RNA–Protein interactions for RNA: ENST00000331428.5

XKR3-201, Transcript of XK related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XKR3, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XKR3-201ENST00000331428 PAK3O75914 559 aaPredicted RBP10.68□□□□□ -0.7
XKR3-201ENST00000331428 ASTLQ6HA08 431 aaPredicted RBP10.65□□□□□ -0.7
XKR3-201ENST00000331428 PHF12Q96QT6 1004 aa10.64□□□□□ -0.71
XKR3-201ENST00000331428 MMRN1Q13201 1228 aa10.6□□□□□ -0.71
XKR3-201ENST00000331428 ATMINO43313 823 aaPredicted RBP10.6□□□□□ -0.71
XKR3-201ENST00000331428 CREBZFQ9NS37 354 aa10.56□□□□□ -0.72
XKR3-201ENST00000331428 SPNS2Q8IVW8 549 aa10.52□□□□□ -0.73
XKR3-201ENST00000331428 MS4A3Q96HJ5 214 aa10.48□□□□□ -0.73
XKR3-201ENST00000331428 ZBTB22O15209 634 aa10.45□□□□□ -0.74
XKR3-201ENST00000331428 NPM1P06748 294 aaKnown RBP eCLIP10.42□□□□□ -0.74
XKR3-201ENST00000331428 STAG3Q9UJ98 1225 aa10.41□□□□□ -0.74
XKR3-201ENST00000331428 ATN1P54259 1190 aaPredicted RBP10.4□□□□□ -0.74
XKR3-201ENST00000331428 POTEFA5A3E0 1075 aa10.38□□□□□ -0.75
XKR3-201ENST00000331428 ST18O60284 1047 aa10.38□□□□□ -0.75
XKR3-201ENST00000331428 SEC24BO95487 1268 aa10.26□□□□□ -0.77
XKR3-201ENST00000331428 SLAIN1Q8ND83 568 aa10.26□□□□□ -0.77
XKR3-201ENST00000331428 TMEM121BQ9BXQ6 578 aaPredicted RBP10.26□□□□□ -0.77
XKR3-201ENST00000331428 BMP2KQ9NSY1 1161 aaPredicted RBP10.25□□□□□ -0.77
XKR3-201ENST00000331428 MNX1P50219 401 aaPredicted RBP10.22□□□□□ -0.77
XKR3-201ENST00000331428 COLQQ9Y215 455 aaPredicted RBP10.22□□□□□ -0.77
XKR3-201ENST00000331428 TIE1P35590 1138 aa10.19□□□□□ -0.78
XKR3-201ENST00000331428 KIF12Q96FN5 646 aa10.15□□□□□ -0.79
XKR3-201ENST00000331428 SNPHO15079 494 aa10.13□□□□□ -0.79
XKR3-201ENST00000331428 IER5LQ5T953 404 aa10.13□□□□□ -0.79
XKR3-201ENST00000331428 TSPYL2Q9H2G4 693 aaPredicted RBP10.12□□□□□ -0.79
XKR3-201ENST00000331428 CCDC61Q9Y6R9 512 aa10.12□□□□□ -0.79
XKR3-201ENST00000331428 TRPC6Q9Y210 931 aa10.11□□□□□ -0.79
XKR3-201ENST00000331428 MARVELD3Q96A59 401 aa10.08□□□□□ -0.8
XKR3-201ENST00000331428 TTLL13PA6NNM8 815 aa10.07□□□□□ -0.8
XKR3-201ENST00000331428 KRTAP3-3Q9BYR6 98 aa10.02□□□□□ -0.81
XKR3-201ENST00000331428 KRTAP3-2Q9BYR7 98 aa10.02□□□□□ -0.81
XKR3-201ENST00000331428 TRIM35Q9UPQ4 493 aa10.01□□□□□ -0.81
XKR3-201ENST00000331428 MAP3K13O43283 966 aa10□□□□□ -0.81
XKR3-201ENST00000331428 EMP3P54852 163 aa9.97□□□□□ -0.81
XKR3-201ENST00000331428 PLCG2P16885 1265 aa9.96□□□□□ -0.81
XKR3-201ENST00000331428 HS3ST6Q96QI5 342 aa9.92□□□□□ -0.82
XKR3-201ENST00000331428 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.92□□□□□ -0.82
XKR3-201ENST00000331428 POTEB3A0JP26 581 aa9.87□□□□□ -0.83
XKR3-201ENST00000331428 FAM205CA6NFA0 338 aa9.87□□□□□ -0.83
XKR3-201ENST00000331428 POTEBQ6S5H4 581 aa9.87□□□□□ -0.83
XKR3-201ENST00000331428 RNF166Q96A37 237 aaPredicted RBP9.87□□□□□ -0.83
XKR3-201ENST00000331428 SGIP1Q9BQI5 828 aa9.87□□□□□ -0.83
XKR3-201ENST00000331428 SPDYE4A6NLX3 237 aa9.83□□□□□ -0.84
XKR3-201ENST00000331428 IRX5P78411 483 aaPredicted RBP9.83□□□□□ -0.84
XKR3-201ENST00000331428 OCEL1Q9H607 264 aa9.79□□□□□ -0.84
XKR3-201ENST00000331428 PCDHB13Q9Y5F0 798 aa9.79□□□□□ -0.84
XKR3-201ENST00000331428 TMEM106CQ9BVX2 250 aa9.77□□□□□ -0.84
XKR3-201ENST00000331428 MYT1LQ9UL68 1186 aa9.74□□□□□ -0.85
XKR3-201ENST00000331428 RASEFQ8IZ41 740 aa9.73□□□□□ -0.85
XKR3-201ENST00000331428 FKBP8Q14318 412 aa9.71□□□□□ -0.86
XKR3-201ENST00000331428 C3orf67Q6ZVT6 689 aa9.67□□□□□ -0.86
XKR3-201ENST00000331428 IFNL1Q8IU54 200 aa9.67□□□□□ -0.86
XKR3-201ENST00000331428 PLEKHG5O94827 1062 aa9.66□□□□□ -0.86
XKR3-201ENST00000331428 RTN4Q9NQC3 1192 aaKnown RBP9.64□□□□□ -0.87
XKR3-201ENST00000331428 PTGER2P43116 358 aa9.61□□□□□ -0.87
XKR3-201ENST00000331428 AMER1Q5JTC6 1135 aaPredicted RBP9.61□□□□□ -0.87
XKR3-201ENST00000331428 L3MBTL3Q96JM7 780 aaPredicted RBP9.61□□□□□ -0.87
XKR3-201ENST00000331428 ERBB3P21860 1342 aa9.57□□□□□ -0.88
XKR3-201ENST00000331428 HOXB1P14653 301 aaPredicted RBP9.55□□□□□ -0.88
XKR3-201ENST00000331428 MIER1Q8N108 512 aa9.52□□□□□ -0.89
XKR3-201ENST00000331428 ZNF710Q8N1W2 664 aa9.5□□□□□ -0.89
XKR3-201ENST00000331428 PDCD7Q8N8D1 485 aaKnown RBP9.5□□□□□ -0.89
XKR3-201ENST00000331428 PLA2G2EQ9NZK7 142 aa9.49□□□□□ -0.89
XKR3-201ENST00000331428 HOXB3P14651 431 aaPredicted RBP9.48□□□□□ -0.89
XKR3-201ENST00000331428 SLC24A1O60721 1099 aa9.45□□□□□ -0.9
XKR3-201ENST00000331428 VARS2Q5ST30 1063 aaKnown RBP9.45□□□□□ -0.9
XKR3-201ENST00000331428 ZNF687Q8N1G0 1237 aa9.44□□□□□ -0.9
XKR3-201ENST00000331428 DOK7Q18PE1 504 aa9.42□□□□□ -0.9
XKR3-201ENST00000331428 PROM2Q8N271 834 aa9.42□□□□□ -0.9
XKR3-201ENST00000331428 NUBP1P53384 320 aa9.42□□□□□ -0.9
XKR3-201ENST00000331428 FAM212AQ96EL1 285 aa9.41□□□□□ -0.9
XKR3-201ENST00000331428 MKRN3Q13064 507 aaKnown RBP9.39□□□□□ -0.91
XKR3-201ENST00000331428 ZBTB47Q9UFB7 747 aaPredicted RBP9.38□□□□□ -0.91
XKR3-201ENST00000331428 RIMBP2O15034 1052 aa9.37□□□□□ -0.91
XKR3-201ENST00000331428 GOLGA2Q08379 1002 aa9.36□□□□□ -0.91
XKR3-201ENST00000331428 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.35□□□□□ -0.91
XKR3-201ENST00000331428 ANKRD13DQ6ZTN6 518 aa9.34□□□□□ -0.91
XKR3-201ENST00000331428 PLCD3Q8N3E9 789 aa9.32□□□□□ -0.92
XKR3-201ENST00000331428 HCSTQ9UBK5 93 aa9.32□□□□□ -0.92
XKR3-201ENST00000331428 G3V3G9 751 aa9.31□□□□□ -0.92
XKR3-201ENST00000331428 DCAF8Q5TAQ9 597 aa9.31□□□□□ -0.92
XKR3-201ENST00000331428 PCDHB8Q9UN66 801 aa9.3□□□□□ -0.92
XKR3-201ENST00000331428 ZSWIM6Q9HCJ5 1215 aa9.28□□□□□ -0.92
XKR3-201ENST00000331428 IRX2Q9BZI1 471 aaPredicted RBP9.26□□□□□ -0.93
XKR3-201ENST00000331428 PYGBP11216 843 aa9.25□□□□□ -0.93
XKR3-201ENST00000331428 BOLA1Q9Y3E2 137 aa9.25□□□□□ -0.93
XKR3-201ENST00000331428 RGS20O76081 388 aa9.24□□□□□ -0.93
XKR3-201ENST00000331428 ILDR1Q86SU0 546 aaPredicted RBP9.23□□□□□ -0.93
XKR3-201ENST00000331428 LSM11P83369 360 aaKnown RBP eCLIP9.23□□□□□ -0.93
XKR3-201ENST00000331428 DPY19L2Q6NUT2 758 aa9.2□□□□□ -0.94
XKR3-201ENST00000331428 FBXO3Q9UK99 471 aa9.2□□□□□ -0.94
XKR3-201ENST00000331428 ZNF467Q7Z7K2 595 aaPredicted RBP9.17□□□□□ -0.94
XKR3-201ENST00000331428 GPR153Q6NV75 609 aa9.16□□□□□ -0.94
XKR3-201ENST00000331428 PBX2P40425 430 aa9.1□□□□□ -0.95
XKR3-201ENST00000331428 ZNF316A6NFI3 1004 aaPredicted RBP9.1□□□□□ -0.95
XKR3-201ENST00000331428 PSEN1P49768 467 aa9.09□□□□□ -0.95
XKR3-201ENST00000331428 VASPP50552 380 aaPredicted RBP9.08□□□□□ -0.96
XKR3-201ENST00000331428 ARSIQ5FYB1 569 aa9.04□□□□□ -0.96
XKR3-201ENST00000331428 IFFO2Q5TF58 517 aa9□□□□□ -0.97
XKR3-201ENST00000331428 IFNLR1Q8IU57 520 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms