aa11.03□□□□□ -0.64
SYF2-202ENST00000354361 PCDHB13Q9Y5F0 798 aa11.03□□□□□ -0.64
SYF2-202ENST00000354361 TTLL13PA6NNM8 815 aa11.02□□□□□ -0.65
SYF2-202ENST00000354361 SGIP1Q9BQI5 828 aa11.01□□□□□ -0.65
SYF2-202ENST00000354361 POTEFA5A3E0 1075 aa11□□□□□ -0.65
SYF2-202ENST00000354361 MAMSTRQ6ZN01 415 aa10.99□□□□□ -0.65
SYF2-202ENST00000354361 FBXO3Q9UK99 471 aa10.99□□□□□ -0.65
SYF2-202ENST00000354361 IFNL1Q8IU54 200 aa10.97□□□□□ -0.65
SYF2-202ENST00000354361 SCUBE2Q9NQ36 999 aa10.95□□□□□ -0.66
SYF2-202ENST00000354361 TRIM35Q9UPQ4 493 aa10.95□□□□□ -0.66
SYF2-202ENST00000354361 COLQQ9Y215 455 aaPredicted RBP10.94□□□□□ -0.66
SYF2-202ENST00000354361 SEC24BO95487 1268 aa10.93□□□□□ -0.66
SYF2-202ENST00000354361 DCAF8Q5TAQ9 597 aa10.91□□□□□ -0.66
SYF2-202ENST00000354361 POTEMA6NI47 508 aa10.9□□□□□ -0.66
SYF2-202ENST00000354361 IER5LQ5T953 404 aa10.9□□□□□ -0.66
SYF2-202ENST00000354361 TMEM106CQ9BVX2 250 aa10.9□□□□□ -0.66
SYF2-202ENST00000354361 PYGBP11216 843 aa10.89□□□□□ -0.67
SYF2-202ENST00000354361 VASPP50552 380 aaPredicted RBP10.88□□□□□ -0.67
SYF2-202ENST00000354361 POTEGQ6S5H5 508 aa10.88□□□□□ -0.67
SYF2-202ENST00000354361 PLSCR2Q9NRY7 297 aa10.88□□□□□ -0.67
SYF2-202ENST00000354361 KLHL34Q8N239 644 aa10.85□□□□□ -0.67
SYF2-202ENST00000354361 LCE2DQ5TA82 110 aaPredicted RBP10.82□□□□□ -0.68
SYF2-202ENST00000354361 FAM163AQ96GL9 167 aaPredicted RBP10.81□□□□□ -0.68
SYF2-202ENST00000354361 PCDHB8Q9UN66 801 aa10.81□□□□□ -0.68
SYF2-202ENST00000354361 PLCG2P16885 1265 aa10.8□□□□□ -0.68
SYF2-202ENST00000354361 GSE1Q14687 1217 aa10.78□□□□□ -0.68
SYF2-202ENST00000354361 IRX5P78411 483 aaPredicted RBP10.77□□□□□ -0.69
SYF2-202ENST00000354361 ZNF467Q7Z7K2 595 aaPredicted RBP10.72□□□□□ -0.69
SYF2-202ENST00000354361 SLAIN1Q8ND83 568 aa10.72□□□□□ -0.69
SYF2-202ENST00000354361 OCEL1Q9H607 264 aa10.71□□□□□ -0.69
SYF2-202ENST00000354361 PCDH10Q9P2E7 1040 aa10.69□□□□□ -0.7
SYF2-202ENST00000354361 CHRM1P11229 460 aaPredicted RBP10.68□□□□□ -0.7
SYF2-202ENST00000354361 IFNLR1Q8IU57 520 aaPredicted RBP10.67□□□□□ -0.7
SYF2-202ENST00000354361 SPOCK2Q92563 424 aa10.65□□□□□ -0.7
SYF2-202ENST00000354361 GOLGA2Q08379 1002 aa10.64□□□□□ -0.71
SYF2-202ENST00000354361 PSEN1P49768 467 aa10.63□□□□□ -0.71
SYF2-202ENST00000354361 MKRN3Q13064 507 aaKnown RBP10.62□□□□□ -0.71
SYF2-202ENST00000354361 PDCD7Q8N8D1 485 aaKnown RBP10.62□□□□□ -0.71
SYF2-202ENST00000354361 CIZ1Q9ULV3 898 aaPredicted RBP10.62□□□□□ -0.71
SYF2-202ENST00000354361 ST18O60284 1047 aa10.6□□□□□ -0.71
SYF2-202ENST00000354361 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.6□□□□□ -0.71
SYF2-202ENST00000354361 PDAP1Q13442 181 aaKnown RBP10.58□□□□□ -0.72
SYF2-202ENST00000354361 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.56□□□□□ -0.721e-7■■■■■ 36.5
SYF2-202ENST00000354361 C3orf67Q6ZVT6 689 aa10.54□□□□□ -0.72
SYF2-202ENST00000354361 CDAN1Q8IWY9 1227 aa10.53□□□□□ -0.72
SYF2-202ENST00000354361 L3MBTL3Q96JM7 780 aaPredicted RBP10.52□□□□□ -0.73
SYF2-202ENST00000354361 CABP2Q9NPB3 220 aa10.51□□□□□ -0.73
SYF2-202ENST00000354361 SNPHO15079 494 aa10.5□□□□□ -0.73
SYF2-202ENST00000354361 ILDR1Q86SU0 546 aaPredicted RBP10.49□□□□□ -0.73
SYF2-202ENST00000354361 TMEM121BQ9BXQ6 578 aaPredicted RBP10.48□□□□□ -0.73
SYF2-202ENST00000354361 DPY19L2Q6NUT2 758 aa10.46□□□□□ -0.73
SYF2-202ENST00000354361 TRIM41Q8WV44 630 aa10.45□□□□□ -0.74
SYF2-202ENST00000354361 MARVELD3Q96A59 401 aa10.44□□□□□ -0.74
SYF2-202ENST00000354361 BOLA1Q9Y3E2 137 aa10.41□□□□□ -0.74
SYF2-202ENST00000354361 G3V3G9 751 aa10.4□□□□□ -0.74
SYF2-202ENST00000354361 EFCAB3Q8N7B9 438 aa10.38□□□□□ -0.75
SYF2-202ENST00000354361 EMP3P54852 163 aa10.36□□□□□ -0.75
SYF2-202ENST00000354361 RNF25Q96BH1 459 aaPredicted RBP10.35□□□□□ -0.75
SYF2-202ENST00000354361 RIOK3O14730 519 aaKnown RBP10.34□□□□□ -0.75
SYF2-202ENST00000354361 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.3□□□□□ -0.76
SYF2-202ENST00000354361 ZFP91Q96JP5 570 aaPredicted RBP10.3□□□□□ -0.76
SYF2-202ENST00000354361 VGFO15240 615 aaPredicted RBP10.28□□□□□ -0.76
SYF2-202ENST00000354361 HOXB3P14651 431 aaPredicted RBP10.28□□□□□ -0.76
SYF2-202ENST00000354361 HS3ST6Q96QI5 342 aa10.28□□□□□ -0.76
SYF2-202ENST00000354361 FAM205CA6NFA0 338 aa10.27□□□□□ -0.77
SYF2-202ENST00000354361 SPNS2Q8IVW8 549 aa10.27□□□□□ -0.77
SYF2-202ENST00000354361 POTEB3A0JP26 581 aa10.26□□□□□ -0.77
SYF2-202ENST00000354361 POTEBQ6S5H4 581 aa10.26□□□□□ -0.77
SYF2-202ENST00000354361 SOX12O15370 315 aa10.25□□□□□ -0.77
SYF2-202ENST00000354361 MMRN1Q13201 1228 aa10.25□□□□□ -0.77
SYF2-202ENST00000354361 MICALL2Q8IY33 904 aa10.25□□□□□ -0.77
SYF2-202ENST00000354361 MS4A4AQ96JQ5 239 aa10.24□□□□□ -0.77
SYF2-202ENST00000354361 ZNF710Q8N1W2 664 aa10.23□□□□□ -0.77
SYF2-202ENST00000354361 PHF8Q9UPP1 1060 aa10.23□□□□□ -0.77
SYF2-202ENST00000354361 DOK7Q18PE1 504 aa10.22□□□□□ -0.77
SYF2-202ENST00000354361 TMEM92Q6UXU6 159 aa10.21□□□□□ -0.77
SYF2-202ENST00000354361 KRTAP3-3Q9BYR6 98 aa10.21□□□□□ -0.77
SYF2-202ENST00000354361 KRTAP3-2Q9BYR7 98 aa10.21□□□□□ -0.77
SYF2-202ENST00000354361 HOXB1P14653 301 aaPredicted RBP10.2□□□□□ -0.78
SYF2-202ENST00000354361 BCL11BQ9C0K0 894 aaPredicted RBP10.17□□□□□ -0.78
SYF2-202ENST00000354361 RIMBP2O15034 1052 aa10.16□□□□□ -0.78
SYF2-202ENST00000354361 TAOK2Q9UL54 1235 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms