RNA–Protein interactions for RNA: ENST00000302401.8

SMARCA2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2 BASIC

Gene SMARCA2, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-201ENST00000302401 ABCB7O75027 752 aa9.56□□□□□ -0.88
SMARCA2-201ENST00000302401 TRHP20396 242 aaPredicted RBP9.55□□□□□ -0.88
SMARCA2-201ENST00000302401 MIER1Q8N108 512 aa9.54□□□□□ -0.88
SMARCA2-201ENST00000302401 NKX1-1Q15270 411 aaPredicted RBP9.52□□□□□ -0.88
SMARCA2-201ENST00000302401 PLSCR2Q9NRY7 297 aa9.52□□□□□ -0.88
SMARCA2-201ENST00000302401 TRIM41Q8WV44 630 aa9.51□□□□□ -0.89
SMARCA2-201ENST00000302401 GTPBP6O43824 516 aaPredicted RBP9.51□□□□□ -0.89
SMARCA2-201ENST00000302401 RNF25Q96BH1 459 aaPredicted RBP9.48□□□□□ -0.89
SMARCA2-201ENST00000302401 HAX1O00165 279 aa9.47□□□□□ -0.89
SMARCA2-201ENST00000302401 ZBTB12Q9Y330 459 aaPredicted RBP9.47□□□□□ -0.89
SMARCA2-201ENST00000302401 ZNF692Q9BU19 519 aaPredicted RBP9.43□□□□□ -0.9
SMARCA2-201ENST00000302401 SUPT5HO00267 1087 aaKnown RBP9.42□□□□□ -0.9
SMARCA2-201ENST00000302401 ZBTB47Q9UFB7 747 aaPredicted RBP9.42□□□□□ -0.9
SMARCA2-201ENST00000302401 BRPF1P55201 1214 aaPredicted RBP9.4□□□□□ -0.9
SMARCA2-201ENST00000302401 SSUH2Q9Y2M2 353 aa9.39□□□□□ -0.91
SMARCA2-201ENST00000302401 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMARCA2-201ENST00000302401 LMOD2Q6P5Q4 547 aa9.37□□□□□ -0.91
SMARCA2-201ENST00000302401 NPM2Q86SE8 214 aaKnown RBP9.37□□□□□ -0.91
SMARCA2-201ENST00000302401 P3H3Q8IVL6 736 aa9.36□□□□□ -0.91
SMARCA2-201ENST00000302401 PLEKHG5O94827 1062 aa9.36□□□□□ -0.91
SMARCA2-201ENST00000302401 PABPN1Q86U42 306 aaKnown RBP eCLIP9.35□□□□□ -0.91
SMARCA2-201ENST00000302401 PIP4P2Q8N4L2 257 aa9.35□□□□□ -0.91
SMARCA2-201ENST00000302401 RIOK3O14730 519 aaKnown RBP9.35□□□□□ -0.91
SMARCA2-201ENST00000302401 LHX8Q68G74 356 aa9.33□□□□□ -0.92
SMARCA2-201ENST00000302401 GSE1Q14687 1217 aa9.33□□□□□ -0.92
SMARCA2-201ENST00000302401 PELP1Q8IZL8 1130 aaKnown RBP9.33□□□□□ -0.92
SMARCA2-201ENST00000302401 SPDYE2BA6NHP3 402 aa9.32□□□□□ -0.92
SMARCA2-201ENST00000302401 SPDYE6P0CI01 402 aa9.32□□□□□ -0.92
SMARCA2-201ENST00000302401 SPDYE2Q495Y8 402 aa9.32□□□□□ -0.92
SMARCA2-201ENST00000302401 STK25O00506 426 aa9.31□□□□□ -0.92
SMARCA2-201ENST00000302401 TRIM26Q12899 539 aaPredicted RBP9.3□□□□□ -0.92
SMARCA2-201ENST00000302401 AKT1S1Q96B36 256 aa9.29□□□□□ -0.92
SMARCA2-201ENST00000302401 TTBK1Q5TCY1 1321 aaPredicted RBP9.29□□□□□ -0.92
SMARCA2-201ENST00000302401 KCNV2Q8TDN2 545 aa9.28□□□□□ -0.92
SMARCA2-201ENST00000302401 VGFO15240 615 aaPredicted RBP9.26□□□□□ -0.93
SMARCA2-201ENST00000302401 OSCARQ8IYS5 282 aa9.26□□□□□ -0.93
SMARCA2-201ENST00000302401 RYDENQ9NUL5 291 aaKnown RBP9.26□□□□□ -0.93
SMARCA2-201ENST00000302401 NEUROD2Q15784 382 aa9.25□□□□□ -0.93
SMARCA2-201ENST00000302401 UBTFP17480 764 aaKnown RBP9.25□□□□□ -0.93
SMARCA2-201ENST00000302401 NUBP1P53384 320 aa9.24□□□□□ -0.93
SMARCA2-201ENST00000302401 ZC3H15Q8WU90 426 aaKnown RBP9.23□□□□□ -0.93
SMARCA2-201ENST00000302401 HRCP23327 699 aa9.21□□□□□ -0.93
SMARCA2-201ENST00000302401 SGIP1Q9BQI5 828 aa9.21□□□□□ -0.93
SMARCA2-201ENST00000302401 DCAF8Q5TAQ9 597 aa9.2□□□□□ -0.94
SMARCA2-201ENST00000302401 BCL11BQ9C0K0 894 aaPredicted RBP9.2□□□□□ -0.94
SMARCA2-201ENST00000302401 WDR70Q9NW82 654 aa9.2□□□□□ -0.94
SMARCA2-201ENST00000302401 STK24Q9Y6E0 443 aa9.19□□□□□ -0.94
SMARCA2-201ENST00000302401 SLC24A3Q9HC58 644 aa9.19□□□□□ -0.94
SMARCA2-201ENST00000302401 CADPS2Q86UW7 1296 aa9.18□□□□□ -0.94
SMARCA2-201ENST00000302401 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.17□□□□□ -0.94
SMARCA2-201ENST00000302401 ZFP91Q96JP5 570 aaPredicted RBP9.17□□□□□ -0.94
SMARCA2-201ENST00000302401 FXR2P51116 673 aaKnown RBP eCLIP9.16□□□□□ -0.94
SMARCA2-201ENST00000302401 MYT1Q01538 1121 aa9.16□□□□□ -0.94
SMARCA2-201ENST00000302401 CHRM1P11229 460 aaPredicted RBP9.15□□□□□ -0.95
SMARCA2-201ENST00000302401 EVX2Q03828 476 aa9.15□□□□□ -0.95
SMARCA2-201ENST00000302401 REM2Q8IYK8 340 aaPredicted RBP9.14□□□□□ -0.95
SMARCA2-201ENST00000302401 ZMYND15Q9H091 742 aa9.11□□□□□ -0.95
SMARCA2-201ENST00000302401 ARHGEF1Q92888 912 aaKnown RBP9.09□□□□□ -0.95
SMARCA2-201ENST00000302401 FAM212AQ96EL1 285 aa9.09□□□□□ -0.95
SMARCA2-201ENST00000302401 TESPA1A2RU30 521 aaPredicted RBP9.07□□□□□ -0.96
SMARCA2-201ENST00000302401 ZMYND10O75800 440 aa9.07□□□□□ -0.96
SMARCA2-201ENST00000302401 RSPH6AQ9H0K4 717 aa9.07□□□□□ -0.96
SMARCA2-201ENST00000302401 SEMA3EO15041 775 aa9.05□□□□□ -0.96
SMARCA2-201ENST00000302401 PITPNM1O00562 1244 aa9.04□□□□□ -0.96
SMARCA2-201ENST00000302401 GABBR2O75899 941 aa8.99□□□□□ -0.97
SMARCA2-201ENST00000302401 MNX1P50219 401 aaPredicted RBP8.99□□□□□ -0.97
SMARCA2-201ENST00000302401 E2F4Q16254 413 aa8.99□□□□□ -0.97
SMARCA2-201ENST00000302401 RASEFQ8IZ41 740 aa8.99□□□□□ -0.97
SMARCA2-201ENST00000302401 BARGINQ6ZT62 677 aa8.99□□□□□ -0.97
SMARCA2-201ENST00000302401 PYGBP11216 843 aa8.98□□□□□ -0.97
SMARCA2-201ENST00000302401 C1orf115Q9H7X2 142 aa8.97□□□□□ -0.97
SMARCA2-201ENST00000302401 GPBP1L1Q9HC44 474 aaPredicted RBP8.97□□□□□ -0.97
SMARCA2-201ENST00000302401 LOC105371045A0A1W2PR82 267 aa8.96□□□□□ -0.97
SMARCA2-201ENST00000302401 ARID3AQ99856 593 aa8.96□□□□□ -0.98
SMARCA2-201ENST00000302401 IL27Q8NEV9 243 aa8.95□□□□□ -0.98
SMARCA2-201ENST00000302401 CREBZFQ9NS37 354 aa8.94□□□□□ -0.98
SMARCA2-201ENST00000302401 AK7Q96M32 723 aa8.93□□□□□ -0.98
SMARCA2-201ENST00000302401 SMYD5Q6GMV2 418 aa8.92□□□□□ -0.98
SMARCA2-201ENST00000302401 C19orf67A6NJJ6 358 aa8.92□□□□□ -0.98
SMARCA2-201ENST00000302401 MFRPQ9BY79 579 aa8.91□□□□□ -0.98
SMARCA2-201ENST00000302401 EIF5BO60841 1220 aaKnown RBP8.9□□□□□ -0.98
SMARCA2-201ENST00000302401 KDM4CQ9H3R0 1056 aa8.9□□□□□ -0.98
SMARCA2-201ENST00000302401 PCDH10Q9P2E7 1040 aa8.88□□□□□ -0.99
SMARCA2-201ENST00000302401 PPP1R37O75864 691 aa8.87□□□□□ -0.99
SMARCA2-201ENST00000302401 MKRN3Q13064 507 aaKnown RBP8.86□□□□□ -0.99
SMARCA2-201ENST00000302401 CCDC9Q9Y3X0 531 aaKnown RBP8.85□□□□□ -0.99
SMARCA2-201ENST00000302401 ARID3CA6NKF2 412 aa8.85□□□□□ -0.99
SMARCA2-201ENST00000302401 PDAP1Q13442 181 aaKnown RBP8.84□□□□□ -0.99
SMARCA2-201ENST00000302401 ZNF467Q7Z7K2 595 aaPredicted RBP8.84□□□□□ -0.99
SMARCA2-201ENST00000302401 ARIH1Q9Y4X5 557 aaPredicted RBP8.84□□□□□ -0.99
SMARCA2-201ENST00000302401 APBB1O00213 710 aa8.83□□□□□ -1
SMARCA2-201ENST00000302401 POTEMA6NI47 508 aa8.82□□□□□ -1
SMARCA2-201ENST00000302401 KRI1Q8N9T8 703 aaKnown RBP8.82□□□□□ -1
SMARCA2-201ENST00000302401 TRIM66O15016 1216 aa8.82□□□□□ -1
SMARCA2-201ENST00000302401 SPDYE1Q8NFV5 336 aaPredicted RBP8.82□□□□□ -1
SMARCA2-201ENST00000302401 ZBTB7CA1YPR0 619 aa8.81□□□□□ -1
SMARCA2-201ENST00000302401 PDIA4P13667 645 aaKnown RBP8.81□□□□□ -1
SMARCA2-201ENST00000302401 PRKAR2AP13861 404 aaKnown RBP8.81□□□□□ -1
SMARCA2-201ENST00000302401 PDE4DQ08499 809 aa8.81□□□□□ -1
SMARCA2-201ENST00000302401 NCKAP5LQ9HCH0 1330 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms