RNA–Protein interactions for RNA: ENST00000328913.7

MCF2L2-201, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene MCF2L2, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-201ENST00000328913 WRNQ14191 1432 aaPredicted RBP eCLIP21.33■■□□□ 1.01
MCF2L2-201ENST00000328913 SLC24A1O60721 1099 aa21.32■■□□□ 1
MCF2L2-201ENST00000328913 PLPPR3Q6T4P5 718 aa21.31■■□□□ 1
MCF2L2-201ENST00000328913 HSP90AA1P07900 732 aaKnown RBP21.3■■□□□ 1
MCF2L2-201ENST00000328913 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.29■■□□□ 1
MCF2L2-201ENST00000328913 EIF4G2P78344 907 aaKnown RBP eCLIP21.28■■□□□ 1
MCF2L2-201ENST00000328913 GOLGA3Q08378 1498 aa21.28■■□□□ 1
MCF2L2-201ENST00000328913 GLIPR1L2Q4G1C9 344 aa21.22■□□□□ 0.99
MCF2L2-201ENST00000328913 TNIKQ9UKE5 1360 aa21.22■□□□□ 0.99
MCF2L2-201ENST00000328913 BAZ1AQ9NRL2 1556 aaPredicted RBP21.21■□□□□ 0.99
MCF2L2-201ENST00000328913 KCNH8Q96L42 1107 aa21.2■□□□□ 0.99
MCF2L2-201ENST00000328913 KIF27Q86VH2 1401 aa21.2■□□□□ 0.98
MCF2L2-201ENST00000328913 PLEKHD1A6NEE1 506 aa21.2■□□□□ 0.98
MCF2L2-201ENST00000328913 CECR2Q9BXF3 1484 aa21.19■□□□□ 0.98
MCF2L2-201ENST00000328913 WDR43Q15061 677 aaKnown RBP eCLIP21.17■□□□□ 0.98
MCF2L2-201ENST00000328913 SUPT16HQ9Y5B9 1047 aaKnown RBP21.14■□□□□ 0.98
MCF2L2-201ENST00000328913 RRP7BPQ9NSQ0 103 aa21.12■□□□□ 0.97
MCF2L2-201ENST00000328913 KDM2AQ9Y2K7 1162 aa21.12■□□□□ 0.97
MCF2L2-201ENST00000328913 ERCC6Q03468 1493 aa21.11■□□□□ 0.97
MCF2L2-201ENST00000328913 DDRGK1Q96HY6 314 aa21.1■□□□□ 0.97
MCF2L2-201ENST00000328913 ARXQ96QS3 562 aa21.05■□□□□ 0.96
MCF2L2-201ENST00000328913 CEP164Q9UPV0 1460 aa21.04■□□□□ 0.96
MCF2L2-201ENST00000328913 PPP4R2Q9NY27 417 aa21.04■□□□□ 0.96
MCF2L2-201ENST00000328913 CFDP1Q9UEE9 299 aaPredicted RBP21.02■□□□□ 0.96
MCF2L2-201ENST00000328913 BECN1Q14457 450 aa20.98■□□□□ 0.95
MCF2L2-201ENST00000328913 PPM1GO15355 546 aaPredicted RBP20.96■□□□□ 0.95
MCF2L2-201ENST00000328913 SIN3AQ96ST3 1273 aa20.95■□□□□ 0.94
MCF2L2-201ENST00000328913 NOP58Q9Y2X3 529 aaKnown RBP20.9■□□□□ 0.94
MCF2L2-201ENST00000328913 CARMIL1Q5VZK9 1371 aa20.89■□□□□ 0.94
MCF2L2-201ENST00000328913 CUX2O14529 1486 aa20.89■□□□□ 0.93
MCF2L2-201ENST00000328913 TIMELESSQ9UNS1 1208 aa20.88■□□□□ 0.93
MCF2L2-201ENST00000328913 RGL3Q3MIN7 710 aa20.88■□□□□ 0.93
MCF2L2-201ENST00000328913 PPP1R15AO75807 674 aaPredicted RBP20.87■□□□□ 0.93
MCF2L2-201ENST00000328913 MROH2BQ7Z745 1585 aa20.87■□□□□ 0.93
MCF2L2-201ENST00000328913 SENP3Q9H4L4 574 aaPredicted RBP20.87■□□□□ 0.93
MCF2L2-201ENST00000328913 CCNB3Q8WWL7 1395 aa20.86■□□□□ 0.93
MCF2L2-201ENST00000328913 CCER2I3L3R5 266 aa20.86■□□□□ 0.93
MCF2L2-201ENST00000328913 SENP3-EIF4A1A0A087X0R7 540 aa20.85■□□□□ 0.93
MCF2L2-201ENST00000328913 TRIM44Q96DX7 344 aaPredicted RBP20.83■□□□□ 0.93
MCF2L2-201ENST00000328913 MYH16Q9H6N6 1097 aa20.83■□□□□ 0.92
MCF2L2-201ENST00000328913 RBM19Q9Y4C8 960 aaKnown RBP20.83■□□□□ 0.92
MCF2L2-201ENST00000328913 B4GALNT3Q6L9W6 998 aa20.83■□□□□ 0.92
MCF2L2-201ENST00000328913 ARID4BQ4LE39 1312 aaPredicted RBP20.82■□□□□ 0.92
MCF2L2-201ENST00000328913 SOGA1O94964 1423 aa20.81■□□□□ 0.92
MCF2L2-201ENST00000328913 ERICH6BQ5W0A0 696 aa20.81■□□□□ 0.92
MCF2L2-201ENST00000328913 CCDC88BA6NC98 1476 aa20.8■□□□□ 0.92
MCF2L2-201ENST00000328913 CARD11Q9BXL7 1154 aa20.8■□□□□ 0.92
MCF2L2-201ENST00000328913 LAS1LQ9Y4W2 734 aaKnown RBP20.79■□□□□ 0.92
MCF2L2-201ENST00000328913 SMARCA2P51531 1590 aa20.77■□□□□ 0.92
MCF2L2-201ENST00000328913 FHAD1B1AJZ9 1412 aa20.77■□□□□ 0.92
MCF2L2-201ENST00000328913 GOLGA6L22H0YM25 854 aa20.77■□□□□ 0.92
MCF2L2-201ENST00000328913 KNSTRNQ9Y448 316 aa20.76■□□□□ 0.91
MCF2L2-201ENST00000328913 CDCA8Q53HL2 280 aa20.76■□□□□ 0.91
MCF2L2-201ENST00000328913 PDS5BQ9NTI5 1447 aa20.75■□□□□ 0.91
MCF2L2-201ENST00000328913 EIF4G1Q04637 1599 aaKnown RBP20.73■□□□□ 0.91
MCF2L2-201ENST00000328913 VPS8Q8N3P4 1428 aa20.71■□□□□ 0.91
MCF2L2-201ENST00000328913 C14orf37Q86TY3 774 aa20.69■□□□□ 0.9
MCF2L2-201ENST00000328913 RTN4Q9NQC3 1192 aaKnown RBP20.69■□□□□ 0.9
MCF2L2-201ENST00000328913 RGS3P49796 1198 aa20.68■□□□□ 0.9
MCF2L2-201ENST00000328913 CFAP53Q96M91 514 aa20.68■□□□□ 0.9
MCF2L2-201ENST00000328913 DEKP35659 375 aaKnown RBP20.68■□□□□ 0.9
MCF2L2-201ENST00000328913 TDRD9Q8NDG6 1382 aaKnown RBP20.67■□□□□ 0.9
MCF2L2-201ENST00000328913 TSHZ2Q9NRE2 1034 aa20.66■□□□□ 0.9
MCF2L2-201ENST00000328913 NCLP19338 710 aaKnown RBP20.66■□□□□ 0.9
MCF2L2-201ENST00000328913 SETD5Q9C0A6 1442 aa20.66■□□□□ 0.9
MCF2L2-201ENST00000328913 PLEKHG5O94827 1062 aa20.65■□□□□ 0.9
MCF2L2-201ENST00000328913 ABCC8Q09428 1581 aa20.62■□□□□ 0.89
MCF2L2-201ENST00000328913 FTSJ3Q8IY81 847 aaKnown RBP20.62■□□□□ 0.89
MCF2L2-201ENST00000328913 ZBTB7CA1YPR0 619 aa20.6■□□□□ 0.89
MCF2L2-201ENST00000328913 CADPSQ9ULU8 1353 aa20.58■□□□□ 0.89
MCF2L2-201ENST00000328913 HSPA5P11021 654 aaKnown RBP20.58■□□□□ 0.88
MCF2L2-201ENST00000328913 NEUROD2Q15784 382 aa20.57■□□□□ 0.88
MCF2L2-201ENST00000328913 CARMIL2Q6F5E8 1435 aa20.57■□□□□ 0.88
MCF2L2-201ENST00000328913 KANK4Q5T7N3 995 aaPredicted RBP20.56■□□□□ 0.88
MCF2L2-201ENST00000328913 NAP1L5Q96NT1 182 aaPredicted RBP20.56■□□□□ 0.88
MCF2L2-201ENST00000328913 TRHP20396 242 aaPredicted RBP20.55■□□□□ 0.88
MCF2L2-201ENST00000328913 FRAT1Q92837 279 aaPredicted RBP20.55■□□□□ 0.88
MCF2L2-201ENST00000328913 A0A0G2JS52 829 aa20.54■□□□□ 0.88
MCF2L2-201ENST00000328913 CC2D1BQ5T0F9 858 aaKnown RBP20.54■□□□□ 0.88
MCF2L2-201ENST00000328913 PTMAP06454 111 aaKnown RBP20.54■□□□□ 0.88
MCF2L2-201ENST00000328913 TOP2AP11388 1531 aaKnown RBP20.52■□□□□ 0.88
MCF2L2-201ENST00000328913 POGKQ9P215 609 aa20.52■□□□□ 0.88
MCF2L2-201ENST00000328913 RAB3GAP2Q9H2M9 1393 aa20.52■□□□□ 0.87
MCF2L2-201ENST00000328913 CASC1Q6TDU7 716 aa20.51■□□□□ 0.87
MCF2L2-201ENST00000328913 MS4A1P11836 297 aa20.5■□□□□ 0.87
MCF2L2-201ENST00000328913 WIZO95785 1651 aa20.49■□□□□ 0.87
MCF2L2-201ENST00000328913 MAPK8IP3Q9UPT6 1336 aa20.48■□□□□ 0.87
MCF2L2-201ENST00000328913 ATAD2BQ9ULI0 1458 aa20.48■□□□□ 0.87
MCF2L2-201ENST00000328913 TNNT2P45379 298 aaPredicted RBP20.48■□□□□ 0.87
MCF2L2-201ENST00000328913 MLECQ14165 292 aa20.48■□□□□ 0.87
MCF2L2-201ENST00000328913 NUDCQ9Y266 331 aa20.48■□□□□ 0.87
MCF2L2-201ENST00000328913 KANK1Q14678 1352 aa20.48■□□□□ 0.87
MCF2L2-201ENST00000328913 TMF1P82094 1093 aa20.47■□□□□ 0.87
MCF2L2-201ENST00000328913 DCAF11Q8TEB1 546 aa20.47■□□□□ 0.87
MCF2L2-201ENST00000328913 DNTTIP2Q5QJE6 756 aaKnown RBP20.46■□□□□ 0.87
MCF2L2-201ENST00000328913 HAP1P54257 671 aaPredicted RBP20.46■□□□□ 0.87
MCF2L2-201ENST00000328913 CHMP4BQ9H444 224 aaKnown RBP20.45■□□□□ 0.86
MCF2L2-201ENST00000328913 ARHGAP35Q9NRY4 1499 aa20.45■□□□□ 0.86
MCF2L2-201ENST00000328913 TCERG1O14776 1098 aaKnown RBP20.44■□□□□ 0.86
MCF2L2-201ENST00000328913 L1TD1Q5T7N2 865 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms