RNA–Protein interactions for RNA: ENST00000338145.7

UBE2D3-202, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-202ENST00000338145 CEP164Q9UPV0 1460 aa17.98■□□□□ 0.47
UBE2D3-202ENST00000338145 FANCD2Q9BXW9 1451 aa17.91■□□□□ 0.46
UBE2D3-202ENST00000338145 CFTRP13569 1480 aa17.85■□□□□ 0.45
UBE2D3-202ENST00000338145 REM2Q8IYK8 340 aaPredicted RBP17.84■□□□□ 0.45
UBE2D3-202ENST00000338145 WIZO95785 1651 aa17.83■□□□□ 0.45
UBE2D3-202ENST00000338145 SPDYE1Q8NFV5 336 aaPredicted RBP17.79■□□□□ 0.44
UBE2D3-202ENST00000338145 STAG3Q9UJ98 1225 aa17.79■□□□□ 0.44
UBE2D3-202ENST00000338145 FBXO3Q9UK99 471 aa17.79■□□□□ 0.44
UBE2D3-202ENST00000338145 URB2Q14146 1524 aaKnown RBP17.76■□□□□ 0.43
UBE2D3-202ENST00000338145 RIMBP3CA6NJZ7 1639 aa17.73■□□□□ 0.43
UBE2D3-202ENST00000338145 RIMBP3BA6NNM3 1639 aa17.73■□□□□ 0.43
UBE2D3-202ENST00000338145 RIMBP3Q9UFD9 1639 aa17.73■□□□□ 0.43
UBE2D3-202ENST00000338145 IFT140Q96RY7 1462 aa17.66■□□□□ 0.42
UBE2D3-202ENST00000338145 ARHGEF11O15085 1522 aa17.66■□□□□ 0.42
UBE2D3-202ENST00000338145 TOP2AP11388 1531 aaKnown RBP17.64■□□□□ 0.41
UBE2D3-202ENST00000338145 PITPNM1O00562 1244 aa17.62■□□□□ 0.41
UBE2D3-202ENST00000338145 RSF1Q96T23 1441 aaPredicted RBP17.62■□□□□ 0.41
UBE2D3-202ENST00000338145 ZNF608Q9ULD9 1512 aaPredicted RBP17.59■□□□□ 0.41
UBE2D3-202ENST00000338145 CYB5RLQ6IPT4 315 aa17.59■□□□□ 0.41
UBE2D3-202ENST00000338145 CLEC11AQ9Y240 323 aa17.57■□□□□ 0.4
UBE2D3-202ENST00000338145 PRDM2Q13029 1718 aa17.55■□□□□ 0.4
UBE2D3-202ENST00000338145 ABCC8Q09428 1581 aa17.54■□□□□ 0.4
UBE2D3-202ENST00000338145 TOPBP1Q92547 1522 aa17.52■□□□□ 0.39
UBE2D3-202ENST00000338145 PRR29P0C7W0 189 aa17.49■□□□□ 0.39
UBE2D3-202ENST00000338145 CHRDL2Q6WN34 429 aa17.47■□□□□ 0.39
UBE2D3-202ENST00000338145 EIF4G3O43432 1585 aaKnown RBP17.47■□□□□ 0.39
UBE2D3-202ENST00000338145 VASPP50552 380 aaPredicted RBP17.46■□□□□ 0.39
UBE2D3-202ENST00000338145 CCDC88BA6NC98 1476 aa17.44■□□□□ 0.38
UBE2D3-202ENST00000338145 ARAP1Q96P48 1450 aa17.44■□□□□ 0.38
UBE2D3-202ENST00000338145 DNMBPQ6XZF7 1577 aa17.41■□□□□ 0.38
UBE2D3-202ENST00000338145 AQRO60306 1485 aaKnown RBP eCLIP17.41■□□□□ 0.382e-7■■■■□ 25.1
UBE2D3-202ENST00000338145 CHD1O14646 1710 aa17.39■□□□□ 0.37
UBE2D3-202ENST00000338145 TARBP1Q13395 1621 aaKnown RBP17.36■□□□□ 0.37
UBE2D3-202ENST00000338145 PLEKHG5O94827 1062 aa17.34■□□□□ 0.37
UBE2D3-202ENST00000338145 FXR2P51116 673 aaKnown RBP eCLIP17.34■□□□□ 0.37
UBE2D3-202ENST00000338145 POLA1P09884 1462 aaPredicted RBP17.31■□□□□ 0.36
UBE2D3-202ENST00000338145 MIER1Q8N108 512 aa17.3■□□□□ 0.36
UBE2D3-202ENST00000338145 PLCD3Q8N3E9 789 aa17.3■□□□□ 0.36
UBE2D3-202ENST00000338145 CREBZFQ9NS37 354 aa17.27■□□□□ 0.36
UBE2D3-202ENST00000338145 CHMP7Q8WUX9 453 aaPredicted RBP17.26■□□□□ 0.35
UBE2D3-202ENST00000338145 ZBTB47Q9UFB7 747 aaPredicted RBP17.26■□□□□ 0.35
UBE2D3-202ENST00000338145 SOGA1O94964 1423 aa17.26■□□□□ 0.35
UBE2D3-202ENST00000338145 WDR97A6NE52 1622 aa17.25■□□□□ 0.35
UBE2D3-202ENST00000338145 CLASP1Q7Z460 1538 aa17.24■□□□□ 0.35
UBE2D3-202ENST00000338145 TDRD9Q8NDG6 1382 aaKnown RBP17.24■□□□□ 0.35
UBE2D3-202ENST00000338145 PIP4P2Q8N4L2 257 aa17.23■□□□□ 0.35
UBE2D3-202ENST00000338145 RAD54L2Q9Y4B4 1467 aa17.23■□□□□ 0.35
UBE2D3-202ENST00000338145 SYNJ1O43426 1573 aa17.23■□□□□ 0.35
UBE2D3-202ENST00000338145 SNAPC4Q5SXM2 1469 aa17.22■□□□□ 0.35
UBE2D3-202ENST00000338145 MAGI1Q96QZ7 1491 aaPredicted RBP17.21■□□□□ 0.35
UBE2D3-202ENST00000338145 IFNLR1Q8IU57 520 aaPredicted RBP17.18■□□□□ 0.34
UBE2D3-202ENST00000338145 PRKAR2AP13861 404 aaKnown RBP17.17■□□□□ 0.34
UBE2D3-202ENST00000338145 GRIN2BQ13224 1484 aa17.16■□□□□ 0.34
UBE2D3-202ENST00000338145 SYNJ2O15056 1496 aa17.15■□□□□ 0.34
UBE2D3-202ENST00000338145 FGD5Q6ZNL6 1462 aa17.13■□□□□ 0.33
UBE2D3-202ENST00000338145 MNX1P50219 401 aaPredicted RBP17.11■□□□□ 0.33
UBE2D3-202ENST00000338145 GAPVD1Q14C86 1478 aa17.11■□□□□ 0.33
UBE2D3-202ENST00000338145 CHADLQ6NUI6 762 aa17.1■□□□□ 0.33
UBE2D3-202ENST00000338145 KLHL34Q8N239 644 aa17.09■□□□□ 0.33
UBE2D3-202ENST00000338145 NPM1P06748 294 aaKnown RBP eCLIP17.06■□□□□ 0.32
UBE2D3-202ENST00000338145 FARP1Q9Y4F1 1045 aaPredicted RBP17.06■□□□□ 0.32
UBE2D3-202ENST00000338145 CUX1P39880 1505 aa17.03■□□□□ 0.32
UBE2D3-202ENST00000338145 SPOCK2Q92563 424 aa17.03■□□□□ 0.32
UBE2D3-202ENST00000338145 PBRM1Q86U86 1689 aa16.97■□□□□ 0.31
UBE2D3-202ENST00000338145 ABCA10Q8WWZ4 1543 aa16.95■□□□□ 0.3
UBE2D3-202ENST00000338145 NUBP1P53384 320 aa16.91■□□□□ 0.3
UBE2D3-202ENST00000338145 ABCA5Q8WWZ7 1642 aa16.91■□□□□ 0.3
UBE2D3-202ENST00000338145 GRIN2AQ12879 1464 aa16.91■□□□□ 0.3
UBE2D3-202ENST00000338145 NUP160Q12769 1436 aa16.88■□□□□ 0.29
UBE2D3-202ENST00000338145 ERCC6L2Q5T890 1561 aa16.88■□□□□ 0.29
UBE2D3-202ENST00000338145 CEP170Q5SW79 1584 aa16.87■□□□□ 0.29
UBE2D3-202ENST00000338145 AMER1Q5JTC6 1135 aaPredicted RBP16.87■□□□□ 0.29
UBE2D3-202ENST00000338145 POTEHQ6S545 545 aa16.86■□□□□ 0.29
UBE2D3-202ENST00000338145 WRNQ14191 1432 aaPredicted RBP eCLIP16.83■□□□□ 0.285e-6■■■■■ 29.2
UBE2D3-202ENST00000338145 SHROOM2Q13796 1616 aa16.82■□□□□ 0.28
UBE2D3-202ENST00000338145 FHAD1B1AJZ9 1412 aa16.82■□□□□ 0.28
UBE2D3-202ENST00000338145 ADAMTS12P58397 1594 aa16.81■□□□□ 0.28
UBE2D3-202ENST00000338145 FAM212AQ96EL1 285 aa16.81■□□□□ 0.28
UBE2D3-202ENST00000338145 GSE1Q14687 1217 aa16.8■□□□□ 0.28
UBE2D3-202ENST00000338145 KIF13AQ9H1H9 1805 aa16.78■□□□□ 0.28
UBE2D3-202ENST00000338145 RASEFQ8IZ41 740 aa16.78■□□□□ 0.28
UBE2D3-202ENST00000338145 C19orf67A6NJJ6 358 aa16.75■□□□□ 0.27
UBE2D3-202ENST00000338145 PAK3O75914 559 aaPredicted RBP16.75■□□□□ 0.27
UBE2D3-202ENST00000338145 FAM69CQ0P6D2 419 aa16.75■□□□□ 0.27
UBE2D3-202ENST00000338145 JPH4Q96JJ6 628 aa16.75■□□□□ 0.27
UBE2D3-202ENST00000338145 PRG4Q92954 1404 aaPredicted RBP16.75■□□□□ 0.27
UBE2D3-202ENST00000338145 ABCC10Q5T3U5 1492 aa16.74■□□□□ 0.27
UBE2D3-202ENST00000338145 ERICH3Q5RHP9 1530 aa16.74■□□□□ 0.27
UBE2D3-202ENST00000338145 CD44P16070 742 aaKnown RBP16.7■□□□□ 0.26
UBE2D3-202ENST00000338145 DCAF8Q5TAQ9 597 aa16.69■□□□□ 0.26
UBE2D3-202ENST00000338145 MAPKBP1O60336 1514 aa16.69■□□□□ 0.26
UBE2D3-202ENST00000338145 TOP2BQ02880 1626 aa16.67■□□□□ 0.26
UBE2D3-202ENST00000338145 CIZ1Q9ULV3 898 aaPredicted RBP16.67■□□□□ 0.26
UBE2D3-202ENST00000338145 KDM4FA0A1W2PPD8 638 aa16.66■□□□□ 0.26
UBE2D3-202ENST00000338145 RTN4Q9NQC3 1192 aaKnown RBP16.66■□□□□ 0.26
UBE2D3-202ENST00000338145 BIVM-ERCC5R4GMW8 1640 aa16.66■□□□□ 0.26
UBE2D3-202ENST00000338145 HAX1O00165 279 aa16.63■□□□□ 0.25
UBE2D3-202ENST00000338145 PKD2Q13563 968 aa16.63■□□□□ 0.25
UBE2D3-202ENST00000338145 TSPYL2Q9H2G4 693 aaPredicted RBP16.63■□□□□ 0.25
UBE2D3-202ENST00000338145 DIP2BQ9P265 1576 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms