RNA–Protein interactions for RNA: ENST00000265085.9

CPEB4-201, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPEB4, Length 9,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-201ENST00000265085 TNNT3P45378 269 aaPredicted RBP10.96□□□□□ -0.66
CPEB4-201ENST00000265085 MIER1Q8N108 512 aa10.95□□□□□ -0.66
CPEB4-201ENST00000265085 TULP1O00294 542 aaPredicted RBP10.93□□□□□ -0.66
CPEB4-201ENST00000265085 FANCIQ9NVI1 1328 aa10.93□□□□□ -0.66
CPEB4-201ENST00000265085 NISCHQ9Y2I1 1504 aa10.92□□□□□ -0.66
CPEB4-201ENST00000265085 RRP9O43818 475 aaKnown RBP10.92□□□□□ -0.66
CPEB4-201ENST00000265085 ZMYND15Q9H091 742 aa10.92□□□□□ -0.66
CPEB4-201ENST00000265085 HMGB1P09429 215 aaKnown RBP10.91□□□□□ -0.66
CPEB4-201ENST00000265085 LOC105371045A0A1W2PR82 267 aa10.91□□□□□ -0.66
CPEB4-201ENST00000265085 LAS1LQ9Y4W2 734 aaKnown RBP10.9□□□□□ -0.66
CPEB4-201ENST00000265085 ARID4BQ4LE39 1312 aaPredicted RBP10.88□□□□□ -0.67
CPEB4-201ENST00000265085 CALRP27797 417 aaKnown RBP10.86□□□□□ -0.67
CPEB4-201ENST00000265085 UPF2Q9HAU5 1272 aaKnown RBP10.86□□□□□ -0.67
CPEB4-201ENST00000265085 BRD2P25440 801 aaKnown RBP10.86□□□□□ -0.67
CPEB4-201ENST00000265085 MSNP26038 577 aaKnown RBP10.83□□□□□ -0.68
CPEB4-201ENST00000265085 BECN1Q14457 450 aa10.83□□□□□ -0.68
CPEB4-201ENST00000265085 MAP7D2Q96T17 732 aa10.81□□□□□ -0.68
CPEB4-201ENST00000265085 PTMAP06454 111 aaKnown RBP10.8□□□□□ -0.68
CPEB4-201ENST00000265085 MTERF4Q7Z6M4 381 aaKnown RBP10.8□□□□□ -0.68
CPEB4-201ENST00000265085 GSE1Q14687 1217 aa10.79□□□□□ -0.68
CPEB4-201ENST00000265085 TAF3Q5VWG9 929 aa10.79□□□□□ -0.68
CPEB4-201ENST00000265085 RBM10P98175 930 aaKnown RBP10.79□□□□□ -0.68
CPEB4-201ENST00000265085 PATL2C9JE40 543 aaKnown RBP10.78□□□□□ -0.68
CPEB4-201ENST00000265085 HSP90B1P14625 803 aaKnown RBP10.78□□□□□ -0.68
CPEB4-201ENST00000265085 IPO9Q96P70 1041 aaKnown RBP10.78□□□□□ -0.68
CPEB4-201ENST00000265085 PAXIP1Q6ZW49 1069 aaPredicted RBP10.77□□□□□ -0.68
CPEB4-201ENST00000265085 CHAF1AQ13111 956 aaPredicted RBP10.77□□□□□ -0.69
CPEB4-201ENST00000265085 IL27Q8NEV9 243 aa10.77□□□□□ -0.69
CPEB4-201ENST00000265085 FAM43AQ8N2R8 423 aa10.77□□□□□ -0.69
CPEB4-201ENST00000265085 BBXQ8WY36 941 aaPredicted RBP10.77□□□□□ -0.69
CPEB4-201ENST00000265085 PPP4R2Q9NY27 417 aa10.76□□□□□ -0.69
CPEB4-201ENST00000265085 HNRNPUL2Q1KMD3 747 aaKnown RBP10.76□□□□□ -0.69
CPEB4-201ENST00000265085 FGD1P98174 961 aa10.75□□□□□ -0.69
CPEB4-201ENST00000265085 HNRNPUQ00839 825 aaKnown RBP eCLIP10.75□□□□□ -0.69
CPEB4-201ENST00000265085 BCL11BQ9C0K0 894 aaPredicted RBP10.74□□□□□ -0.69
CPEB4-201ENST00000265085 KLHL34Q8N239 644 aa10.74□□□□□ -0.69
CPEB4-201ENST00000265085 TRIM52Q96A61 297 aa10.73□□□□□ -0.69
CPEB4-201ENST00000265085 GOLGA6L3A6NEY3 463 aa10.72□□□□□ -0.69
CPEB4-201ENST00000265085 GOLGA6L22H0YM25 854 aa10.72□□□□□ -0.69
CPEB4-201ENST00000265085 ARID3AQ99856 593 aa10.71□□□□□ -0.69
CPEB4-201ENST00000265085 TPM2P07951 284 aa10.7□□□□□ -0.7
CPEB4-201ENST00000265085 CCDC9Q9Y3X0 531 aaKnown RBP10.69□□□□□ -0.7
CPEB4-201ENST00000265085 NAP1L2Q9ULW6 460 aaPredicted RBP10.69□□□□□ -0.7
CPEB4-201ENST00000265085 UBTFP17480 764 aaKnown RBP10.66□□□□□ -0.7
CPEB4-201ENST00000265085 IRX6P78412 446 aaPredicted RBP10.66□□□□□ -0.7
CPEB4-201ENST00000265085 GOLGA6L6A8MZA4 724 aa10.65□□□□□ -0.7
CPEB4-201ENST00000265085 ZNF771Q7L3S4 317 aaPredicted RBP10.65□□□□□ -0.7
CPEB4-201ENST00000265085 CCDC66A2RUB6 948 aa10.65□□□□□ -0.71
CPEB4-201ENST00000265085 IRX3P78415 501 aaPredicted RBP10.65□□□□□ -0.71
CPEB4-201ENST00000265085 GOLGA6L1Q8N7Z2 621 aa10.64□□□□□ -0.71
CPEB4-201ENST00000265085 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.62□□□□□ -0.71
CPEB4-201ENST00000265085 CC2D1BQ5T0F9 858 aaKnown RBP10.62□□□□□ -0.71
CPEB4-201ENST00000265085 FAM13BQ9NYF5 915 aa10.61□□□□□ -0.71
CPEB4-201ENST00000265085 BRPF3Q9ULD4 1205 aa10.6□□□□□ -0.71
CPEB4-201ENST00000265085 AXDND1Q5T1B0 1012 aaPredicted RBP10.59□□□□□ -0.71
CPEB4-201ENST00000265085 TSPYL1Q9H0U9 437 aa10.59□□□□□ -0.71
CPEB4-201ENST00000265085 BCCIPQ9P287 314 aaKnown RBP eCLIP10.59□□□□□ -0.71
CPEB4-201ENST00000265085 SETQ01105 290 aaPredicted RBP10.58□□□□□ -0.72
CPEB4-201ENST00000265085 PDCL3Q9H2J4 239 aa10.58□□□□□ -0.72
CPEB4-201ENST00000265085 WWC1Q8IX03 1113 aa10.56□□□□□ -0.72
CPEB4-201ENST00000265085 MYH16Q9H6N6 1097 aa10.56□□□□□ -0.72
CPEB4-201ENST00000265085 CLGNO14967 610 aa10.55□□□□□ -0.72
CPEB4-201ENST00000265085 NOM1Q5C9Z4 860 aaKnown RBP10.55□□□□□ -0.72
CPEB4-201ENST00000265085 AAMPQ13685 434 aa10.54□□□□□ -0.72
CPEB4-201ENST00000265085 ZNF526Q8TF50 670 aaPredicted RBP10.54□□□□□ -0.72
CPEB4-201ENST00000265085 KIAA2012Q0VF49 1180 aa10.54□□□□□ -0.72
CPEB4-201ENST00000265085 CHMP4BQ9H444 224 aaKnown RBP10.54□□□□□ -0.72
CPEB4-201ENST00000265085 TCERG1O14776 1098 aaKnown RBP10.53□□□□□ -0.72
CPEB4-201ENST00000265085 PLPPR3Q6T4P5 718 aa10.52□□□□□ -0.72
CPEB4-201ENST00000265085 CALD1Q05682 793 aaKnown RBP10.52□□□□□ -0.72
CPEB4-201ENST00000265085 CSPP1Q1MSJ5 1256 aa10.52□□□□□ -0.73
CPEB4-201ENST00000265085 FBXO3Q9UK99 471 aa10.52□□□□□ -0.73
CPEB4-201ENST00000265085 TPRNQ4KMQ1 711 aa10.52□□□□□ -0.73
CPEB4-201ENST00000265085 DHX37Q8IY37 1157 aaKnown RBP10.51□□□□□ -0.73
CPEB4-201ENST00000265085 IPO4Q8TEX9 1081 aaKnown RBP10.51□□□□□ -0.73
CPEB4-201ENST00000265085 FTSJ3Q8IY81 847 aaKnown RBP10.51□□□□□ -0.73
CPEB4-201ENST00000265085 CHMP4AQ9BY43 222 aa10.51□□□□□ -0.73
CPEB4-201ENST00000265085 AEBP1Q8IUX7 1158 aa10.5□□□□□ -0.73
CPEB4-201ENST00000265085 B4GALNT3Q6L9W6 998 aa10.49□□□□□ -0.73
CPEB4-201ENST00000265085 DDX10Q13206 875 aaKnown RBP10.48□□□□□ -0.73
CPEB4-201ENST00000265085 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.48□□□□□ -0.73
CPEB4-201ENST00000265085 PSMD1Q99460 953 aa10.48□□□□□ -0.73
CPEB4-201ENST00000265085 MYO15BQ96JP2 1530 aa10.48□□□□□ -0.73
CPEB4-201ENST00000265085 CLSTN1O94985 981 aa10.47□□□□□ -0.73
CPEB4-201ENST00000265085 PLCD4Q9BRC7 762 aa10.47□□□□□ -0.73
CPEB4-201ENST00000265085 DNAJC2Q99543 621 aaKnown RBP10.47□□□□□ -0.73
CPEB4-201ENST00000265085 SSR1P43307 286 aaKnown RBP10.47□□□□□ -0.73
CPEB4-201ENST00000265085 MAPK8IP2Q13387 824 aaPredicted RBP10.45□□□□□ -0.74
CPEB4-201ENST00000265085 CWC15Q9P013 229 aaKnown RBP10.44□□□□□ -0.74
CPEB4-201ENST00000265085 OS9Q13438 667 aaPredicted RBP10.44□□□□□ -0.74
CPEB4-201ENST00000265085 FAM193AP78312 1265 aa10.44□□□□□ -0.74
CPEB4-201ENST00000265085 EEA1Q15075 1411 aa10.44□□□□□ -0.74
CPEB4-201ENST00000265085 FRAT1Q92837 279 aaPredicted RBP10.43□□□□□ -0.74
CPEB4-201ENST00000265085 FAM9BQ8IZU0 186 aa10.43□□□□□ -0.74
CPEB4-201ENST00000265085 ZHX1Q9UKY1 873 aaPredicted RBP10.43□□□□□ -0.74
CPEB4-201ENST00000265085 RGS3P49796 1198 aa10.43□□□□□ -0.74
CPEB4-201ENST00000265085 TEX35Q5T0J7 233 aa10.42□□□□□ -0.74
CPEB4-201ENST00000265085 PLCD3Q8N3E9 789 aa10.42□□□□□ -0.74
CPEB4-201ENST00000265085 GZF1Q9H116 711 aaPredicted RBP10.42□□□□□ -0.74
CPEB4-201ENST00000265085 GPS2Q13227 327 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms