RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 GOLGA6L6A8MZA4 724 aa8.3□□□□□ -1.08
SSH1-202ENST00000326495 PPM1GO15355 546 aaPredicted RBP8.29□□□□□ -1.08
SSH1-202ENST00000326495 ANO8Q9HCE9 1232 aaPredicted RBP8.29□□□□□ -1.08
SSH1-202ENST00000326495 CASC1Q6TDU7 716 aa8.29□□□□□ -1.08
SSH1-202ENST00000326495 WDR43Q15061 677 aaKnown RBP eCLIP8.28□□□□□ -1.08
SSH1-202ENST00000326495 PABPN1Q86U42 306 aaKnown RBP eCLIP8.27□□□□□ -1.09
SSH1-202ENST00000326495 FBLN2P98095 1184 aa8.26□□□□□ -1.09
SSH1-202ENST00000326495 PNNQ9H307 717 aaKnown RBP8.26□□□□□ -1.09
SSH1-202ENST00000326495 DDX10Q13206 875 aaKnown RBP8.25□□□□□ -1.09
SSH1-202ENST00000326495 FAM9BQ8IZU0 186 aa8.25□□□□□ -1.09
SSH1-202ENST00000326495 ESF1Q9H501 851 aaKnown RBP8.25□□□□□ -1.09
SSH1-202ENST00000326495 ZRSR1Q15695 479 aaKnown RBP8.25□□□□□ -1.09
SSH1-202ENST00000326495 MRS2Q9HD23 443 aa8.25□□□□□ -1.09
SSH1-202ENST00000326495 CALRP27797 417 aaKnown RBP8.24□□□□□ -1.09
SSH1-202ENST00000326495 GOLGA3Q08378 1498 aa8.24□□□□□ -1.09
SSH1-202ENST00000326495 CHAF1AQ13111 956 aaPredicted RBP8.22□□□□□ -1.09
SSH1-202ENST00000326495 FHAD1B1AJZ9 1412 aa8.22□□□□□ -1.09
SSH1-202ENST00000326495 KAT6BQ8WYB5 2073 aa8.22□□□□□ -1.09
SSH1-202ENST00000326495 AMER1Q5JTC6 1135 aaPredicted RBP8.22□□□□□ -1.09
SSH1-202ENST00000326495 BCL11AQ9H165 835 aa8.22□□□□□ -1.09
SSH1-202ENST00000326495 CLIP1P30622 1438 aa8.22□□□□□ -1.09
SSH1-202ENST00000326495 CEP162Q5TB80 1403 aa8.21□□□□□ -1.09
SSH1-202ENST00000326495 EIF4G2P78344 907 aaKnown RBP eCLIP8.2□□□□□ -1.13e-7■■■■■ 36.1
SSH1-202ENST00000326495 PTMAP06454 111 aaKnown RBP8.19□□□□□ -1.1
SSH1-202ENST00000326495 NOP58Q9Y2X3 529 aaKnown RBP8.19□□□□□ -1.1
SSH1-202ENST00000326495 MIER1Q8N108 512 aa8.19□□□□□ -1.1
SSH1-202ENST00000326495 ZNF777Q9ULD5 760 aaPredicted RBP8.18□□□□□ -1.1
SSH1-202ENST00000326495 MTUS2Q5JR59 1369 aa8.18□□□□□ -1.1
SSH1-202ENST00000326495 TSPY4P0CV99 314 aa8.17□□□□□ -1.1
SSH1-202ENST00000326495 TSPY10P0CW01 314 aa8.17□□□□□ -1.1
SSH1-202ENST00000326495 CCDC34Q96HJ3 373 aa8.17□□□□□ -1.1
SSH1-202ENST00000326495 CFAP53Q96M91 514 aa8.17□□□□□ -1.1
SSH1-202ENST00000326495 CEP164Q9UPV0 1460 aa8.17□□□□□ -1.1
SSH1-202ENST00000326495 DNTTIP2Q5QJE6 756 aaKnown RBP8.16□□□□□ -1.1
SSH1-202ENST00000326495 PPP4R2Q9NY27 417 aa8.16□□□□□ -1.1
SSH1-202ENST00000326495 CHMP4CQ96CF2 233 aa8.16□□□□□ -1.1
SSH1-202ENST00000326495 HDAC5Q9UQL6 1122 aa8.16□□□□□ -1.1
SSH1-202ENST00000326495 NAP1L5Q96NT1 182 aaPredicted RBP8.16□□□□□ -1.1
SSH1-202ENST00000326495 ARXQ96QS3 562 aa8.15□□□□□ -1.1
SSH1-202ENST00000326495 ARID3CA6NKF2 412 aa8.15□□□□□ -1.1
SSH1-202ENST00000326495 NPM1P06748 294 aaKnown RBP eCLIP8.15□□□□□ -1.1
SSH1-202ENST00000326495 P3H3Q8IVL6 736 aa8.14□□□□□ -1.11
SSH1-202ENST00000326495 PHLDB1Q86UU1 1377 aa8.14□□□□□ -1.11
SSH1-202ENST00000326495 BAZ1AQ9NRL2 1556 aaPredicted RBP8.14□□□□□ -1.11
SSH1-202ENST00000326495 STAG3Q9UJ98 1225 aa8.13□□□□□ -1.11
SSH1-202ENST00000326495 FTSJ3Q8IY81 847 aaKnown RBP8.12□□□□□ -1.11
SSH1-202ENST00000326495 HTATSF1O43719 755 aaKnown RBP8.12□□□□□ -1.11
SSH1-202ENST00000326495 MSNP26038 577 aaKnown RBP8.11□□□□□ -1.11
SSH1-202ENST00000326495 MYO15BQ96JP2 1530 aa8.11□□□□□ -1.11
SSH1-202ENST00000326495 SYAP1Q96A49 352 aaPredicted RBP8.1□□□□□ -1.11
SSH1-202ENST00000326495 KIF27Q86VH2 1401 aa8.1□□□□□ -1.11
SSH1-202ENST00000326495 CALD1Q05682 793 aaKnown RBP8.1□□□□□ -1.11
SSH1-202ENST00000326495 MCCP23508 829 aa8.09□□□□□ -1.12
SSH1-202ENST00000326495 NUDCQ9Y266 331 aa8.09□□□□□ -1.12
SSH1-202ENST00000326495 TNIKQ9UKE5 1360 aa8.08□□□□□ -1.12
SSH1-202ENST00000326495 KNSTRNQ9Y448 316 aa8.08□□□□□ -1.12
SSH1-202ENST00000326495 NGEFQ8N5V2 710 aa8.08□□□□□ -1.12
SSH1-202ENST00000326495 LAS1LQ9Y4W2 734 aaKnown RBP8.08□□□□□ -1.12
SSH1-202ENST00000326495 CCER2I3L3R5 266 aa8.08□□□□□ -1.12
SSH1-202ENST00000326495 SALL2Q9Y467 1007 aaPredicted RBP8.08□□□□□ -1.12
SSH1-202ENST00000326495 HSCBQ8IWL3 235 aa8.07□□□□□ -1.12
SSH1-202ENST00000326495 CSPP1Q1MSJ5 1256 aa8.07□□□□□ -1.12
SSH1-202ENST00000326495 BAZ1BQ9UIG0 1483 aaKnown RBP8.07□□□□□ -1.12
SSH1-202ENST00000326495 HDGFP51858 240 aaKnown RBP8.07□□□□□ -1.12
SSH1-202ENST00000326495 SUPT16HQ9Y5B9 1047 aaKnown RBP8.07□□□□□ -1.12
SSH1-202ENST00000326495 PHF14O94880 888 aa8.06□□□□□ -1.12
SSH1-202ENST00000326495 ROCK2O75116 1388 aaKnown RBP8.06□□□□□ -1.12
SSH1-202ENST00000326495 HSP90AB1P08238 724 aaKnown RBP8.06□□□□□ -1.12
SSH1-202ENST00000326495 IRX6P78412 446 aaPredicted RBP8.05□□□□□ -1.12
SSH1-202ENST00000326495 HMGB1P1B2RPK0 211 aaPredicted RBP8.04□□□□□ -1.12
SSH1-202ENST00000326495 DEKP35659 375 aaKnown RBP8.04□□□□□ -1.12
SSH1-202ENST00000326495 CHGAP10645 457 aaKnown RBP8.04□□□□□ -1.12
SSH1-202ENST00000326495 KIF3AQ9Y496 699 aa8.04□□□□□ -1.12
SSH1-202ENST00000326495 GBP4Q96PP9 640 aa8.03□□□□□ -1.12
SSH1-202ENST00000326495 KIAA2012Q0VF49 1180 aa8.03□□□□□ -1.12
SSH1-202ENST00000326495 WWC1Q8IX03 1113 aa8.03□□□□□ -1.12
SSH1-202ENST00000326495 SMARCA2P51531 1590 aa8.02□□□□□ -1.13
SSH1-202ENST00000326495 GOLGA6L1Q8N7Z2 621 aa8.02□□□□□ -1.13
SSH1-202ENST00000326495 AAMPQ13685 434 aa8.02□□□□□ -1.13
SSH1-202ENST00000326495 KANK1Q14678 1352 aa8.02□□□□□ -1.13
SSH1-202ENST00000326495 HOMEZQ8IX15 550 aa8.01□□□□□ -1.13
SSH1-202ENST00000326495 WRNQ14191 1432 aaPredicted RBP eCLIP8.01□□□□□ -1.139e-6■■■■■ 50.1
SSH1-202ENST00000326495 EIF3AQ14152 1382 aaKnown RBP8.01□□□□□ -1.13
SSH1-202ENST00000326495 IPO8O15397 1037 aaKnown RBP8.01□□□□□ -1.13
SSH1-202ENST00000326495 CCNB3Q8WWL7 1395 aa8.01□□□□□ -1.13
SSH1-202ENST00000326495 KDM2AQ9Y2K7 1162 aa8.01□□□□□ -1.13
SSH1-202ENST00000326495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8□□□□□ -1.13
SSH1-202ENST00000326495 MTERF4Q7Z6M4 381 aaKnown RBP8□□□□□ -1.13
SSH1-202ENST00000326495 CHIC2Q9UKJ5 165 aa8□□□□□ -1.13
SSH1-202ENST00000326495 MAPK8IP3Q9UPT6 1336 aa8□□□□□ -1.13
SSH1-202ENST00000326495 TPM4P67936 248 aa8□□□□□ -1.13
SSH1-202ENST00000326495 GOLGA6L4A6NEF3 574 aa7.99□□□□□ -1.13
SSH1-202ENST00000326495 A0A0U1RQG5 324 aaPredicted RBP7.99□□□□□ -1.13
SSH1-202ENST00000326495 DHX8Q14562 1220 aaKnown RBP7.99□□□□□ -1.13
SSH1-202ENST00000326495 TCERG1O14776 1098 aaKnown RBP7.98□□□□□ -1.13
SSH1-202ENST00000326495 ARHGAP35Q9NRY4 1499 aa7.98□□□□□ -1.13
SSH1-202ENST00000326495 RSPH6AQ9H0K4 717 aa7.98□□□□□ -1.13
SSH1-202ENST00000326495 RBM19Q9Y4C8 960 aaKnown RBP7.98□□□□□ -1.13
SSH1-202ENST00000326495 FMN1Q68DA7 1419 aa7.98□□□□□ -1.13
SSH1-202ENST00000326495 PDE3BQ13370 1112 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms