RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 KCNH8Q96L42 1107 aa21.61■■□□□ 1.05
ARHGEF28-201ENST00000296794 NBR1Q14596 966 aa21.59■■□□□ 1.05
ARHGEF28-201ENST00000296794 WRNQ14191 1432 aaPredicted RBP eCLIP21.58■■□□□ 1.05
ARHGEF28-201ENST00000296794 EIF4G2P78344 907 aaKnown RBP eCLIP21.55■■□□□ 1.04
ARHGEF28-201ENST00000296794 ERCC6Q03468 1493 aa21.52■■□□□ 1.04
ARHGEF28-201ENST00000296794 CEP164Q9UPV0 1460 aa21.51■■□□□ 1.03
ARHGEF28-201ENST00000296794 RRP7BPQ9NSQ0 103 aa21.5■■□□□ 1.03
ARHGEF28-201ENST00000296794 KDM2AQ9Y2K7 1162 aa21.48■■□□□ 1.03
ARHGEF28-201ENST00000296794 UPF2Q9HAU5 1272 aaKnown RBP21.46■■□□□ 1.03
ARHGEF28-201ENST00000296794 EIF5BO60841 1220 aaKnown RBP21.46■■□□□ 1.03
ARHGEF28-201ENST00000296794 KIF27Q86VH2 1401 aa21.43■■□□□ 1.02
ARHGEF28-201ENST00000296794 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.42■■□□□ 1.02
ARHGEF28-201ENST00000296794 ANP32EQ9BTT0 268 aa21.41■■□□□ 1.02
ARHGEF28-201ENST00000296794 WDR43Q15061 677 aaKnown RBP eCLIP21.4■■□□□ 1.02
ARHGEF28-201ENST00000296794 PPP1R15AO75807 674 aaPredicted RBP21.4■■□□□ 1.02
ARHGEF28-201ENST00000296794 SUPT16HQ9Y5B9 1047 aaKnown RBP21.39■■□□□ 1.01
ARHGEF28-201ENST00000296794 HSP90AA1P07900 732 aaKnown RBP21.38■■□□□ 1.01
ARHGEF28-201ENST00000296794 ARID4BQ4LE39 1312 aaPredicted RBP21.38■■□□□ 1.01
ARHGEF28-201ENST00000296794 SIN3AQ96ST3 1273 aa21.37■■□□□ 1.01
ARHGEF28-201ENST00000296794 CFDP1Q9UEE9 299 aaPredicted RBP21.36■■□□□ 1.01
ARHGEF28-201ENST00000296794 CECR2Q9BXF3 1484 aa21.35■■□□□ 1.01
ARHGEF28-201ENST00000296794 SOGA1O94964 1423 aa21.33■■□□□ 1
ARHGEF28-201ENST00000296794 ANP32BQ92688 251 aaKnown RBP21.32■■□□□ 1
ARHGEF28-201ENST00000296794 BAZ1AQ9NRL2 1556 aaPredicted RBP21.31■■□□□ 1
ARHGEF28-201ENST00000296794 C14orf37Q86TY3 774 aa21.29■■□□□ 1
ARHGEF28-201ENST00000296794 SENP3-EIF4A1A0A087X0R7 540 aa21.27■■□□□ 1
ARHGEF28-201ENST00000296794 CCNB3Q8WWL7 1395 aa21.26■□□□□ 0.99
ARHGEF28-201ENST00000296794 SENP3Q9H4L4 574 aaPredicted RBP21.22■□□□□ 0.99
ARHGEF28-201ENST00000296794 ARXQ96QS3 562 aa21.22■□□□□ 0.99
ARHGEF28-201ENST00000296794 RGL3Q3MIN7 710 aa21.21■□□□□ 0.99
ARHGEF28-201ENST00000296794 PPP4R2Q9NY27 417 aa21.2■□□□□ 0.98
ARHGEF28-201ENST00000296794 DDRGK1Q96HY6 314 aa21.17■□□□□ 0.98
ARHGEF28-201ENST00000296794 TRHP20396 242 aaPredicted RBP21.16■□□□□ 0.98
ARHGEF28-201ENST00000296794 VPS8Q8N3P4 1428 aa21.16■□□□□ 0.98
ARHGEF28-201ENST00000296794 A0A0G2JS52 829 aa21.16■□□□□ 0.98
ARHGEF28-201ENST00000296794 PLEKHG5O94827 1062 aa21.12■□□□□ 0.97
ARHGEF28-201ENST00000296794 CARD11Q9BXL7 1154 aa21.12■□□□□ 0.97
ARHGEF28-201ENST00000296794 ZBTB7CA1YPR0 619 aa21.11■□□□□ 0.97
ARHGEF28-201ENST00000296794 TIMELESSQ9UNS1 1208 aa21.11■□□□□ 0.97
ARHGEF28-201ENST00000296794 MROH2BQ7Z745 1585 aa21.11■□□□□ 0.97
ARHGEF28-201ENST00000296794 ABCC8Q09428 1581 aa21.1■□□□□ 0.97
ARHGEF28-201ENST00000296794 CARMIL1Q5VZK9 1371 aa21.1■□□□□ 0.97
ARHGEF28-201ENST00000296794 CCDC88BA6NC98 1476 aa21.09■□□□□ 0.97
ARHGEF28-201ENST00000296794 HAP1P54257 671 aaPredicted RBP21.09■□□□□ 0.97
ARHGEF28-201ENST00000296794 CCER2I3L3R5 266 aa21.08■□□□□ 0.97
ARHGEF28-201ENST00000296794 PDS5BQ9NTI5 1447 aa21.08■□□□□ 0.96
ARHGEF28-201ENST00000296794 FHAD1B1AJZ9 1412 aa21.07■□□□□ 0.96
ARHGEF28-201ENST00000296794 B4GALNT3Q6L9W6 998 aa21.07■□□□□ 0.96
ARHGEF28-201ENST00000296794 CUX2O14529 1486 aa21.07■□□□□ 0.96
ARHGEF28-201ENST00000296794 KANK4Q5T7N3 995 aaPredicted RBP21.07■□□□□ 0.96
ARHGEF28-201ENST00000296794 CDCA8Q53HL2 280 aa21.06■□□□□ 0.96
ARHGEF28-201ENST00000296794 BECN1Q14457 450 aa21.06■□□□□ 0.96
ARHGEF28-201ENST00000296794 SETD5Q9C0A6 1442 aa21.05■□□□□ 0.96
ARHGEF28-201ENST00000296794 GLIPR1L2Q4G1C9 344 aa21.03■□□□□ 0.96
ARHGEF28-201ENST00000296794 NOP58Q9Y2X3 529 aaKnown RBP21.03■□□□□ 0.96
ARHGEF28-201ENST00000296794 KNSTRNQ9Y448 316 aa21.02■□□□□ 0.96
ARHGEF28-201ENST00000296794 RBM19Q9Y4C8 960 aaKnown RBP21■□□□□ 0.95
ARHGEF28-201ENST00000296794 PPM1GO15355 546 aaPredicted RBP21■□□□□ 0.95
ARHGEF28-201ENST00000296794 LAS1LQ9Y4W2 734 aaKnown RBP20.98■□□□□ 0.95
ARHGEF28-201ENST00000296794 MYH16Q9H6N6 1097 aa20.98■□□□□ 0.95
ARHGEF28-201ENST00000296794 POGKQ9P215 609 aa20.96■□□□□ 0.95
ARHGEF28-201ENST00000296794 EIF4G1Q04637 1599 aaKnown RBP20.96■□□□□ 0.95
ARHGEF28-201ENST00000296794 CFAP53Q96M91 514 aa20.96■□□□□ 0.95
ARHGEF28-201ENST00000296794 HSPA5P11021 654 aaKnown RBP20.94■□□□□ 0.94
ARHGEF28-201ENST00000296794 RAB3GAP2Q9H2M9 1393 aa20.94■□□□□ 0.94
ARHGEF28-201ENST00000296794 SMARCA2P51531 1590 aa20.93■□□□□ 0.94
ARHGEF28-201ENST00000296794 MLECQ14165 292 aa20.93■□□□□ 0.94
ARHGEF28-201ENST00000296794 CARMIL2Q6F5E8 1435 aa20.92■□□□□ 0.94
ARHGEF28-201ENST00000296794 HDGFP51858 240 aaKnown RBP20.91■□□□□ 0.94
ARHGEF28-201ENST00000296794 LMOD2Q6P5Q4 547 aa20.91■□□□□ 0.94
ARHGEF28-201ENST00000296794 RGS3P49796 1198 aa20.9■□□□□ 0.94
ARHGEF28-201ENST00000296794 ARHGAP35Q9NRY4 1499 aa20.9■□□□□ 0.94
ARHGEF28-201ENST00000296794 CC2D1BQ5T0F9 858 aaKnown RBP20.89■□□□□ 0.93
ARHGEF28-201ENST00000296794 KANK1Q14678 1352 aa20.89■□□□□ 0.93
ARHGEF28-201ENST00000296794 TDRD9Q8NDG6 1382 aaKnown RBP20.89■□□□□ 0.93
ARHGEF28-201ENST00000296794 TSHZ2Q9NRE2 1034 aa20.87■□□□□ 0.93
ARHGEF28-201ENST00000296794 NEUROD2Q15784 382 aa20.87■□□□□ 0.93
ARHGEF28-201ENST00000296794 TRIM44Q96DX7 344 aaPredicted RBP20.84■□□□□ 0.93
ARHGEF28-201ENST00000296794 DCAF11Q8TEB1 546 aa20.83■□□□□ 0.93
ARHGEF28-201ENST00000296794 FTSJ3Q8IY81 847 aaKnown RBP20.83■□□□□ 0.93
ARHGEF28-201ENST00000296794 GGT6Q6P531 493 aa20.82■□□□□ 0.92
ARHGEF28-201ENST00000296794 RTN4Q9NQC3 1192 aaKnown RBP20.81■□□□□ 0.92
ARHGEF28-201ENST00000296794 GOLGA6L22H0YM25 854 aa20.81■□□□□ 0.92
ARHGEF28-201ENST00000296794 WIZO95785 1651 aa20.81■□□□□ 0.92
ARHGEF28-201ENST00000296794 FRAT1Q92837 279 aaPredicted RBP20.8■□□□□ 0.92
ARHGEF28-201ENST00000296794 ERICH6BQ5W0A0 696 aa20.8■□□□□ 0.92
ARHGEF28-201ENST00000296794 FOXD1Q16676 465 aa20.79■□□□□ 0.92
ARHGEF28-201ENST00000296794 EFCAB2Q5VUJ9 269 aa20.79■□□□□ 0.92
ARHGEF28-201ENST00000296794 CADPSQ9ULU8 1353 aa20.79■□□□□ 0.92
ARHGEF28-201ENST00000296794 NUDCQ9Y266 331 aa20.78■□□□□ 0.92
ARHGEF28-201ENST00000296794 DEKP35659 375 aaKnown RBP20.78■□□□□ 0.92
ARHGEF28-201ENST00000296794 TOP2AP11388 1531 aaKnown RBP20.76■□□□□ 0.91
ARHGEF28-201ENST00000296794 TMF1P82094 1093 aa20.76■□□□□ 0.91
ARHGEF28-201ENST00000296794 TNNT2P45379 298 aaPredicted RBP20.73■□□□□ 0.91
ARHGEF28-201ENST00000296794 NCLP19338 710 aaKnown RBP20.73■□□□□ 0.91
ARHGEF28-201ENST00000296794 MAPK8IP3Q9UPT6 1336 aa20.73■□□□□ 0.91
ARHGEF28-201ENST00000296794 DHX57Q6P158 1386 aaKnown RBP20.72■□□□□ 0.91
ARHGEF28-201ENST00000296794 MPHOSPH9Q99550 1183 aa20.71■□□□□ 0.91
ARHGEF28-201ENST00000296794 PKD2Q13563 968 aa20.71■□□□□ 0.91
ARHGEF28-201ENST00000296794 RAPGEF2Q9Y4G8 1499 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms