RNA–Protein interactions for RNA: ENST00000323456.9

MTMR4-201, Transcript of myotubularin related protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTMR4, Length 5,839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTMR4-201ENST00000323456 NPM2Q86SE8 214 aaKnown RBP14.06□□□□□ -0.16
MTMR4-201ENST00000323456 SMARCA4P51532 1647 aa14.05□□□□□ -0.16
MTMR4-201ENST00000323456 SIN3AQ96ST3 1273 aa14.05□□□□□ -0.16
MTMR4-201ENST00000323456 SMARCA2P51531 1590 aa14.04□□□□□ -0.16
MTMR4-201ENST00000323456 SLC24A1O60721 1099 aa14.01□□□□□ -0.17
MTMR4-201ENST00000323456 SENP3-EIF4A1A0A087X0R7 540 aa14.01□□□□□ -0.17
MTMR4-201ENST00000323456 SENP3Q9H4L4 574 aaPredicted RBP14.01□□□□□ -0.17
MTMR4-201ENST00000323456 PLPPR3Q6T4P5 718 aa14.01□□□□□ -0.17
MTMR4-201ENST00000323456 MRS2Q9HD23 443 aa14□□□□□ -0.17
MTMR4-201ENST00000323456 CARMIL1Q5VZK9 1371 aa14□□□□□ -0.17
MTMR4-201ENST00000323456 KANK4Q5T7N3 995 aaPredicted RBP13.99□□□□□ -0.17
MTMR4-201ENST00000323456 KCNH8Q96L42 1107 aa13.99□□□□□ -0.17
MTMR4-201ENST00000323456 TSPY4P0CV99 314 aa13.99□□□□□ -0.17
MTMR4-201ENST00000323456 TSPY10P0CW01 314 aa13.99□□□□□ -0.17
MTMR4-201ENST00000323456 VPS8Q8N3P4 1428 aa13.98□□□□□ -0.17
MTMR4-201ENST00000323456 CCNB3Q8WWL7 1395 aa13.97□□□□□ -0.17
MTMR4-201ENST00000323456 RUSC2Q8N2Y8 1516 aa13.97□□□□□ -0.17
MTMR4-201ENST00000323456 ERCC6Q03468 1493 aa13.96□□□□□ -0.17
MTMR4-201ENST00000323456 TMC1Q8TDI8 760 aa13.96□□□□□ -0.17
MTMR4-201ENST00000323456 EIF4G2P78344 907 aaKnown RBP eCLIP13.96□□□□□ -0.18
MTMR4-201ENST00000323456 ANP32AP39687 249 aaKnown RBP13.95□□□□□ -0.18
MTMR4-201ENST00000323456 STAG3Q9UJ98 1225 aa13.93□□□□□ -0.18
MTMR4-201ENST00000323456 NPM1P06748 294 aaKnown RBP eCLIP13.91□□□□□ -0.18
MTMR4-201ENST00000323456 RAPGEF2Q9Y4G8 1499 aa13.91□□□□□ -0.18
MTMR4-201ENST00000323456 RGL3Q3MIN7 710 aa13.9□□□□□ -0.18
MTMR4-201ENST00000323456 CFDP1Q9UEE9 299 aaPredicted RBP13.9□□□□□ -0.18
MTMR4-201ENST00000323456 PLEKHD1A6NEE1 506 aa13.9□□□□□ -0.18
MTMR4-201ENST00000323456 NEFMP07197 916 aa13.9□□□□□ -0.18
MTMR4-201ENST00000323456 ZBTB47Q9UFB7 747 aaPredicted RBP13.9□□□□□ -0.18
MTMR4-201ENST00000323456 FHAD1B1AJZ9 1412 aa13.9□□□□□ -0.18
MTMR4-201ENST00000323456 ARHGAP35Q9NRY4 1499 aa13.88□□□□□ -0.19
MTMR4-201ENST00000323456 ATAD2BQ9ULI0 1458 aa13.87□□□□□ -0.19
MTMR4-201ENST00000323456 WDR43Q15061 677 aaKnown RBP eCLIP13.86□□□□□ -0.19
MTMR4-201ENST00000323456 CCDC136Q96JN2 1154 aa13.86□□□□□ -0.19
MTMR4-201ENST00000323456 ESF1Q9H501 851 aaKnown RBP13.86□□□□□ -0.19
MTMR4-201ENST00000323456 SETD5Q9C0A6 1442 aa13.85□□□□□ -0.19
MTMR4-201ENST00000323456 FOXD1Q16676 465 aa13.81□□□□□ -0.2
MTMR4-201ENST00000323456 TDRD9Q8NDG6 1382 aaKnown RBP13.81□□□□□ -0.2
MTMR4-201ENST00000323456 RAB3GAP2Q9H2M9 1393 aa13.81□□□□□ -0.2
MTMR4-201ENST00000323456 CARD11Q9BXL7 1154 aa13.8□□□□□ -0.2
MTMR4-201ENST00000323456 FHOD3Q2V2M9 1422 aa13.8□□□□□ -0.2
MTMR4-201ENST00000323456 NBR1Q14596 966 aa13.79□□□□□ -0.2
MTMR4-201ENST00000323456 SUPT16HQ9Y5B9 1047 aaKnown RBP13.79□□□□□ -0.2
MTMR4-201ENST00000323456 CADPSQ9ULU8 1353 aa13.72□□□□□ -0.21
MTMR4-201ENST00000323456 CC2D1BQ5T0F9 858 aaKnown RBP13.72□□□□□ -0.21
MTMR4-201ENST00000323456 HSPA5P11021 654 aaKnown RBP13.72□□□□□ -0.21
MTMR4-201ENST00000323456 PDS5BQ9NTI5 1447 aa13.71□□□□□ -0.21
MTMR4-201ENST00000323456 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.7□□□□□ -0.22
MTMR4-201ENST00000323456 DCAF11Q8TEB1 546 aa13.68□□□□□ -0.22
MTMR4-201ENST00000323456 FMN1Q68DA7 1419 aa13.68□□□□□ -0.22
MTMR4-201ENST00000323456 FANCD2Q9BXW9 1451 aa13.67□□□□□ -0.22
MTMR4-201ENST00000323456 PLEKHG5O94827 1062 aa13.66□□□□□ -0.22
MTMR4-201ENST00000323456 KNSTRNQ9Y448 316 aa13.65□□□□□ -0.22
MTMR4-201ENST00000323456 SYNJ1O43426 1573 aa13.63□□□□□ -0.23
MTMR4-201ENST00000323456 TNNT2P45379 298 aaPredicted RBP13.63□□□□□ -0.23
MTMR4-201ENST00000323456 DHX57Q6P158 1386 aaKnown RBP13.63□□□□□ -0.23
MTMR4-201ENST00000323456 ZBTB7CA1YPR0 619 aa13.63□□□□□ -0.23
MTMR4-201ENST00000323456 PPP1R15AO75807 674 aaPredicted RBP13.63□□□□□ -0.23
MTMR4-201ENST00000323456 MPHOSPH9Q99550 1183 aa13.63□□□□□ -0.23
MTMR4-201ENST00000323456 PKD2Q13563 968 aa13.63□□□□□ -0.23
MTMR4-201ENST00000323456 UPF2Q9HAU5 1272 aaKnown RBP13.63□□□□□ -0.23
MTMR4-201ENST00000323456 FGD5Q6ZNL6 1462 aa13.62□□□□□ -0.23
MTMR4-201ENST00000323456 KIF21BO75037 1637 aa13.61□□□□□ -0.23
MTMR4-201ENST00000323456 HSP90AA1P07900 732 aaKnown RBP13.61□□□□□ -0.23
MTMR4-201ENST00000323456 ARXQ96QS3 562 aa13.61□□□□□ -0.23
MTMR4-201ENST00000323456 RAD54L2Q9Y4B4 1467 aa13.61□□□□□ -0.23
MTMR4-201ENST00000323456 NEUROD2Q15784 382 aa13.6□□□□□ -0.23
MTMR4-201ENST00000323456 B4GALNT3Q6L9W6 998 aa13.58□□□□□ -0.23
MTMR4-201ENST00000323456 PPM1GO15355 546 aaPredicted RBP13.58□□□□□ -0.24
MTMR4-201ENST00000323456 CARMIL2Q6F5E8 1435 aa13.57□□□□□ -0.24
MTMR4-201ENST00000323456 CCER2I3L3R5 266 aa13.55□□□□□ -0.24
MTMR4-201ENST00000323456 C14orf37Q86TY3 774 aa13.55□□□□□ -0.24
MTMR4-201ENST00000323456 TIMELESSQ9UNS1 1208 aa13.55□□□□□ -0.24
MTMR4-201ENST00000323456 ARID4BQ4LE39 1312 aaPredicted RBP13.55□□□□□ -0.24
MTMR4-201ENST00000323456 HNRNPMP52272 730 aaKnown RBP eCLIP13.55□□□□□ -0.24
MTMR4-201ENST00000323456 PPP4R2Q9NY27 417 aa13.55□□□□□ -0.24
MTMR4-201ENST00000323456 CDCA8Q53HL2 280 aa13.54□□□□□ -0.24
MTMR4-201ENST00000323456 ROCK2O75116 1388 aaKnown RBP13.54□□□□□ -0.24
MTMR4-201ENST00000323456 NUP155O75694 1391 aa13.53□□□□□ -0.24
MTMR4-201ENST00000323456 TMF1P82094 1093 aa13.53□□□□□ -0.24
MTMR4-201ENST00000323456 LAS1LQ9Y4W2 734 aaKnown RBP13.52□□□□□ -0.24
MTMR4-201ENST00000323456 CCDC18Q5T9S5 1454 aa13.51□□□□□ -0.25
MTMR4-201ENST00000323456 KANK1Q14678 1352 aa13.51□□□□□ -0.25
MTMR4-201ENST00000323456 CFAP53Q96M91 514 aa13.51□□□□□ -0.25
MTMR4-201ENST00000323456 IGF1RP08069 1367 aa13.51□□□□□ -0.25
MTMR4-201ENST00000323456 L3MBTL2Q969R5 705 aa13.5□□□□□ -0.25
MTMR4-201ENST00000323456 PRDM2Q13029 1718 aa13.5□□□□□ -0.25
MTMR4-201ENST00000323456 ANKRD30AQ9BXX3 1397 aa13.5□□□□□ -0.25
MTMR4-201ENST00000323456 SAFB2Q14151 953 aaKnown RBP eCLIP13.5□□□□□ -0.25
MTMR4-201ENST00000323456 FRAT1Q92837 279 aaPredicted RBP13.49□□□□□ -0.25
MTMR4-201ENST00000323456 POGKQ9P215 609 aa13.49□□□□□ -0.25
MTMR4-201ENST00000323456 ANP32EQ9BTT0 268 aa13.48□□□□□ -0.25
MTMR4-201ENST00000323456 MYH16Q9H6N6 1097 aa13.48□□□□□ -0.25
MTMR4-201ENST00000323456 GAPVD1Q14C86 1478 aa13.47□□□□□ -0.25
MTMR4-201ENST00000323456 RGS3P49796 1198 aa13.46□□□□□ -0.25
MTMR4-201ENST00000323456 MLECQ14165 292 aa13.46□□□□□ -0.25
MTMR4-201ENST00000323456 FTSJ3Q8IY81 847 aaKnown RBP13.46□□□□□ -0.25
MTMR4-201ENST00000323456 KTN1Q86UP2 1357 aaKnown RBP13.45□□□□□ -0.26
MTMR4-201ENST00000323456 ARAP1Q96P48 1450 aa13.45□□□□□ -0.26
MTMR4-201ENST00000323456 DDRGK1Q96HY6 314 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms