RNA–Protein interactions for RNA: ENST00000339626.5

RLIMP1-201, Transcript of ring finger protein, LIM domain interacting pseudogene 1, humanhuman

BASIC

Gene RLIMP1, Length 1,680 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMP1-201ENST00000339626 MIER1Q8N108 512 aa8.24□□□□□ -1.09
RLIMP1-201ENST00000339626 ZNF579Q8NAF0 562 aaKnown RBP8.24□□□□□ -1.09
RLIMP1-201ENST00000339626 DCBLD2Q96PD2 775 aa8.21□□□□□ -1.09
RLIMP1-201ENST00000339626 PLCD3Q8N3E9 789 aa8.21□□□□□ -1.1
RLIMP1-201ENST00000339626 MNX1P50219 401 aaPredicted RBP8.2□□□□□ -1.1
RLIMP1-201ENST00000339626 CC2D2AQ9P2K1 1620 aa8.18□□□□□ -1.1
RLIMP1-201ENST00000339626 CECR2Q9BXF3 1484 aa8.17□□□□□ -1.1
RLIMP1-201ENST00000339626 SHROOM4Q9ULL8 1493 aa8.17□□□□□ -1.1
RLIMP1-201ENST00000339626 ZBTB47Q9UFB7 747 aaPredicted RBP8.17□□□□□ -1.1
RLIMP1-201ENST00000339626 EIF4G1Q04637 1599 aaKnown RBP8.16□□□□□ -1.1
RLIMP1-201ENST00000339626 PLSCR2Q9NRY7 297 aa8.15□□□□□ -1.1
RLIMP1-201ENST00000339626 PHF12Q96QT6 1004 aa8.14□□□□□ -1.11
RLIMP1-201ENST00000339626 TSPYL2Q9H2G4 693 aaPredicted RBP8.14□□□□□ -1.11
RLIMP1-201ENST00000339626 FBXO3Q9UK99 471 aa8.14□□□□□ -1.11
RLIMP1-201ENST00000339626 GALR2O43603 387 aaPredicted RBP8.11□□□□□ -1.11
RLIMP1-201ENST00000339626 LHX8Q68G74 356 aa8.1□□□□□ -1.11
RLIMP1-201ENST00000339626 POTEIP0CG38 1075 aa8.08□□□□□ -1.12
RLIMP1-201ENST00000339626 MS4A3Q96HJ5 214 aa8.04□□□□□ -1.12
RLIMP1-201ENST00000339626 CCDC61Q9Y6R9 512 aa8.04□□□□□ -1.12
RLIMP1-201ENST00000339626 RASEFQ8IZ41 740 aa8.03□□□□□ -1.12
RLIMP1-201ENST00000339626 FAM212AQ96EL1 285 aa8.02□□□□□ -1.13
RLIMP1-201ENST00000339626 KIF12Q96FN5 646 aa8.01□□□□□ -1.13
RLIMP1-201ENST00000339626 KLHL34Q8N239 644 aa7.99□□□□□ -1.13
RLIMP1-201ENST00000339626 NUBP1P53384 320 aa7.98□□□□□ -1.13
RLIMP1-201ENST00000339626 MAP3K13O43283 966 aa7.96□□□□□ -1.13
RLIMP1-201ENST00000339626 DCAF8Q5TAQ9 597 aa7.96□□□□□ -1.13
RLIMP1-201ENST00000339626 SLC39A7Q92504 469 aa7.96□□□□□ -1.13
RLIMP1-201ENST00000339626 ATMINO43313 823 aaPredicted RBP7.95□□□□□ -1.14
RLIMP1-201ENST00000339626 VASPP50552 380 aaPredicted RBP7.95□□□□□ -1.14
RLIMP1-201ENST00000339626 ASTLQ6HA08 431 aaPredicted RBP7.95□□□□□ -1.14
RLIMP1-201ENST00000339626 C7P10643 843 aa7.94□□□□□ -1.14
RLIMP1-201ENST00000339626 SGIP1Q9BQI5 828 aa7.94□□□□□ -1.14
RLIMP1-201ENST00000339626 PCDHB13Q9Y5F0 798 aa7.94□□□□□ -1.14
RLIMP1-201ENST00000339626 TIE1P35590 1138 aa7.92□□□□□ -1.14
RLIMP1-201ENST00000339626 METRNQ9UJH8 293 aa7.92□□□□□ -1.14
RLIMP1-201ENST00000339626 NCAPD3P42695 1498 aa7.91□□□□□ -1.14
RLIMP1-201ENST00000339626 ATAD2BQ9ULI0 1458 aa7.91□□□□□ -1.14
RLIMP1-201ENST00000339626 PELP1Q8IZL8 1130 aaKnown RBP7.91□□□□□ -1.14
RLIMP1-201ENST00000339626 ATN1P54259 1190 aaPredicted RBP7.89□□□□□ -1.15
RLIMP1-201ENST00000339626 GSE1Q14687 1217 aa7.89□□□□□ -1.15
RLIMP1-201ENST00000339626 BMP2KQ9NSY1 1161 aaPredicted RBP7.89□□□□□ -1.15
RLIMP1-201ENST00000339626 SMARCA4P51532 1647 aa7.88□□□□□ -1.15
RLIMP1-201ENST00000339626 MAMSTRQ6ZN01 415 aa7.86□□□□□ -1.15
RLIMP1-201ENST00000339626 SEC24BO95487 1268 aa7.86□□□□□ -1.15
RLIMP1-201ENST00000339626 TRPC6Q9Y210 931 aa7.86□□□□□ -1.15
RLIMP1-201ENST00000339626 TTLL13PA6NNM8 815 aa7.85□□□□□ -1.15
RLIMP1-201ENST00000339626 PYGBP11216 843 aa7.85□□□□□ -1.15
RLIMP1-201ENST00000339626 SMARCA2P51531 1590 aa7.84□□□□□ -1.15
RLIMP1-201ENST00000339626 MROH2BQ7Z745 1585 aa7.84□□□□□ -1.15
RLIMP1-201ENST00000339626 BAZ1AQ9NRL2 1556 aaPredicted RBP7.84□□□□□ -1.15
RLIMP1-201ENST00000339626 IFNL1Q8IU54 200 aa7.84□□□□□ -1.15
RLIMP1-201ENST00000339626 NESP48681 1621 aa7.84□□□□□ -1.16
RLIMP1-201ENST00000339626 SPOCK2Q92563 424 aa7.83□□□□□ -1.16
RLIMP1-201ENST00000339626 TMEM106CQ9BVX2 250 aa7.83□□□□□ -1.16
RLIMP1-201ENST00000339626 ERCC6Q03468 1493 aa7.83□□□□□ -1.16
RLIMP1-201ENST00000339626 BAZ1BQ9UIG0 1483 aaKnown RBP7.83□□□□□ -1.16
RLIMP1-201ENST00000339626 HMGXB3Q12766 1538 aa7.82□□□□□ -1.16
RLIMP1-201ENST00000339626 SCUBE2Q9NQ36 999 aa7.82□□□□□ -1.16
RLIMP1-201ENST00000339626 TRIM35Q9UPQ4 493 aa7.82□□□□□ -1.16
RLIMP1-201ENST00000339626 POTEB2H3BUK9 544 aa7.81□□□□□ -1.16
RLIMP1-201ENST00000339626 IER5LQ5T953 404 aa7.81□□□□□ -1.16
RLIMP1-201ENST00000339626 OTUD5Q96G74 571 aa7.8□□□□□ -1.16
RLIMP1-201ENST00000339626 ZNF467Q7Z7K2 595 aaPredicted RBP7.79□□□□□ -1.16
RLIMP1-201ENST00000339626 CIZ1Q9ULV3 898 aaPredicted RBP7.79□□□□□ -1.16
RLIMP1-201ENST00000339626 PEG3Q9GZU2 1588 aa7.78□□□□□ -1.16
RLIMP1-201ENST00000339626 DNAJC5Q9H3Z4 198 aa7.77□□□□□ -1.17
RLIMP1-201ENST00000339626 PCDHB8Q9UN66 801 aa7.77□□□□□ -1.17
RLIMP1-201ENST00000339626 PLCG2P16885 1265 aa7.76□□□□□ -1.17
RLIMP1-201ENST00000339626 IFNLR1Q8IU57 520 aaPredicted RBP7.76□□□□□ -1.17
RLIMP1-201ENST00000339626 CHRM1P11229 460 aaPredicted RBP7.76□□□□□ -1.17
RLIMP1-201ENST00000339626 GOLGA2Q08379 1002 aa7.75□□□□□ -1.17
RLIMP1-201ENST00000339626 WIZO95785 1651 aa7.75□□□□□ -1.17
RLIMP1-201ENST00000339626 CUX2O14529 1486 aa7.74□□□□□ -1.17
RLIMP1-201ENST00000339626 COLQQ9Y215 455 aaPredicted RBP7.73□□□□□ -1.17
RLIMP1-201ENST00000339626 POTEFA5A3E0 1075 aa7.71□□□□□ -1.18
RLIMP1-201ENST00000339626 TRIM41Q8WV44 630 aa7.71□□□□□ -1.18
RLIMP1-201ENST00000339626 POTEJP0CG39 1038 aa7.7□□□□□ -1.18
RLIMP1-201ENST00000339626 MKRN3Q13064 507 aaKnown RBP7.7□□□□□ -1.18
RLIMP1-201ENST00000339626 LAMC3Q9Y6N6 1575 aa7.7□□□□□ -1.18
RLIMP1-201ENST00000339626 RSF1Q96T23 1441 aaPredicted RBP7.7□□□□□ -1.18
RLIMP1-201ENST00000339626 CADPSQ9ULU8 1353 aa7.69□□□□□ -1.18
RLIMP1-201ENST00000339626 PSEN1P49768 467 aa7.69□□□□□ -1.18
RLIMP1-201ENST00000339626 OCEL1Q9H607 264 aa7.69□□□□□ -1.18
RLIMP1-201ENST00000339626 PDS5BQ9NTI5 1447 aa7.68□□□□□ -1.18
RLIMP1-201ENST00000339626 PDAP1Q13442 181 aaKnown RBP7.68□□□□□ -1.18
RLIMP1-201ENST00000339626 THOC2Q8NI27 1593 aaKnown RBP7.68□□□□□ -1.18
RLIMP1-201ENST00000339626 KIF21AQ7Z4S6 1674 aa7.68□□□□□ -1.18
RLIMP1-201ENST00000339626 IRX5P78411 483 aaPredicted RBP7.67□□□□□ -1.18
RLIMP1-201ENST00000339626 FAM163AQ96GL9 167 aaPredicted RBP7.64□□□□□ -1.19
RLIMP1-201ENST00000339626 SLAIN1Q8ND83 568 aa7.63□□□□□ -1.19
RLIMP1-201ENST00000339626 L3MBTL3Q96JM7 780 aaPredicted RBP7.62□□□□□ -1.19
RLIMP1-201ENST00000339626 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.62□□□□□ -1.19
RLIMP1-201ENST00000339626 MRC2Q9UBG0 1479 aa7.61□□□□□ -1.19
RLIMP1-201ENST00000339626 POTEMA6NI47 508 aa7.61□□□□□ -1.19
RLIMP1-201ENST00000339626 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.61□□□□□ -1.19
RLIMP1-201ENST00000339626 TOP2AP11388 1531 aaKnown RBP7.61□□□□□ -1.19
RLIMP1-201ENST00000339626 FANCD2Q9BXW9 1451 aa7.61□□□□□ -1.19
RLIMP1-201ENST00000339626 G3V3G9 751 aa7.6□□□□□ -1.19
RLIMP1-201ENST00000339626 POTEGQ6S5H5 508 aa7.6□□□□□ -1.19
RLIMP1-201ENST00000339626 CFTRP13569 1480 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 701.7 ms