RNA–Protein interactions for RNA: ENST00000343516.7

CASKIN1-201, Transcript of CASK interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASKIN1, Length 5,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1-201ENST00000343516 TSPY4P0CV99 314 aa25.67■■□□□ 1.7
CASKIN1-201ENST00000343516 TSPY10P0CW01 314 aa25.67■■□□□ 1.7
CASKIN1-201ENST00000343516 NCLP19338 710 aaKnown RBP25.65■■□□□ 1.7
CASKIN1-201ENST00000343516 PPP4R2Q9NY27 417 aa25.65■■□□□ 1.7
CASKIN1-201ENST00000343516 GOLGA3Q08378 1498 aa25.64■■□□□ 1.69
CASKIN1-201ENST00000343516 STAG3Q9UJ98 1225 aa25.62■■□□□ 1.69
CASKIN1-201ENST00000343516 TNNT2P45379 298 aaPredicted RBP25.61■■□□□ 1.69
CASKIN1-201ENST00000343516 ESF1Q9H501 851 aaKnown RBP25.61■■□□□ 1.69
CASKIN1-201ENST00000343516 CEP162Q5TB80 1403 aa25.61■■□□□ 1.69
CASKIN1-201ENST00000343516 MYO15BQ96JP2 1530 aa25.58■■□□□ 1.69
CASKIN1-201ENST00000343516 SUPT16HQ9Y5B9 1047 aaKnown RBP25.58■■□□□ 1.69
CASKIN1-201ENST00000343516 KDM2AQ9Y2K7 1162 aa25.58■■□□□ 1.69
CASKIN1-201ENST00000343516 HIRIP3Q9BW71 556 aaPredicted RBP25.57■■□□□ 1.68
CASKIN1-201ENST00000343516 RSF1Q96T23 1441 aaPredicted RBP25.57■■□□□ 1.68
CASKIN1-201ENST00000343516 NOP58Q9Y2X3 529 aaKnown RBP25.55■■□□□ 1.68
CASKIN1-201ENST00000343516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.52■■□□□ 1.68
CASKIN1-201ENST00000343516 TNIKQ9UKE5 1360 aa25.48■■□□□ 1.67
CASKIN1-201ENST00000343516 CDCA8Q53HL2 280 aa25.47■■□□□ 1.67
CASKIN1-201ENST00000343516 PTMAP06454 111 aaKnown RBP25.42■■□□□ 1.66
CASKIN1-201ENST00000343516 CFAP53Q96M91 514 aa25.41■■□□□ 1.66
CASKIN1-201ENST00000343516 RRP7BPQ9NSQ0 103 aa25.41■■□□□ 1.66
CASKIN1-201ENST00000343516 CASC1Q6TDU7 716 aa25.39■■□□□ 1.65
CASKIN1-201ENST00000343516 NPM1P06748 294 aaKnown RBP eCLIP25.38■■□□□ 1.65
CASKIN1-201ENST00000343516 TIMELESSQ9UNS1 1208 aa25.37■■□□□ 1.65
CASKIN1-201ENST00000343516 NAP1L5Q96NT1 182 aaPredicted RBP25.35■■□□□ 1.65
CASKIN1-201ENST00000343516 KNSTRNQ9Y448 316 aa25.34■■□□□ 1.65
CASKIN1-201ENST00000343516 CCER2I3L3R5 266 aa25.33■■□□□ 1.65
CASKIN1-201ENST00000343516 CEP164Q9UPV0 1460 aa25.33■■□□□ 1.65
CASKIN1-201ENST00000343516 CDK11BP21127 795 aaKnown RBP25.33■■□□□ 1.65
CASKIN1-201ENST00000343516 LAS1LQ9Y4W2 734 aaKnown RBP25.32■■□□□ 1.64
CASKIN1-201ENST00000343516 DNTTIP2Q5QJE6 756 aaKnown RBP25.31■■□□□ 1.64
CASKIN1-201ENST00000343516 CHMP4BQ9H444 224 aaKnown RBP25.3■■□□□ 1.64
CASKIN1-201ENST00000343516 FTSJ3Q8IY81 847 aaKnown RBP25.29■■□□□ 1.64
CASKIN1-201ENST00000343516 MS4A1P11836 297 aa25.28■■□□□ 1.64
CASKIN1-201ENST00000343516 ZRSR1Q15695 479 aaKnown RBP25.27■■□□□ 1.64
CASKIN1-201ENST00000343516 L1TD1Q5T7N2 865 aaKnown RBP25.26■■□□□ 1.63
CASKIN1-201ENST00000343516 CARD11Q9BXL7 1154 aa25.25■■□□□ 1.63
CASKIN1-201ENST00000343516 WRNQ14191 1432 aaPredicted RBP eCLIP25.22■■□□□ 1.63
CASKIN1-201ENST00000343516 DEKP35659 375 aaKnown RBP25.22■■□□□ 1.63
CASKIN1-201ENST00000343516 RBM19Q9Y4C8 960 aaKnown RBP25.21■■□□□ 1.63
CASKIN1-201ENST00000343516 RTN4Q9NQC3 1192 aaKnown RBP25.18■■□□□ 1.62
CASKIN1-201ENST00000343516 RGS3P49796 1198 aa25.18■■□□□ 1.62
CASKIN1-201ENST00000343516 B4GALNT3Q6L9W6 998 aa25.18■■□□□ 1.62
CASKIN1-201ENST00000343516 PLEKHD1A6NEE1 506 aa25.15■■□□□ 1.62
CASKIN1-201ENST00000343516 KIF27Q86VH2 1401 aa25.15■■□□□ 1.62
CASKIN1-201ENST00000343516 NUDCQ9Y266 331 aa25.14■■□□□ 1.62
CASKIN1-201ENST00000343516 HSP90AB1P08238 724 aaKnown RBP25.14■■□□□ 1.61
CASKIN1-201ENST00000343516 MAPK8IP3Q9UPT6 1336 aa25.12■■□□□ 1.61
CASKIN1-201ENST00000343516 SIN3AQ96ST3 1273 aa25.11■■□□□ 1.61
CASKIN1-201ENST00000343516 RGL3Q3MIN7 710 aa25.11■■□□□ 1.61
CASKIN1-201ENST00000343516 GOLGA6L6A8MZA4 724 aa25.1■■□□□ 1.61
CASKIN1-201ENST00000343516 CCNB3Q8WWL7 1395 aa25.1■■□□□ 1.61
CASKIN1-201ENST00000343516 CHMP7Q8WUX9 453 aaPredicted RBP25.09■■□□□ 1.61
CASKIN1-201ENST00000343516 HSCBQ8IWL3 235 aa25.08■■□□□ 1.61
CASKIN1-201ENST00000343516 CFAP44Q96MT7 982 aa25.08■■□□□ 1.61
CASKIN1-201ENST00000343516 CFDP1Q9UEE9 299 aaPredicted RBP25.07■■□□□ 1.6
CASKIN1-201ENST00000343516 NRDCO43847 1150 aa25.07■■□□□ 1.6
CASKIN1-201ENST00000343516 FRAT1Q92837 279 aaPredicted RBP25.03■■□□□ 1.6
CASKIN1-201ENST00000343516 PNNQ9H307 717 aaKnown RBP25.03■■□□□ 1.6
CASKIN1-201ENST00000343516 PTMSP20962 102 aa25.03■■□□□ 1.6
CASKIN1-201ENST00000343516 CHAF1AQ13111 956 aaPredicted RBP25.03■■□□□ 1.6
CASKIN1-201ENST00000343516 MSNP26038 577 aaKnown RBP25.03■■□□□ 1.6
CASKIN1-201ENST00000343516 FHAD1B1AJZ9 1412 aa25.01■■□□□ 1.59
CASKIN1-201ENST00000343516 PPP1R15AO75807 674 aaPredicted RBP24.97■■□□□ 1.59
CASKIN1-201ENST00000343516 NEUROD2Q15784 382 aa24.97■■□□□ 1.59
CASKIN1-201ENST00000343516 TCERG1O14776 1098 aaKnown RBP24.97■■□□□ 1.59
CASKIN1-201ENST00000343516 SENP3-EIF4A1A0A087X0R7 540 aa24.97■■□□□ 1.59
CASKIN1-201ENST00000343516 RB1CC1Q8TDY2 1594 aa24.96■■□□□ 1.59
CASKIN1-201ENST00000343516 TMF1P82094 1093 aa24.96■■□□□ 1.59
CASKIN1-201ENST00000343516 PLCB2Q00722 1185 aa24.95■■□□□ 1.58
CASKIN1-201ENST00000343516 SETD5Q9C0A6 1442 aa24.92■■□□□ 1.58
CASKIN1-201ENST00000343516 CC2D1BQ5T0F9 858 aaKnown RBP24.9■■□□□ 1.58
CASKIN1-201ENST00000343516 TSHZ2Q9NRE2 1034 aa24.9■■□□□ 1.58
CASKIN1-201ENST00000343516 MCCP23508 829 aa24.88■■□□□ 1.57
CASKIN1-201ENST00000343516 GBP4Q96PP9 640 aa24.87■■□□□ 1.57
CASKIN1-201ENST00000343516 GOLGA6L4A6NEF3 574 aa24.86■■□□□ 1.57
CASKIN1-201ENST00000343516 HAP1P54257 671 aaPredicted RBP24.84■■□□□ 1.57
CASKIN1-201ENST00000343516 VPS8Q8N3P4 1428 aa24.84■■□□□ 1.57
CASKIN1-201ENST00000343516 HSPA5P11021 654 aaKnown RBP24.84■■□□□ 1.57
CASKIN1-201ENST00000343516 TPRNQ4KMQ1 711 aa24.83■■□□□ 1.57
CASKIN1-201ENST00000343516 PLPPR3Q6T4P5 718 aa24.82■■□□□ 1.56
CASKIN1-201ENST00000343516 C14orf37Q86TY3 774 aa24.82■■□□□ 1.56
CASKIN1-201ENST00000343516 BAZ1BQ9UIG0 1483 aaKnown RBP24.81■■□□□ 1.56
CASKIN1-201ENST00000343516 IPO9Q96P70 1041 aaKnown RBP24.81■■□□□ 1.56
CASKIN1-201ENST00000343516 KTN1Q86UP2 1357 aaKnown RBP24.81■■□□□ 1.56
CASKIN1-201ENST00000343516 KCNH8Q96L42 1107 aa24.81■■□□□ 1.56
CASKIN1-201ENST00000343516 RCAN3Q9UKA8 241 aa24.8■■□□□ 1.56
CASKIN1-201ENST00000343516 FGD1P98174 961 aa24.79■■□□□ 1.56
CASKIN1-201ENST00000343516 RALBP1Q15311 655 aa24.79■■□□□ 1.56
CASKIN1-201ENST00000343516 ARID4BQ4LE39 1312 aaPredicted RBP24.79■■□□□ 1.56
CASKIN1-201ENST00000343516 KCNJ4P48050 445 aa24.78■■□□□ 1.56
CASKIN1-201ENST00000343516 ZBTB7CA1YPR0 619 aa24.77■■□□□ 1.56
CASKIN1-201ENST00000343516 U2SURPO15042 1029 aaKnown RBP24.76■■□□□ 1.55
CASKIN1-201ENST00000343516 OS9Q13438 667 aaPredicted RBP24.76■■□□□ 1.55
CASKIN1-201ENST00000343516 IPO8O15397 1037 aaKnown RBP24.75■■□□□ 1.55
CASKIN1-201ENST00000343516 DCAF11Q8TEB1 546 aa24.75■■□□□ 1.55
CASKIN1-201ENST00000343516 POGKQ9P215 609 aa24.75■■□□□ 1.55
CASKIN1-201ENST00000343516 RWDD1Q9H446 243 aaPredicted RBP24.74■■□□□ 1.55
CASKIN1-201ENST00000343516 KIAA2012Q0VF49 1180 aa24.73■■□□□ 1.55
CASKIN1-201ENST00000343516 USP35Q9P2H5 1018 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms