RNA–Protein interactions for RNA: ENST00000288828.8

WIPI2-201, Transcript of WD repeat domain, phosphoinositide interacting 2, humanhuman

TSL 1 (best) BASIC

Gene WIPI2, Length 4,476 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WIPI2-201ENST00000288828 KDM2AQ9Y2K7 1162 aa23.79■■□□□ 1.4
WIPI2-201ENST00000288828 VPS8Q8N3P4 1428 aa23.79■■□□□ 1.4
WIPI2-201ENST00000288828 CCDC136Q96JN2 1154 aa23.76■■□□□ 1.39
WIPI2-201ENST00000288828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.76■■□□□ 1.39
WIPI2-201ENST00000288828 CHMP7Q8WUX9 453 aaPredicted RBP23.72■■□□□ 1.39
WIPI2-201ENST00000288828 WIZO95785 1651 aa23.7■■□□□ 1.38
WIPI2-201ENST00000288828 KANK4Q5T7N3 995 aaPredicted RBP23.69■■□□□ 1.38
WIPI2-201ENST00000288828 CHGAP10645 457 aaKnown RBP23.65■■□□□ 1.38
WIPI2-201ENST00000288828 CARMIL1Q5VZK9 1371 aa23.65■■□□□ 1.38
WIPI2-201ENST00000288828 ZBTB47Q9UFB7 747 aaPredicted RBP23.64■■□□□ 1.37
WIPI2-201ENST00000288828 CUX2O14529 1486 aa23.63■■□□□ 1.37
WIPI2-201ENST00000288828 NEFMP07197 916 aa23.63■■□□□ 1.37
WIPI2-201ENST00000288828 BCL11AQ9H165 835 aa23.63■■□□□ 1.37
WIPI2-201ENST00000288828 FHAD1B1AJZ9 1412 aa23.61■■□□□ 1.37
WIPI2-201ENST00000288828 SUPT16HQ9Y5B9 1047 aaKnown RBP23.58■■□□□ 1.37
WIPI2-201ENST00000288828 TOP2AP11388 1531 aaKnown RBP23.57■■□□□ 1.36
WIPI2-201ENST00000288828 CFDP1Q9UEE9 299 aaPredicted RBP23.55■■□□□ 1.36
WIPI2-201ENST00000288828 PLEKHD1A6NEE1 506 aa23.55■■□□□ 1.36
WIPI2-201ENST00000288828 SENP3-EIF4A1A0A087X0R7 540 aa23.52■■□□□ 1.36
WIPI2-201ENST00000288828 TIMELESSQ9UNS1 1208 aa23.52■■□□□ 1.36
WIPI2-201ENST00000288828 WDR43Q15061 677 aaKnown RBP eCLIP23.51■■□□□ 1.35
WIPI2-201ENST00000288828 RGL3Q3MIN7 710 aa23.49■■□□□ 1.35
WIPI2-201ENST00000288828 SETD5Q9C0A6 1442 aa23.48■■□□□ 1.35
WIPI2-201ENST00000288828 NBR1Q14596 966 aa23.48■■□□□ 1.35
WIPI2-201ENST00000288828 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.44■■□□□ 1.34
WIPI2-201ENST00000288828 RUSC2Q8N2Y8 1516 aa23.44■■□□□ 1.34
WIPI2-201ENST00000288828 SMARCA2P51531 1590 aa23.43■■□□□ 1.34
WIPI2-201ENST00000288828 RAB3GAP2Q9H2M9 1393 aa23.43■■□□□ 1.34
WIPI2-201ENST00000288828 SLC24A1O60721 1099 aa23.41■■□□□ 1.34
WIPI2-201ENST00000288828 CARD11Q9BXL7 1154 aa23.41■■□□□ 1.34
WIPI2-201ENST00000288828 NPM1P06748 294 aaKnown RBP eCLIP23.41■■□□□ 1.34
WIPI2-201ENST00000288828 KCNH8Q96L42 1107 aa23.4■■□□□ 1.34
WIPI2-201ENST00000288828 RAPGEF2Q9Y4G8 1499 aa23.4■■□□□ 1.34
WIPI2-201ENST00000288828 STAG3Q9UJ98 1225 aa23.36■■□□□ 1.33
WIPI2-201ENST00000288828 UPF2Q9HAU5 1272 aaKnown RBP23.36■■□□□ 1.33
WIPI2-201ENST00000288828 CCER2I3L3R5 266 aa23.34■■□□□ 1.33
WIPI2-201ENST00000288828 ARHGAP35Q9NRY4 1499 aa23.34■■□□□ 1.33
WIPI2-201ENST00000288828 ANP32EQ9BTT0 268 aa23.33■■□□□ 1.33
WIPI2-201ENST00000288828 PPP4R2Q9NY27 417 aa23.3■■□□□ 1.32
WIPI2-201ENST00000288828 SMARCA4P51532 1647 aa23.28■■□□□ 1.32
WIPI2-201ENST00000288828 HSPA5P11021 654 aaKnown RBP23.26■■□□□ 1.31
WIPI2-201ENST00000288828 ESF1Q9H501 851 aaKnown RBP23.26■■□□□ 1.31
WIPI2-201ENST00000288828 ATAD2BQ9ULI0 1458 aa23.26■■□□□ 1.31
WIPI2-201ENST00000288828 PPP1R15AO75807 674 aaPredicted RBP23.25■■□□□ 1.31
WIPI2-201ENST00000288828 EIF4G1Q04637 1599 aaKnown RBP23.25■■□□□ 1.31
WIPI2-201ENST00000288828 HSP90AA1P07900 732 aaKnown RBP23.23■■□□□ 1.31
WIPI2-201ENST00000288828 DHX57Q6P158 1386 aaKnown RBP23.23■■□□□ 1.31
WIPI2-201ENST00000288828 FOXD1Q16676 465 aa23.22■■□□□ 1.31
WIPI2-201ENST00000288828 B4GALNT3Q6L9W6 998 aa23.22■■□□□ 1.31
WIPI2-201ENST00000288828 TDRD9Q8NDG6 1382 aaKnown RBP23.22■■□□□ 1.31
WIPI2-201ENST00000288828 KNSTRNQ9Y448 316 aa23.21■■□□□ 1.31
WIPI2-201ENST00000288828 FMN1Q68DA7 1419 aa23.19■■□□□ 1.3
WIPI2-201ENST00000288828 DCAF11Q8TEB1 546 aa23.17■■□□□ 1.3
WIPI2-201ENST00000288828 CDCA8Q53HL2 280 aa23.16■■□□□ 1.3
WIPI2-201ENST00000288828 FHOD3Q2V2M9 1422 aa23.14■■□□□ 1.3
WIPI2-201ENST00000288828 SENP3Q9H4L4 574 aaPredicted RBP23.13■■□□□ 1.29
WIPI2-201ENST00000288828 CADPSQ9ULU8 1353 aa23.13■■□□□ 1.29
WIPI2-201ENST00000288828 MPHOSPH9Q99550 1183 aa23.13■■□□□ 1.29
WIPI2-201ENST00000288828 PKD2Q13563 968 aa23.1■■□□□ 1.29
WIPI2-201ENST00000288828 CC2D1BQ5T0F9 858 aaKnown RBP23.09■■□□□ 1.29
WIPI2-201ENST00000288828 RBM19Q9Y4C8 960 aaKnown RBP23.09■■□□□ 1.29
WIPI2-201ENST00000288828 EIF5BO60841 1220 aaKnown RBP23.09■■□□□ 1.29
WIPI2-201ENST00000288828 DDRGK1Q96HY6 314 aa23.04■■□□□ 1.28
WIPI2-201ENST00000288828 L3MBTL2Q969R5 705 aa23.04■■□□□ 1.28
WIPI2-201ENST00000288828 ARXQ96QS3 562 aa23.03■■□□□ 1.28
WIPI2-201ENST00000288828 ERCC6Q03468 1493 aa23.02■■□□□ 1.28
WIPI2-201ENST00000288828 NEUROD2Q15784 382 aa23.02■■□□□ 1.27
WIPI2-201ENST00000288828 PLPPR3Q6T4P5 718 aa23.02■■□□□ 1.27
WIPI2-201ENST00000288828 ANP32BQ92688 251 aaKnown RBP23.01■■□□□ 1.27
WIPI2-201ENST00000288828 TSHZ2Q9NRE2 1034 aa23■■□□□ 1.27
WIPI2-201ENST00000288828 PDS5BQ9NTI5 1447 aa23■■□□□ 1.27
WIPI2-201ENST00000288828 CFAP53Q96M91 514 aa22.99■■□□□ 1.27
WIPI2-201ENST00000288828 TMF1P82094 1093 aa22.99■■□□□ 1.27
WIPI2-201ENST00000288828 NOP58Q9Y2X3 529 aaKnown RBP22.97■■□□□ 1.27
WIPI2-201ENST00000288828 RGS3P49796 1198 aa22.94■■□□□ 1.26
WIPI2-201ENST00000288828 BECN1Q14457 450 aa22.93■■□□□ 1.26
WIPI2-201ENST00000288828 NUP155O75694 1391 aa22.92■■□□□ 1.26
WIPI2-201ENST00000288828 ERICH6BQ5W0A0 696 aa22.92■■□□□ 1.26
WIPI2-201ENST00000288828 TNNT2P45379 298 aaPredicted RBP22.91■■□□□ 1.26
WIPI2-201ENST00000288828 LAS1LQ9Y4W2 734 aaKnown RBP22.9■■□□□ 1.26
WIPI2-201ENST00000288828 MYH16Q9H6N6 1097 aa22.89■■□□□ 1.26
WIPI2-201ENST00000288828 IGF1RP08069 1367 aa22.89■■□□□ 1.25
WIPI2-201ENST00000288828 PPM1GO15355 546 aaPredicted RBP22.88■■□□□ 1.25
WIPI2-201ENST00000288828 FRAT1Q92837 279 aaPredicted RBP22.88■■□□□ 1.25
WIPI2-201ENST00000288828 ANKRD30AQ9BXX3 1397 aa22.86■■□□□ 1.25
WIPI2-201ENST00000288828 CARMIL2Q6F5E8 1435 aa22.86■■□□□ 1.25
WIPI2-201ENST00000288828 KIF21BO75037 1637 aa22.85■■□□□ 1.25
WIPI2-201ENST00000288828 FTSJ3Q8IY81 847 aaKnown RBP22.85■■□□□ 1.25
WIPI2-201ENST00000288828 KTN1Q86UP2 1357 aaKnown RBP22.83■■□□□ 1.25
WIPI2-201ENST00000288828 ROCK2O75116 1388 aaKnown RBP22.81■■□□□ 1.24
WIPI2-201ENST00000288828 RALBP1Q15311 655 aa22.8■■□□□ 1.24
WIPI2-201ENST00000288828 FANCD2Q9BXW9 1451 aa22.79■■□□□ 1.24
WIPI2-201ENST00000288828 NUDCQ9Y266 331 aa22.79■■□□□ 1.24
WIPI2-201ENST00000288828 MAPK8IP3Q9UPT6 1336 aa22.79■■□□□ 1.24
WIPI2-201ENST00000288828 RCAN3Q9UKA8 241 aa22.79■■□□□ 1.24
WIPI2-201ENST00000288828 CCDC18Q5T9S5 1454 aa22.78■■□□□ 1.24
WIPI2-201ENST00000288828 POGKQ9P215 609 aa22.74■■□□□ 1.23
WIPI2-201ENST00000288828 PHLDB1Q86UU1 1377 aa22.74■■□□□ 1.23
WIPI2-201ENST00000288828 PRKRIP1Q9H875 184 aaPredicted RBP22.74■■□□□ 1.23
WIPI2-201ENST00000288828 HNRNPMP52272 730 aaKnown RBP eCLIP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms