RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 CHIC2Q9UKJ5 165 aa25.05■■□□□ 1.6
UBE2N-201ENST00000318066 PPM1GO15355 546 aaPredicted RBP25.04■■□□□ 1.6
UBE2N-201ENST00000318066 TRIM44Q96DX7 344 aaPredicted RBP25.03■■□□□ 1.6
UBE2N-201ENST00000318066 CDCA8Q53HL2 280 aa25.01■■□□□ 1.59
UBE2N-201ENST00000318066 CCDC180Q9P1Z9 1646 aa24.98■■□□□ 1.59
UBE2N-201ENST00000318066 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.96■■□□□ 1.59
UBE2N-201ENST00000318066 GOLGA3Q08378 1498 aa24.95■■□□□ 1.59
UBE2N-201ENST00000318066 KDM2AQ9Y2K7 1162 aa24.93■■□□□ 1.58
UBE2N-201ENST00000318066 ERICH6BQ5W0A0 696 aa24.93■■□□□ 1.58
UBE2N-201ENST00000318066 CDK11BP21127 795 aaKnown RBP24.91■■□□□ 1.58
UBE2N-201ENST00000318066 CFAP53Q96M91 514 aa24.91■■□□□ 1.58
UBE2N-201ENST00000318066 TNNT2P45379 298 aaPredicted RBP24.88■■□□□ 1.57
UBE2N-201ENST00000318066 ARXQ96QS3 562 aa24.84■■□□□ 1.57
UBE2N-201ENST00000318066 IRX6P78412 446 aaPredicted RBP24.84■■□□□ 1.57
UBE2N-201ENST00000318066 CHMP4BQ9H444 224 aaKnown RBP24.84■■□□□ 1.57
UBE2N-201ENST00000318066 PPP4R2Q9NY27 417 aa24.83■■□□□ 1.57
UBE2N-201ENST00000318066 CEP162Q5TB80 1403 aa24.83■■□□□ 1.57
UBE2N-201ENST00000318066 CASC1Q6TDU7 716 aa24.83■■□□□ 1.57
UBE2N-201ENST00000318066 TNIKQ9UKE5 1360 aa24.77■■□□□ 1.56
UBE2N-201ENST00000318066 KNSTRNQ9Y448 316 aa24.77■■□□□ 1.56
UBE2N-201ENST00000318066 MS4A1P11836 297 aa24.77■■□□□ 1.56
UBE2N-201ENST00000318066 TIMELESSQ9UNS1 1208 aa24.77■■□□□ 1.56
UBE2N-201ENST00000318066 ZRSR1Q15695 479 aaKnown RBP24.74■■□□□ 1.55
UBE2N-201ENST00000318066 RRP7BPQ9NSQ0 103 aa24.74■■□□□ 1.55
UBE2N-201ENST00000318066 PLEKHD1A6NEE1 506 aa24.73■■□□□ 1.55
UBE2N-201ENST00000318066 CHMP7Q8WUX9 453 aaPredicted RBP24.72■■□□□ 1.55
UBE2N-201ENST00000318066 PTMAP06454 111 aaKnown RBP24.71■■□□□ 1.55
UBE2N-201ENST00000318066 CEP164Q9UPV0 1460 aa24.69■■□□□ 1.54
UBE2N-201ENST00000318066 SUPT16HQ9Y5B9 1047 aaKnown RBP24.69■■□□□ 1.54
UBE2N-201ENST00000318066 HIRIP3Q9BW71 556 aaPredicted RBP24.68■■□□□ 1.54
UBE2N-201ENST00000318066 FTSJ3Q8IY81 847 aaKnown RBP24.67■■□□□ 1.54
UBE2N-201ENST00000318066 NUDCQ9Y266 331 aa24.66■■□□□ 1.54
UBE2N-201ENST00000318066 NOP58Q9Y2X3 529 aaKnown RBP24.64■■□□□ 1.53
UBE2N-201ENST00000318066 CARD11Q9BXL7 1154 aa24.63■■□□□ 1.53
UBE2N-201ENST00000318066 KIF27Q86VH2 1401 aa24.62■■□□□ 1.53
UBE2N-201ENST00000318066 WRNQ14191 1432 aaPredicted RBP eCLIP24.61■■□□□ 1.53
UBE2N-201ENST00000318066 PPP1R15AO75807 674 aaPredicted RBP24.6■■□□□ 1.53
UBE2N-201ENST00000318066 MAPK8IP3Q9UPT6 1336 aa24.59■■□□□ 1.53
UBE2N-201ENST00000318066 CFAP44Q96MT7 982 aa24.59■■□□□ 1.53
UBE2N-201ENST00000318066 PNNQ9H307 717 aaKnown RBP24.58■■□□□ 1.53
UBE2N-201ENST00000318066 DNTTIP2Q5QJE6 756 aaKnown RBP24.58■■□□□ 1.53
UBE2N-201ENST00000318066 CCER2I3L3R5 266 aa24.57■■□□□ 1.52
UBE2N-201ENST00000318066 CFDP1Q9UEE9 299 aaPredicted RBP24.57■■□□□ 1.52
UBE2N-201ENST00000318066 NRDCO43847 1150 aa24.55■■□□□ 1.52
UBE2N-201ENST00000318066 GOLGA6L6A8MZA4 724 aa24.54■■□□□ 1.52
UBE2N-201ENST00000318066 RB1CC1Q8TDY2 1594 aa24.5■■□□□ 1.51
UBE2N-201ENST00000318066 RGL3Q3MIN7 710 aa24.5■■□□□ 1.51
UBE2N-201ENST00000318066 L1TD1Q5T7N2 865 aaKnown RBP24.5■■□□□ 1.51
UBE2N-201ENST00000318066 FHAD1B1AJZ9 1412 aa24.48■■□□□ 1.51
UBE2N-201ENST00000318066 NAP1L5Q96NT1 182 aaPredicted RBP24.46■■□□□ 1.51
UBE2N-201ENST00000318066 HAP1P54257 671 aaPredicted RBP24.45■■□□□ 1.51
UBE2N-201ENST00000318066 HSP90AB1P08238 724 aaKnown RBP24.44■■□□□ 1.5
UBE2N-201ENST00000318066 MYO15BQ96JP2 1530 aa24.44■■□□□ 1.5
UBE2N-201ENST00000318066 CCNB3Q8WWL7 1395 aa24.41■■□□□ 1.5
UBE2N-201ENST00000318066 RGS3P49796 1198 aa24.41■■□□□ 1.5
UBE2N-201ENST00000318066 PTMSP20962 102 aa24.4■■□□□ 1.5
UBE2N-201ENST00000318066 TMF1P82094 1093 aa24.4■■□□□ 1.5
UBE2N-201ENST00000318066 PLPPR3Q6T4P5 718 aa24.39■■□□□ 1.5
UBE2N-201ENST00000318066 HSCBQ8IWL3 235 aa24.39■■□□□ 1.5
UBE2N-201ENST00000318066 LAS1LQ9Y4W2 734 aaKnown RBP24.39■■□□□ 1.49
UBE2N-201ENST00000318066 C14orf37Q86TY3 774 aa24.38■■□□□ 1.49
UBE2N-201ENST00000318066 CHAF1AQ13111 956 aaPredicted RBP24.37■■□□□ 1.49
UBE2N-201ENST00000318066 KCNH8Q96L42 1107 aa24.35■■□□□ 1.49
UBE2N-201ENST00000318066 FRAT1Q92837 279 aaPredicted RBP24.34■■□□□ 1.49
UBE2N-201ENST00000318066 NACADO15069 1562 aa24.33■■□□□ 1.49
UBE2N-201ENST00000318066 MCCP23508 829 aa24.32■■□□□ 1.48
UBE2N-201ENST00000318066 BAZ1BQ9UIG0 1483 aaKnown RBP24.31■■□□□ 1.48
UBE2N-201ENST00000318066 RTN4Q9NQC3 1192 aaKnown RBP24.31■■□□□ 1.48
UBE2N-201ENST00000318066 NEUROD2Q15784 382 aa24.31■■□□□ 1.48
UBE2N-201ENST00000318066 SIN3AQ96ST3 1273 aa24.3■■□□□ 1.48
UBE2N-201ENST00000318066 POGKQ9P215 609 aa24.3■■□□□ 1.48
UBE2N-201ENST00000318066 GOLGA6L4A6NEF3 574 aa24.28■■□□□ 1.48
UBE2N-201ENST00000318066 DEKP35659 375 aaKnown RBP24.28■■□□□ 1.48
UBE2N-201ENST00000318066 ZBTB7CA1YPR0 619 aa24.28■■□□□ 1.48
UBE2N-201ENST00000318066 B4GALNT3Q6L9W6 998 aa24.28■■□□□ 1.48
UBE2N-201ENST00000318066 MSNP26038 577 aaKnown RBP24.28■■□□□ 1.48
UBE2N-201ENST00000318066 ARID4BQ4LE39 1312 aaPredicted RBP24.27■■□□□ 1.48
UBE2N-201ENST00000318066 FGD1P98174 961 aa24.27■■□□□ 1.48
UBE2N-201ENST00000318066 KCNJ4P48050 445 aa24.24■■□□□ 1.47
UBE2N-201ENST00000318066 PLCB2Q00722 1185 aa24.24■■□□□ 1.47
UBE2N-201ENST00000318066 KANK1Q14678 1352 aa24.23■■□□□ 1.47
UBE2N-201ENST00000318066 OS9Q13438 667 aaPredicted RBP24.23■■□□□ 1.47
UBE2N-201ENST00000318066 A0A0G2JS52 829 aa24.22■■□□□ 1.47
UBE2N-201ENST00000318066 SETD5Q9C0A6 1442 aa24.22■■□□□ 1.47
UBE2N-201ENST00000318066 TCERG1O14776 1098 aaKnown RBP24.22■■□□□ 1.47
UBE2N-201ENST00000318066 IPO8O15397 1037 aaKnown RBP24.21■■□□□ 1.47
UBE2N-201ENST00000318066 RBM19Q9Y4C8 960 aaKnown RBP24.2■■□□□ 1.46
UBE2N-201ENST00000318066 CC2D1BQ5T0F9 858 aaKnown RBP24.19■■□□□ 1.46
UBE2N-201ENST00000318066 GBP4Q96PP9 640 aa24.19■■□□□ 1.46
UBE2N-201ENST00000318066 U2SURPO15042 1029 aaKnown RBP24.18■■□□□ 1.46
UBE2N-201ENST00000318066 HDGFP51858 240 aaKnown RBP24.18■■□□□ 1.46
UBE2N-201ENST00000318066 KTN1Q86UP2 1357 aaKnown RBP24.17■■□□□ 1.46
UBE2N-201ENST00000318066 CALD1Q05682 793 aaKnown RBP24.16■■□□□ 1.46
UBE2N-201ENST00000318066 RALBP1Q15311 655 aa24.16■■□□□ 1.46
UBE2N-201ENST00000318066 CHMP4AQ9BY43 222 aa24.16■■□□□ 1.46
UBE2N-201ENST00000318066 BAZ1AQ9NRL2 1556 aaPredicted RBP24.15■■□□□ 1.46
UBE2N-201ENST00000318066 DCAF11Q8TEB1 546 aa24.14■■□□□ 1.45
UBE2N-201ENST00000318066 VPS8Q8N3P4 1428 aa24.14■■□□□ 1.45
UBE2N-201ENST00000318066 MORC1Q86VD1 984 aa24.11■■□□□ 1.45
UBE2N-201ENST00000318066 RWDD1Q9H446 243 aaPredicted RBP24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms