RNA–Protein interactions for RNA: ENST00000328257.12

PPME1-201, Transcript of protein phosphatase methylesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPME1, Length 2,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-201ENST00000328257 SMARCA2P51531 1590 aa17.78■□□□□ 0.44
PPME1-201ENST00000328257 BCL11BQ9C0K0 894 aaPredicted RBP17.76■□□□□ 0.43
PPME1-201ENST00000328257 MROH2BQ7Z745 1585 aa17.72■□□□□ 0.43
PPME1-201ENST00000328257 HMGXB3Q12766 1538 aa17.71■□□□□ 0.43
PPME1-201ENST00000328257 PEG3Q9GZU2 1588 aa17.7■□□□□ 0.42
PPME1-201ENST00000328257 ZBTB47Q9UFB7 747 aaPredicted RBP17.68■□□□□ 0.42
PPME1-201ENST00000328257 AEBP2Q6ZN18 517 aaPredicted RBP17.67■□□□□ 0.42
PPME1-201ENST00000328257 IPO9Q96P70 1041 aaKnown RBP17.67■□□□□ 0.42
PPME1-201ENST00000328257 USP35Q9P2H5 1018 aa17.67■□□□□ 0.42
PPME1-201ENST00000328257 NEFMP07197 916 aa17.66■□□□□ 0.42
PPME1-201ENST00000328257 BAZ1BQ9UIG0 1483 aaKnown RBP17.65■□□□□ 0.42
PPME1-201ENST00000328257 ANP32AP39687 249 aaKnown RBP17.63■□□□□ 0.41
PPME1-201ENST00000328257 FAM43AQ8N2R8 423 aa17.62■□□□□ 0.41
PPME1-201ENST00000328257 HSP90AA2PQ14568 343 aaPredicted RBP17.62■□□□□ 0.41
PPME1-201ENST00000328257 KLHL34Q8N239 644 aa17.58■□□□□ 0.41
PPME1-201ENST00000328257 RRP9O43818 475 aaKnown RBP17.58■□□□□ 0.4
PPME1-201ENST00000328257 TRIM52Q96A61 297 aa17.58■□□□□ 0.4
PPME1-201ENST00000328257 IRX6P78412 446 aaPredicted RBP17.56■□□□□ 0.4
PPME1-201ENST00000328257 TAF7LQ5H9L4 462 aa17.55■□□□□ 0.4
PPME1-201ENST00000328257 WIZO95785 1651 aa17.53■□□□□ 0.4
PPME1-201ENST00000328257 PPP4R2Q9NY27 417 aa17.53■□□□□ 0.4
PPME1-201ENST00000328257 GSE1Q14687 1217 aa17.52■□□□□ 0.4
PPME1-201ENST00000328257 RANGAP1P46060 587 aaPredicted RBP17.51■□□□□ 0.39
PPME1-201ENST00000328257 WRNQ14191 1432 aaPredicted RBP eCLIP17.46■□□□□ 0.39
PPME1-201ENST00000328257 RSF1Q96T23 1441 aaPredicted RBP17.46■□□□□ 0.39
PPME1-201ENST00000328257 HNRNPUL2Q1KMD3 747 aaKnown RBP17.45■□□□□ 0.38
PPME1-201ENST00000328257 LAS1LQ9Y4W2 734 aaKnown RBP17.45■□□□□ 0.38
PPME1-201ENST00000328257 HSP90AA1P07900 732 aaKnown RBP17.44■□□□□ 0.38
PPME1-201ENST00000328257 NESP48681 1621 aa17.44■□□□□ 0.38
PPME1-201ENST00000328257 PPM1GO15355 546 aaPredicted RBP17.42■□□□□ 0.38
PPME1-201ENST00000328257 ERCC6Q03468 1493 aa17.41■□□□□ 0.38
PPME1-201ENST00000328257 B4GALNT3Q6L9W6 998 aa17.39■□□□□ 0.37
PPME1-201ENST00000328257 NCBP3Q53F19 620 aaKnown RBP17.38■□□□□ 0.37
PPME1-201ENST00000328257 LAMC3Q9Y6N6 1575 aa17.37■□□□□ 0.37
PPME1-201ENST00000328257 FRAT1Q92837 279 aaPredicted RBP17.36■□□□□ 0.37
PPME1-201ENST00000328257 PRDM4Q9UKN5 801 aa17.36■□□□□ 0.37
PPME1-201ENST00000328257 CCER2I3L3R5 266 aa17.34■□□□□ 0.37
PPME1-201ENST00000328257 NAP1L5Q96NT1 182 aaPredicted RBP17.34■□□□□ 0.37
PPME1-201ENST00000328257 TOP2AP11388 1531 aaKnown RBP17.32■□□□□ 0.36
PPME1-201ENST00000328257 NAP1L2Q9ULW6 460 aaPredicted RBP17.31■□□□□ 0.36
PPME1-201ENST00000328257 CALD1Q05682 793 aaKnown RBP17.31■□□□□ 0.36
PPME1-201ENST00000328257 RGS3P49796 1198 aa17.29■□□□□ 0.36
PPME1-201ENST00000328257 PAXIP1Q6ZW49 1069 aaPredicted RBP17.29■□□□□ 0.36
PPME1-201ENST00000328257 DCAF11Q8TEB1 546 aa17.28■□□□□ 0.36
PPME1-201ENST00000328257 BBXQ8WY36 941 aaPredicted RBP17.28■□□□□ 0.36
PPME1-201ENST00000328257 RRAGDQ9NQL2 400 aaPredicted RBP17.28■□□□□ 0.36
PPME1-201ENST00000328257 CADPSQ9ULU8 1353 aa17.28■□□□□ 0.36
PPME1-201ENST00000328257 DDX10Q13206 875 aaKnown RBP17.28■□□□□ 0.36
PPME1-201ENST00000328257 CUX2O14529 1486 aa17.28■□□□□ 0.36
PPME1-201ENST00000328257 ARXQ96QS3 562 aa17.27■□□□□ 0.36
PPME1-201ENST00000328257 PDS5BQ9NTI5 1447 aa17.25■□□□□ 0.35
PPME1-201ENST00000328257 KIF21AQ7Z4S6 1674 aa17.24■□□□□ 0.35
PPME1-201ENST00000328257 CHMP4BQ9H444 224 aaKnown RBP17.22■□□□□ 0.35
PPME1-201ENST00000328257 PNNQ9H307 717 aaKnown RBP17.21■□□□□ 0.35
PPME1-201ENST00000328257 EEA1Q15075 1411 aa17.21■□□□□ 0.35
PPME1-201ENST00000328257 THOC2Q8NI27 1593 aaKnown RBP17.21■□□□□ 0.34
PPME1-201ENST00000328257 CENPJQ9HC77 1338 aaPredicted RBP17.2■□□□□ 0.34
PPME1-201ENST00000328257 ANP32CO43423 234 aa17.2■□□□□ 0.34
PPME1-201ENST00000328257 NPM2Q86SE8 214 aaKnown RBP17.2■□□□□ 0.34
PPME1-201ENST00000328257 NFKBIBQ15653 356 aa17.19■□□□□ 0.34
PPME1-201ENST00000328257 RSPH4AQ5TD94 716 aa17.19■□□□□ 0.34
PPME1-201ENST00000328257 ZNF326Q5BKZ1 582 aaKnown RBP17.19■□□□□ 0.34
PPME1-201ENST00000328257 GTF2E1P29083 439 aaPredicted RBP17.18■□□□□ 0.34
PPME1-201ENST00000328257 HNRNPUQ00839 825 aaKnown RBP eCLIP17.18■□□□□ 0.34
PPME1-201ENST00000328257 DHX57Q6P158 1386 aaKnown RBP17.17■□□□□ 0.34
PPME1-201ENST00000328257 PDCL3Q9H2J4 239 aa17.16■□□□□ 0.34
PPME1-201ENST00000328257 CFTRP13569 1480 aa17.16■□□□□ 0.34
PPME1-201ENST00000328257 CEP162Q5TB80 1403 aa17.14■□□□□ 0.33
PPME1-201ENST00000328257 PPP1R15AO75807 674 aaPredicted RBP17.13■□□□□ 0.33
PPME1-201ENST00000328257 CANXP27824 592 aaKnown RBP17.13■□□□□ 0.33
PPME1-201ENST00000328257 IPO4Q8TEX9 1081 aaKnown RBP17.13■□□□□ 0.33
PPME1-201ENST00000328257 CCDC88BA6NC98 1476 aa17.12■□□□□ 0.33
PPME1-201ENST00000328257 STAC3Q96MF2 364 aa17.11■□□□□ 0.33
PPME1-201ENST00000328257 FANCD2Q9BXW9 1451 aa17.09■□□□□ 0.33
PPME1-201ENST00000328257 CLCN1P35523 988 aa17.08■□□□□ 0.33
PPME1-201ENST00000328257 MRC2Q9UBG0 1479 aa17.08■□□□□ 0.33
PPME1-201ENST00000328257 CEP164Q9UPV0 1460 aa17.08■□□□□ 0.32
PPME1-201ENST00000328257 CNGB1Q14028 1251 aaPredicted RBP17.05■□□□□ 0.32
PPME1-201ENST00000328257 PRDM2Q13029 1718 aa17.05■□□□□ 0.32
PPME1-201ENST00000328257 WDR62O43379 1518 aa17.04■□□□□ 0.32
PPME1-201ENST00000328257 BRD2P25440 801 aaKnown RBP17.01■□□□□ 0.31
PPME1-201ENST00000328257 DHX37Q8IY37 1157 aaKnown RBP17.01■□□□□ 0.31
PPME1-201ENST00000328257 ARID4BQ4LE39 1312 aaPredicted RBP17■□□□□ 0.31
PPME1-201ENST00000328257 DDRGK1Q96HY6 314 aa16.99■□□□□ 0.31
PPME1-201ENST00000328257 SIN3AQ96ST3 1273 aa16.99■□□□□ 0.31
PPME1-201ENST00000328257 TPM2P07951 284 aa16.96■□□□□ 0.31
PPME1-201ENST00000328257 NCLP19338 710 aaKnown RBP16.96■□□□□ 0.31
PPME1-201ENST00000328257 L1TD1Q5T7N2 865 aaKnown RBP16.95■□□□□ 0.3
PPME1-201ENST00000328257 PDE4AP27815 886 aa16.94■□□□□ 0.3
PPME1-201ENST00000328257 CHMP4AQ9BY43 222 aa16.94■□□□□ 0.3
PPME1-201ENST00000328257 URB2Q14146 1524 aaKnown RBP16.93■□□□□ 0.3
PPME1-201ENST00000328257 FRAT2O75474 233 aaPredicted RBP16.93■□□□□ 0.3
PPME1-201ENST00000328257 DNAJC5Q9H3Z4 198 aa16.92■□□□□ 0.3
PPME1-201ENST00000328257 ZHX1Q9UKY1 873 aaPredicted RBP16.92■□□□□ 0.3
PPME1-201ENST00000328257 SMAP1Q8IYB5 467 aaPredicted RBP16.91■□□□□ 0.3
PPME1-201ENST00000328257 FOXD1Q16676 465 aa16.9■□□□□ 0.3
PPME1-201ENST00000328257 ZFP91Q96JP5 570 aaPredicted RBP16.9■□□□□ 0.3
PPME1-201ENST00000328257 BACH2Q9BYV9 841 aa16.9■□□□□ 0.3
PPME1-201ENST00000328257 TCERG1O14776 1098 aaKnown RBP16.9■□□□□ 0.3
PPME1-201ENST00000328257 FTSJ3Q8IY81 847 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms