RNA–Protein interactions for RNA: ENST00000297819.3

SSMEM1-201, Transcript of serine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSMEM1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1-201ENST00000297819 RASEFQ8IZ41 740 aa11.75□□□□□ -0.53
SSMEM1-201ENST00000297819 PHF12Q96QT6 1004 aa11.75□□□□□ -0.53
SSMEM1-201ENST00000297819 NUBP1P53384 320 aa11.73□□□□□ -0.53
SSMEM1-201ENST00000297819 DCBLD2Q96PD2 775 aa11.73□□□□□ -0.53
SSMEM1-201ENST00000297819 CCDC61Q9Y6R9 512 aa11.73□□□□□ -0.53
SSMEM1-201ENST00000297819 KLHL34Q8N239 644 aa11.69□□□□□ -0.54
SSMEM1-201ENST00000297819 GALR2O43603 387 aaPredicted RBP11.68□□□□□ -0.54
SSMEM1-201ENST00000297819 FAM212AQ96EL1 285 aa11.68□□□□□ -0.54
SSMEM1-201ENST00000297819 KIF12Q96FN5 646 aa11.64□□□□□ -0.55
SSMEM1-201ENST00000297819 OTUD5Q96G74 571 aa11.61□□□□□ -0.55
SSMEM1-201ENST00000297819 MS4A3Q96HJ5 214 aa11.61□□□□□ -0.55
SSMEM1-201ENST00000297819 DCAF8Q5TAQ9 597 aa11.59□□□□□ -0.55
SSMEM1-201ENST00000297819 IFNLR1Q8IU57 520 aaPredicted RBP11.59□□□□□ -0.55
SSMEM1-201ENST00000297819 SGIP1Q9BQI5 828 aa11.59□□□□□ -0.55
SSMEM1-201ENST00000297819 MAP3K13O43283 966 aa11.57□□□□□ -0.56
SSMEM1-201ENST00000297819 GSE1Q14687 1217 aa11.56□□□□□ -0.56
SSMEM1-201ENST00000297819 SPOCK2Q92563 424 aa11.56□□□□□ -0.56
SSMEM1-201ENST00000297819 POTEB2H3BUK9 544 aa11.55□□□□□ -0.56
SSMEM1-201ENST00000297819 PCDHB13Q9Y5F0 798 aa11.51□□□□□ -0.57
SSMEM1-201ENST00000297819 POTEMA6NI47 508 aa11.5□□□□□ -0.57
SSMEM1-201ENST00000297819 ASTLQ6HA08 431 aaPredicted RBP11.5□□□□□ -0.57
SSMEM1-201ENST00000297819 ATMINO43313 823 aaPredicted RBP11.47□□□□□ -0.57
SSMEM1-201ENST00000297819 TIE1P35590 1138 aa11.47□□□□□ -0.57
SSMEM1-201ENST00000297819 PYGBP11216 843 aa11.46□□□□□ -0.57
SSMEM1-201ENST00000297819 CHRM1P11229 460 aaPredicted RBP11.45□□□□□ -0.58
SSMEM1-201ENST00000297819 POTEGQ6S5H5 508 aa11.44□□□□□ -0.58
SSMEM1-201ENST00000297819 IFNL1Q8IU54 200 aa11.44□□□□□ -0.58
SSMEM1-201ENST00000297819 BMP2KQ9NSY1 1161 aaPredicted RBP11.43□□□□□ -0.58
SSMEM1-201ENST00000297819 PELP1Q8IZL8 1130 aaKnown RBP11.42□□□□□ -0.58
SSMEM1-201ENST00000297819 SLC39A7Q92504 469 aa11.41□□□□□ -0.58
SSMEM1-201ENST00000297819 CIZ1Q9ULV3 898 aaPredicted RBP11.41□□□□□ -0.58
SSMEM1-201ENST00000297819 TRPC6Q9Y210 931 aa11.41□□□□□ -0.58
SSMEM1-201ENST00000297819 C7P10643 843 aa11.4□□□□□ -0.58
SSMEM1-201ENST00000297819 ATN1P54259 1190 aaPredicted RBP11.4□□□□□ -0.58
SSMEM1-201ENST00000297819 PCDH10Q9P2E7 1040 aa11.39□□□□□ -0.59
SSMEM1-201ENST00000297819 TTLL13PA6NNM8 815 aa11.38□□□□□ -0.59
SSMEM1-201ENST00000297819 ZNF467Q7Z7K2 595 aaPredicted RBP11.37□□□□□ -0.59
SSMEM1-201ENST00000297819 TRIM41Q8WV44 630 aa11.36□□□□□ -0.59
SSMEM1-201ENST00000297819 METRNQ9UJH8 293 aa11.35□□□□□ -0.59
SSMEM1-201ENST00000297819 PCDHB8Q9UN66 801 aa11.34□□□□□ -0.59
SSMEM1-201ENST00000297819 TMEM106CQ9BVX2 250 aa11.33□□□□□ -0.6
SSMEM1-201ENST00000297819 POTEJP0CG39 1038 aa11.3□□□□□ -0.6
SSMEM1-201ENST00000297819 IER5LQ5T953 404 aa11.3□□□□□ -0.6
SSMEM1-201ENST00000297819 TRIM35Q9UPQ4 493 aa11.3□□□□□ -0.6
SSMEM1-201ENST00000297819 MAMSTRQ6ZN01 415 aa11.24□□□□□ -0.61
SSMEM1-201ENST00000297819 SEC24BO95487 1268 aa11.23□□□□□ -0.61
SSMEM1-201ENST00000297819 PDAP1Q13442 181 aaKnown RBP11.23□□□□□ -0.61
SSMEM1-201ENST00000297819 PSEN1P49768 467 aa11.22□□□□□ -0.61
SSMEM1-201ENST00000297819 LCE2DQ5TA82 110 aaPredicted RBP11.22□□□□□ -0.61
SSMEM1-201ENST00000297819 POTEFA5A3E0 1075 aa11.2□□□□□ -0.62
SSMEM1-201ENST00000297819 GOLGA2Q08379 1002 aa11.17□□□□□ -0.62
SSMEM1-201ENST00000297819 FAM163AQ96GL9 167 aaPredicted RBP11.17□□□□□ -0.62
SSMEM1-201ENST00000297819 COLQQ9Y215 455 aaPredicted RBP11.17□□□□□ -0.62
SSMEM1-201ENST00000297819 AMER1Q5JTC6 1135 aaPredicted RBP11.16□□□□□ -0.62
SSMEM1-201ENST00000297819 PLCG2P16885 1265 aa11.15□□□□□ -0.62
SSMEM1-201ENST00000297819 IRX5P78411 483 aaPredicted RBP11.15□□□□□ -0.62
SSMEM1-201ENST00000297819 MKRN3Q13064 507 aaKnown RBP11.14□□□□□ -0.63
SSMEM1-201ENST00000297819 RIOK3O14730 519 aaKnown RBP11.13□□□□□ -0.63
SSMEM1-201ENST00000297819 OCEL1Q9H607 264 aa11.13□□□□□ -0.63
SSMEM1-201ENST00000297819 SCUBE2Q9NQ36 999 aa11.13□□□□□ -0.63
SSMEM1-201ENST00000297819 RTN4Q9NQC3 1192 aaKnown RBP11.12□□□□□ -0.63
SSMEM1-201ENST00000297819 TAOK2Q9UL54 1235 aa11.1□□□□□ -0.63
SSMEM1-201ENST00000297819 VGFO15240 615 aaPredicted RBP11.09□□□□□ -0.63
SSMEM1-201ENST00000297819 RNF25Q96BH1 459 aaPredicted RBP11.09□□□□□ -0.63
SSMEM1-201ENST00000297819 ECM2O94769 699 aaPredicted RBP11.08□□□□□ -0.64
SSMEM1-201ENST00000297819 PKD2Q13563 968 aa11.07□□□□□ -0.64
SSMEM1-201ENST00000297819 CABP2Q9NPB3 220 aa11.07□□□□□ -0.64
SSMEM1-201ENST00000297819 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.04□□□□□ -0.64
SSMEM1-201ENST00000297819 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.02□□□□□ -0.65
SSMEM1-201ENST00000297819 ILDR1Q86SU0 546 aaPredicted RBP11.02□□□□□ -0.65
SSMEM1-201ENST00000297819 PDCD7Q8N8D1 485 aaKnown RBP11.02□□□□□ -0.65
SSMEM1-201ENST00000297819 ZFP91Q96JP5 570 aaPredicted RBP11.02□□□□□ -0.65
SSMEM1-201ENST00000297819 L3MBTL3Q96JM7 780 aaPredicted RBP11□□□□□ -0.65
SSMEM1-201ENST00000297819 EFCAB3Q8N7B9 438 aa10.97□□□□□ -0.65
SSMEM1-201ENST00000297819 CCDC180Q9P1Z9 1646 aa10.97□□□□□ -0.65
SSMEM1-201ENST00000297819 SOX12O15370 315 aa10.96□□□□□ -0.65
SSMEM1-201ENST00000297819 CDAN1Q8IWY9 1227 aa10.96□□□□□ -0.65
SSMEM1-201ENST00000297819 RGL2O15211 777 aa10.95□□□□□ -0.66
SSMEM1-201ENST00000297819 BCL11BQ9C0K0 894 aaPredicted RBP10.93□□□□□ -0.66
SSMEM1-201ENST00000297819 SLAIN1Q8ND83 568 aa10.92□□□□□ -0.66
SSMEM1-201ENST00000297819 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.92□□□□□ -0.66
SSMEM1-201ENST00000297819 STK25O00506 426 aa10.9□□□□□ -0.66
SSMEM1-201ENST00000297819 STK24Q9Y6E0 443 aa10.9□□□□□ -0.66
SSMEM1-201ENST00000297819 G3V3G9 751 aa10.89□□□□□ -0.67
SSMEM1-201ENST00000297819 C3orf67Q6ZVT6 689 aa10.89□□□□□ -0.67
SSMEM1-201ENST00000297819 DPY19L2Q6NUT2 758 aa10.88□□□□□ -0.67
SSMEM1-201ENST00000297819 BOLA1Q9Y3E2 137 aa10.87□□□□□ -0.67
SSMEM1-201ENST00000297819 NLRP6P59044 892 aa10.84□□□□□ -0.67
SSMEM1-201ENST00000297819 PHF8Q9UPP1 1060 aa10.84□□□□□ -0.67
SSMEM1-201ENST00000297819 TMEM121BQ9BXQ6 578 aaPredicted RBP10.83□□□□□ -0.68
SSMEM1-201ENST00000297819 ST18O60284 1047 aa10.82□□□□□ -0.68
SSMEM1-201ENST00000297819 SNPHO15079 494 aa10.8□□□□□ -0.68
SSMEM1-201ENST00000297819 MS4A4AQ96JQ5 239 aa10.8□□□□□ -0.68
SSMEM1-201ENST00000297819 FBXO22Q8NEZ5 403 aa10.79□□□□□ -0.68
SSMEM1-201ENST00000297819 HS6ST3Q8IZP7 471 aa10.78□□□□□ -0.68
SSMEM1-201ENST00000297819 MFRPQ9BY79 579 aa10.78□□□□□ -0.68
SSMEM1-201ENST00000297819 MICALL2Q8IY33 904 aa10.76□□□□□ -0.69
SSMEM1-201ENST00000297819 MMRN1Q13201 1228 aa10.74□□□□□ -0.69
SSMEM1-201ENST00000297819 CHGAP10645 457 aaKnown RBP10.72□□□□□ -0.69
SSMEM1-201ENST00000297819 SPNS2Q8IVW8 549 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms