RNA–Protein interactions for RNA: ENST00000334256.8

KPNA4-201, Transcript of karyopherin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA4, Length 8,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-201ENST00000334256 PDE4CQ08493 712 aa17.15■□□□□ 0.34
KPNA4-201ENST00000334256 FKBP8Q14318 412 aa17.08■□□□□ 0.32
KPNA4-201ENST00000334256 PPM1GO15355 546 aaPredicted RBP17.07■□□□□ 0.32
KPNA4-201ENST00000334256 RTN4Q9NQC3 1192 aaKnown RBP17.06■□□□□ 0.32
KPNA4-201ENST00000334256 CNKSR2Q8WXI2 1034 aa17.05■□□□□ 0.32
KPNA4-201ENST00000334256 NAP1L2Q9ULW6 460 aaPredicted RBP17.05■□□□□ 0.32
KPNA4-201ENST00000334256 WWC1Q8IX03 1113 aa17.01■□□□□ 0.31
KPNA4-201ENST00000334256 ANP32CO43423 234 aa17.01■□□□□ 0.31
KPNA4-201ENST00000334256 G3V3G9 751 aa16.99■□□□□ 0.31
KPNA4-201ENST00000334256 DCAF8Q5TAQ9 597 aa16.99■□□□□ 0.31
KPNA4-201ENST00000334256 TMX4Q9H1E5 349 aaPredicted RBP16.98■□□□□ 0.31
KPNA4-201ENST00000334256 MSH5O43196 834 aa16.96■□□□□ 0.31
KPNA4-201ENST00000334256 SOX12O15370 315 aa16.96■□□□□ 0.31
KPNA4-201ENST00000334256 DNTTIP2Q5QJE6 756 aaKnown RBP16.96■□□□□ 0.3
KPNA4-201ENST00000334256 ZNF330Q9Y3S2 320 aaPredicted RBP16.95■□□□□ 0.3
KPNA4-201ENST00000334256 NCLP19338 710 aaKnown RBP16.95■□□□□ 0.3
KPNA4-201ENST00000334256 ZRSR1Q15695 479 aaKnown RBP16.93■□□□□ 0.3
KPNA4-201ENST00000334256 UPF2Q9HAU5 1272 aaKnown RBP16.93■□□□□ 0.3
KPNA4-201ENST00000334256 ARID3AQ99856 593 aa16.93■□□□□ 0.3
KPNA4-201ENST00000334256 LOC105371045A0A1W2PR82 267 aa16.92■□□□□ 0.3
KPNA4-201ENST00000334256 MLECQ14165 292 aa16.92■□□□□ 0.3
KPNA4-201ENST00000334256 KDM2AQ9Y2K7 1162 aa16.91■□□□□ 0.3
KPNA4-201ENST00000334256 TNNT2P45379 298 aaPredicted RBP16.91■□□□□ 0.3
KPNA4-201ENST00000334256 KCNH8Q96L42 1107 aa16.9■□□□□ 0.3
KPNA4-201ENST00000334256 LAS1LQ9Y4W2 734 aaKnown RBP16.89■□□□□ 0.29
KPNA4-201ENST00000334256 MYH16Q9H6N6 1097 aa16.88■□□□□ 0.29
KPNA4-201ENST00000334256 PLCB2Q00722 1185 aa16.88■□□□□ 0.29
KPNA4-201ENST00000334256 TMC1Q8TDI8 760 aa16.87■□□□□ 0.29
KPNA4-201ENST00000334256 WDR70Q9NW82 654 aa16.87■□□□□ 0.29
KPNA4-201ENST00000334256 SENP3-EIF4A1A0A087X0R7 540 aa16.84■□□□□ 0.29
KPNA4-201ENST00000334256 PTMAP06454 111 aaKnown RBP16.84■□□□□ 0.29
KPNA4-201ENST00000334256 TRIM44Q96DX7 344 aaPredicted RBP16.83■□□□□ 0.28
KPNA4-201ENST00000334256 IRX6P78412 446 aaPredicted RBP16.82■□□□□ 0.28
KPNA4-201ENST00000334256 NAP1L5Q96NT1 182 aaPredicted RBP16.81■□□□□ 0.28
KPNA4-201ENST00000334256 MEX3CQ5U5Q3 659 aaKnown RBP16.8■□□□□ 0.28
KPNA4-201ENST00000334256 ERICH6BQ5W0A0 696 aa16.79■□□□□ 0.28
KPNA4-201ENST00000334256 FGD1P98174 961 aa16.79■□□□□ 0.28
KPNA4-201ENST00000334256 OS9Q13438 667 aaPredicted RBP16.75■□□□□ 0.27
KPNA4-201ENST00000334256 CWC22Q9HCG8 908 aaKnown RBP16.75■□□□□ 0.27
KPNA4-201ENST00000334256 PPP1R1BQ9UD71 204 aaPredicted RBP16.74■□□□□ 0.27
KPNA4-201ENST00000334256 FAM9BQ8IZU0 186 aa16.74■□□□□ 0.27
KPNA4-201ENST00000334256 WDR43Q15061 677 aaKnown RBP eCLIP16.73■□□□□ 0.274e-10■■■■□ 26
KPNA4-201ENST00000334256 VPS53Q5VIR6 699 aa16.71■□□□□ 0.27
KPNA4-201ENST00000334256 NEUROD2Q15784 382 aa16.71■□□□□ 0.27
KPNA4-201ENST00000334256 CFAP44Q96MT7 982 aa16.68■□□□□ 0.26
KPNA4-201ENST00000334256 VSIG10Q8N0Z9 540 aa16.68■□□□□ 0.26
KPNA4-201ENST00000334256 PAK3O75914 559 aaPredicted RBP16.67■□□□□ 0.26
KPNA4-201ENST00000334256 KCNJ4P48050 445 aa16.65■□□□□ 0.26
KPNA4-201ENST00000334256 CSB-PGBD3P0DP91 1061 aa16.64■□□□□ 0.25
KPNA4-201ENST00000334256 CHIC2Q9UKJ5 165 aa16.63■□□□□ 0.25
KPNA4-201ENST00000334256 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.63■□□□□ 0.25
KPNA4-201ENST00000334256 RAD21O60216 631 aa16.61■□□□□ 0.25
KPNA4-201ENST00000334256 SAMD1Q6SPF0 538 aaPredicted RBP16.6■□□□□ 0.25
KPNA4-201ENST00000334256 NOC3LQ8WTT2 800 aaKnown RBP16.6■□□□□ 0.25
KPNA4-201ENST00000334256 CCDC136Q96JN2 1154 aa16.58■□□□□ 0.24
KPNA4-201ENST00000334256 HNRNPUQ00839 825 aaKnown RBP eCLIP16.57■□□□□ 0.24
KPNA4-201ENST00000334256 PPM1FP49593 454 aaPredicted RBP16.54■□□□□ 0.24
KPNA4-201ENST00000334256 EIF4G2P78344 907 aaKnown RBP eCLIP16.54■□□□□ 0.243e-7■■□□□ 14
KPNA4-201ENST00000334256 GTF2E1P29083 439 aaPredicted RBP16.53■□□□□ 0.24
KPNA4-201ENST00000334256 FBXW7Q969H0 707 aa16.53■□□□□ 0.24
KPNA4-201ENST00000334256 PATL2C9JE40 543 aaKnown RBP16.53■□□□□ 0.24
KPNA4-201ENST00000334256 RGL3Q3MIN7 710 aa16.53■□□□□ 0.24
KPNA4-201ENST00000334256 GNL2Q13823 731 aaKnown RBP16.52■□□□□ 0.24
KPNA4-201ENST00000334256 CHMP7Q8WUX9 453 aaPredicted RBP16.52■□□□□ 0.23
KPNA4-201ENST00000334256 FRAT2O75474 233 aaPredicted RBP16.52■□□□□ 0.23
KPNA4-201ENST00000334256 POGKQ9P215 609 aa16.51■□□□□ 0.23
KPNA4-201ENST00000334256 CREBRFQ8IUR6 639 aa16.5■□□□□ 0.23
KPNA4-201ENST00000334256 CHMP3Q9Y3E7 222 aa16.5■□□□□ 0.23
KPNA4-201ENST00000334256 ABCC9O60706 1549 aa16.5■□□□□ 0.23
KPNA4-201ENST00000334256 PNNQ9H307 717 aaKnown RBP16.49■□□□□ 0.23
KPNA4-201ENST00000334256 CTDP1Q9Y5B0 961 aaPredicted RBP16.48■□□□□ 0.23
KPNA4-201ENST00000334256 KIAA2012Q0VF49 1180 aa16.46■□□□□ 0.23
KPNA4-201ENST00000334256 SPRYD3Q8NCJ5 442 aa16.44■□□□□ 0.22
KPNA4-201ENST00000334256 A0A0U1RQG5 324 aaPredicted RBP16.44■□□□□ 0.22
KPNA4-201ENST00000334256 CASC1Q6TDU7 716 aa16.44■□□□□ 0.22
KPNA4-201ENST00000334256 SAFB2Q14151 953 aaKnown RBP eCLIP16.43■□□□□ 0.229e-8■■■■□ 23.7
KPNA4-201ENST00000334256 TAF7LQ5H9L4 462 aa16.43■□□□□ 0.22
KPNA4-201ENST00000334256 IBSPP21815 317 aaPredicted RBP16.42■□□□□ 0.22
KPNA4-201ENST00000334256 TCEAL9Q9UHQ7 104 aa16.41■□□□□ 0.22
KPNA4-201ENST00000334256 TNNT3P45378 269 aaPredicted RBP16.41■□□□□ 0.22
KPNA4-201ENST00000334256 DRC7Q8IY82 874 aa16.4■□□□□ 0.22
KPNA4-201ENST00000334256 TSPY4P0CV99 314 aa16.4■□□□□ 0.22
KPNA4-201ENST00000334256 TSPY10P0CW01 314 aa16.4■□□□□ 0.22
KPNA4-201ENST00000334256 PAF1Q8N7H5 531 aa16.4■□□□□ 0.22
KPNA4-201ENST00000334256 MARCH6O60337 910 aa16.4■□□□□ 0.22
KPNA4-201ENST00000334256 GOLGA6L22H0YM25 854 aa16.39■□□□□ 0.21
KPNA4-201ENST00000334256 ACIN1Q9UKV3 1341 aaKnown RBP16.38■□□□□ 0.21
KPNA4-201ENST00000334256 ANP32EQ9BTT0 268 aa16.38■□□□□ 0.21
KPNA4-201ENST00000334256 EVA1CP58658 441 aa16.37■□□□□ 0.21
KPNA4-201ENST00000334256 PAXIP1Q6ZW49 1069 aaPredicted RBP16.37■□□□□ 0.21
KPNA4-201ENST00000334256 FTSJ3Q8IY81 847 aaKnown RBP16.37■□□□□ 0.21
KPNA4-201ENST00000334256 AK7Q96M32 723 aa16.36■□□□□ 0.21
KPNA4-201ENST00000334256 CCAR1Q8IX12 1150 aaKnown RBP16.36■□□□□ 0.21
KPNA4-201ENST00000334256 TRIM34Q9BYJ4 488 aa16.36■□□□□ 0.21
KPNA4-201ENST00000334256 U2SURPO15042 1029 aaKnown RBP16.35■□□□□ 0.21
KPNA4-201ENST00000334256 CEP89Q96ST8 783 aa16.34■□□□□ 0.21
KPNA4-201ENST00000334256 GORABQ5T7V8 394 aa16.34■□□□□ 0.21
KPNA4-201ENST00000334256 RASSF8Q8NHQ8 419 aa16.33■□□□□ 0.2
KPNA4-201ENST00000334256 SF3B2Q13435 895 aaKnown RBP16.33■□□□□ 0.2
KPNA4-201ENST00000334256 APBB1O00213 710 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms