RNA–Protein interactions for RNA: ENST00000269033.7

SSH2-201, Transcript of slingshot protein phosphatase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH2, Length 9,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-201ENST00000269033 CFAP44Q96MT7 982 aa7.85□□□□□ -1.15
SSH2-201ENST00000269033 RSF1Q96T23 1441 aaPredicted RBP7.84□□□□□ -1.15
SSH2-201ENST00000269033 MS4A1P11836 297 aa7.84□□□□□ -1.16
SSH2-201ENST00000269033 DDRGK1Q96HY6 314 aa7.83□□□□□ -1.16
SSH2-201ENST00000269033 TMX4Q9H1E5 349 aaPredicted RBP7.83□□□□□ -1.16
SSH2-201ENST00000269033 ARID4BQ4LE39 1312 aaPredicted RBP7.83□□□□□ -1.16
SSH2-201ENST00000269033 CSRNP3Q8WYN3 585 aa7.83□□□□□ -1.16
SSH2-201ENST00000269033 MTUS2Q5JR59 1369 aa7.81□□□□□ -1.16
SSH2-201ENST00000269033 LOC105371045A0A1W2PR82 267 aa7.81□□□□□ -1.16
SSH2-201ENST00000269033 CCDC136Q96JN2 1154 aa7.8□□□□□ -1.16
SSH2-201ENST00000269033 ANO8Q9HCE9 1232 aaPredicted RBP7.8□□□□□ -1.16
SSH2-201ENST00000269033 CHAF1AQ13111 956 aaPredicted RBP7.8□□□□□ -1.16
SSH2-201ENST00000269033 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.8□□□□□ -1.16
SSH2-201ENST00000269033 NUDCQ9Y266 331 aa7.8□□□□□ -1.16
SSH2-201ENST00000269033 P3H3Q8IVL6 736 aa7.78□□□□□ -1.16
SSH2-201ENST00000269033 ARID3CA6NKF2 412 aa7.78□□□□□ -1.16
SSH2-201ENST00000269033 PLEKHD1A6NEE1 506 aa7.78□□□□□ -1.16
SSH2-201ENST00000269033 KIAA2012Q0VF49 1180 aa7.77□□□□□ -1.17
SSH2-201ENST00000269033 ARXQ96QS3 562 aa7.77□□□□□ -1.17
SSH2-201ENST00000269033 CCDC180Q9P1Z9 1646 aa7.76□□□□□ -1.17
SSH2-201ENST00000269033 ZBTB7CA1YPR0 619 aa7.76□□□□□ -1.17
SSH2-201ENST00000269033 CCDC34Q96HJ3 373 aa7.76□□□□□ -1.17
SSH2-201ENST00000269033 FGD1P98174 961 aa7.76□□□□□ -1.17
SSH2-201ENST00000269033 USP35Q9P2H5 1018 aa7.76□□□□□ -1.17
SSH2-201ENST00000269033 KANK1Q14678 1352 aa7.76□□□□□ -1.17
SSH2-201ENST00000269033 MAPK8IP3Q9UPT6 1336 aa7.76□□□□□ -1.17
SSH2-201ENST00000269033 HNRNPUQ00839 825 aaKnown RBP eCLIP7.76□□□□□ -1.17
SSH2-201ENST00000269033 FTSJ3Q8IY81 847 aaKnown RBP7.75□□□□□ -1.17
SSH2-201ENST00000269033 PTMAP06454 111 aaKnown RBP7.75□□□□□ -1.17
SSH2-201ENST00000269033 HDAC5Q9UQL6 1122 aa7.75□□□□□ -1.17
SSH2-201ENST00000269033 KNSTRNQ9Y448 316 aa7.75□□□□□ -1.17
SSH2-201ENST00000269033 RB1CC1Q8TDY2 1594 aa7.73□□□□□ -1.17
SSH2-201ENST00000269033 SCRIBQ14160 1630 aa7.73□□□□□ -1.17
SSH2-201ENST00000269033 MCCP23508 829 aa7.72□□□□□ -1.17
SSH2-201ENST00000269033 OS9Q13438 667 aaPredicted RBP7.72□□□□□ -1.17
SSH2-201ENST00000269033 CLSTN1O94985 981 aa7.71□□□□□ -1.17
SSH2-201ENST00000269033 POGKQ9P215 609 aa7.71□□□□□ -1.17
SSH2-201ENST00000269033 KCNJ4P48050 445 aa7.71□□□□□ -1.18
SSH2-201ENST00000269033 FAM9BQ8IZU0 186 aa7.71□□□□□ -1.18
SSH2-201ENST00000269033 MRS2Q9HD23 443 aa7.71□□□□□ -1.18
SSH2-201ENST00000269033 ERCC6Q03468 1493 aa7.71□□□□□ -1.18
SSH2-201ENST00000269033 EEA1Q15075 1411 aa7.7□□□□□ -1.18
SSH2-201ENST00000269033 GTF3C3Q9Y5Q9 886 aa7.7□□□□□ -1.18
SSH2-201ENST00000269033 GOLGA6L4A6NEF3 574 aa7.7□□□□□ -1.18
SSH2-201ENST00000269033 HTATSF1O43719 755 aaKnown RBP7.7□□□□□ -1.18
SSH2-201ENST00000269033 CALD1Q05682 793 aaKnown RBP7.69□□□□□ -1.18
SSH2-201ENST00000269033 DNTTIP2Q5QJE6 756 aaKnown RBP7.69□□□□□ -1.18
SSH2-201ENST00000269033 KRI1Q8N9T8 703 aaKnown RBP7.69□□□□□ -1.18
SSH2-201ENST00000269033 TULP1O00294 542 aaPredicted RBP7.69□□□□□ -1.18
SSH2-201ENST00000269033 PTMSP20962 102 aa7.68□□□□□ -1.18
SSH2-201ENST00000269033 LMOD2Q6P5Q4 547 aa7.68□□□□□ -1.18
SSH2-201ENST00000269033 CLIP1P30622 1438 aa7.68□□□□□ -1.18
SSH2-201ENST00000269033 KDM2AQ9Y2K7 1162 aa7.67□□□□□ -1.18
SSH2-201ENST00000269033 GNL2Q13823 731 aaKnown RBP7.67□□□□□ -1.18
SSH2-201ENST00000269033 ERICH6BQ5W0A0 696 aa7.67□□□□□ -1.18
SSH2-201ENST00000269033 CHMP4CQ96CF2 233 aa7.66□□□□□ -1.18
SSH2-201ENST00000269033 DCAF8L1A6NGE4 600 aa7.66□□□□□ -1.18
SSH2-201ENST00000269033 FKBP8Q14318 412 aa7.65□□□□□ -1.19
SSH2-201ENST00000269033 AEBP2Q6ZN18 517 aaPredicted RBP7.64□□□□□ -1.19
SSH2-201ENST00000269033 NOC3LQ8WTT2 800 aaKnown RBP7.64□□□□□ -1.19
SSH2-201ENST00000269033 CFDP1Q9UEE9 299 aaPredicted RBP7.64□□□□□ -1.19
SSH2-201ENST00000269033 ISY1Q9ULR0 285 aaKnown RBP7.64□□□□□ -1.19
SSH2-201ENST00000269033 PPM1GO15355 546 aaPredicted RBP7.63□□□□□ -1.19
SSH2-201ENST00000269033 FOXD1Q16676 465 aa7.63□□□□□ -1.19
SSH2-201ENST00000269033 RTF1Q92541 710 aaKnown RBP7.63□□□□□ -1.19
SSH2-201ENST00000269033 KCNH8Q96L42 1107 aa7.63□□□□□ -1.19
SSH2-201ENST00000269033 PRM3Q9NNZ6 103 aa7.63□□□□□ -1.19
SSH2-201ENST00000269033 GPATCH3Q96I76 525 aa7.63□□□□□ -1.19
SSH2-201ENST00000269033 KIAA1211Q6ZU35 1233 aa7.63□□□□□ -1.19
SSH2-201ENST00000269033 CHIC2Q9UKJ5 165 aa7.62□□□□□ -1.19
SSH2-201ENST00000269033 TPM4P67936 248 aa7.62□□□□□ -1.19
SSH2-201ENST00000269033 CEP89Q96ST8 783 aa7.62□□□□□ -1.19
SSH2-201ENST00000269033 G3V3G9 751 aa7.62□□□□□ -1.19
SSH2-201ENST00000269033 TRHP20396 242 aaPredicted RBP7.62□□□□□ -1.19
SSH2-201ENST00000269033 DCAF8Q5TAQ9 597 aa7.62□□□□□ -1.19
SSH2-201ENST00000269033 SALL2Q9Y467 1007 aaPredicted RBP7.61□□□□□ -1.19
SSH2-201ENST00000269033 IPO8O15397 1037 aaKnown RBP7.61□□□□□ -1.19
SSH2-201ENST00000269033 NAP1L2Q9ULW6 460 aaPredicted RBP7.61□□□□□ -1.19
SSH2-201ENST00000269033 KIF3AQ9Y496 699 aa7.6□□□□□ -1.19
SSH2-201ENST00000269033 WASHC2AQ641Q2 1341 aa7.6□□□□□ -1.19
SSH2-201ENST00000269033 FHAD1B1AJZ9 1412 aa7.6□□□□□ -1.19
SSH2-201ENST00000269033 DDX10Q13206 875 aaKnown RBP7.6□□□□□ -1.19
SSH2-201ENST00000269033 CEP162Q5TB80 1403 aa7.6□□□□□ -1.19
SSH2-201ENST00000269033 KIF27Q86VH2 1401 aa7.6□□□□□ -1.19
SSH2-201ENST00000269033 HSP90AB1P08238 724 aaKnown RBP7.6□□□□□ -1.19
SSH2-201ENST00000269033 PLEKHG5O94827 1062 aa7.59□□□□□ -1.19
SSH2-201ENST00000269033 EIF3AQ14152 1382 aaKnown RBP7.59□□□□□ -1.19
SSH2-201ENST00000269033 SYAP1Q96A49 352 aaPredicted RBP7.59□□□□□ -1.19
SSH2-201ENST00000269033 CSPP1Q1MSJ5 1256 aa7.59□□□□□ -1.19
SSH2-201ENST00000269033 NCBP3Q53F19 620 aaKnown RBP7.59□□□□□ -1.19
SSH2-201ENST00000269033 SPAG9O60271 1321 aaKnown RBP7.58□□□□□ -1.2
SSH2-201ENST00000269033 HDGFL2Q7Z4V5 671 aaPredicted RBP7.58□□□□□ -1.2
SSH2-201ENST00000269033 NACADO15069 1562 aa7.58□□□□□ -1.2
SSH2-201ENST00000269033 HSCBQ8IWL3 235 aa7.58□□□□□ -1.2
SSH2-201ENST00000269033 LRRFIP1Q32MZ4 808 aaKnown RBP7.57□□□□□ -1.2
SSH2-201ENST00000269033 HMGB2P26583 209 aaKnown RBP7.57□□□□□ -1.2
SSH2-201ENST00000269033 WWC1Q8IX03 1113 aa7.57□□□□□ -1.2
SSH2-201ENST00000269033 TMF1P82094 1093 aa7.57□□□□□ -1.2
SSH2-201ENST00000269033 CARD11Q9BXL7 1154 aa7.57□□□□□ -1.2
SSH2-201ENST00000269033 GOLGA3Q08378 1498 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms