RNA–Protein interactions for RNA: ENST00000264235.12

GSK3B-201, Transcript of glycogen synthase kinase 3 beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GSK3B, Length 7,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3B-201ENST00000264235 PPM1GO15355 546 aaPredicted RBP20.65■□□□□ 0.9
GSK3B-201ENST00000264235 NCLP19338 710 aaKnown RBP20.63■□□□□ 0.89
GSK3B-201ENST00000264235 EIF5BO60841 1220 aaKnown RBP20.6■□□□□ 0.89
GSK3B-201ENST00000264235 ISY1Q9ULR0 285 aaKnown RBP20.59■□□□□ 0.89
GSK3B-201ENST00000264235 TMX4Q9H1E5 349 aaPredicted RBP20.52■□□□□ 0.88
GSK3B-201ENST00000264235 HNRNPUQ00839 825 aaKnown RBP eCLIP20.52■□□□□ 0.88
GSK3B-201ENST00000264235 TPRNQ4KMQ1 711 aa20.49■□□□□ 0.87
GSK3B-201ENST00000264235 CASC1Q6TDU7 716 aa20.49■□□□□ 0.87
GSK3B-201ENST00000264235 EIF4G2P78344 907 aaKnown RBP eCLIP20.49■□□□□ 0.87
GSK3B-201ENST00000264235 LAS1LQ9Y4W2 734 aaKnown RBP20.47■□□□□ 0.87
GSK3B-201ENST00000264235 PRM3Q9NNZ6 103 aa20.47■□□□□ 0.87
GSK3B-201ENST00000264235 CFAP53Q96M91 514 aa20.45■□□□□ 0.86
GSK3B-201ENST00000264235 AEBP2Q6ZN18 517 aaPredicted RBP20.45■□□□□ 0.86
GSK3B-201ENST00000264235 POGKQ9P215 609 aa20.45■□□□□ 0.86
GSK3B-201ENST00000264235 OS9Q13438 667 aaPredicted RBP20.44■□□□□ 0.86
GSK3B-201ENST00000264235 CCDC136Q96JN2 1154 aa20.43■□□□□ 0.86
GSK3B-201ENST00000264235 NAP1L2Q9ULW6 460 aaPredicted RBP20.43■□□□□ 0.86
GSK3B-201ENST00000264235 GTF3C3Q9Y5Q9 886 aa20.43■□□□□ 0.86
GSK3B-201ENST00000264235 CCDC9Q9Y3X0 531 aaKnown RBP20.43■□□□□ 0.86
GSK3B-201ENST00000264235 FGD1P98174 961 aa20.42■□□□□ 0.86
GSK3B-201ENST00000264235 CSRNP3Q8WYN3 585 aa20.42■□□□□ 0.86
GSK3B-201ENST00000264235 KRI1Q8N9T8 703 aaKnown RBP20.41■□□□□ 0.86
GSK3B-201ENST00000264235 MLECQ14165 292 aa20.4■□□□□ 0.86
GSK3B-201ENST00000264235 PLEKHD1A6NEE1 506 aa20.38■□□□□ 0.85
GSK3B-201ENST00000264235 RGL3Q3MIN7 710 aa20.38■□□□□ 0.85
GSK3B-201ENST00000264235 MTUS2Q5JR59 1369 aa20.37■□□□□ 0.85
GSK3B-201ENST00000264235 ERCC6Q03468 1493 aa20.35■□□□□ 0.85
GSK3B-201ENST00000264235 FKBP8Q14318 412 aa20.34■□□□□ 0.85
GSK3B-201ENST00000264235 FTSJ3Q8IY81 847 aaKnown RBP20.34■□□□□ 0.85
GSK3B-201ENST00000264235 GOLGA6L22H0YM25 854 aa20.33■□□□□ 0.85
GSK3B-201ENST00000264235 DDX10Q13206 875 aaKnown RBP20.33■□□□□ 0.84
GSK3B-201ENST00000264235 TRIM44Q96DX7 344 aaPredicted RBP20.33■□□□□ 0.84
GSK3B-201ENST00000264235 GLIPR1L2Q4G1C9 344 aa20.33■□□□□ 0.84
GSK3B-201ENST00000264235 KCNJ4P48050 445 aa20.32■□□□□ 0.84
GSK3B-201ENST00000264235 HDGFP51858 240 aaKnown RBP20.32■□□□□ 0.84
GSK3B-201ENST00000264235 G3V3G9 751 aa20.31■□□□□ 0.84
GSK3B-201ENST00000264235 DCAF8Q5TAQ9 597 aa20.31■□□□□ 0.84
GSK3B-201ENST00000264235 MAPK8IP3Q9UPT6 1336 aa20.31■□□□□ 0.84
GSK3B-201ENST00000264235 SOX12O15370 315 aa20.3■□□□□ 0.84
GSK3B-201ENST00000264235 MRS2Q9HD23 443 aa20.27■□□□□ 0.84
GSK3B-201ENST00000264235 BECN1Q14457 450 aa20.27■□□□□ 0.84
GSK3B-201ENST00000264235 PTMAP06454 111 aaKnown RBP20.27■□□□□ 0.84
GSK3B-201ENST00000264235 CDCA8Q53HL2 280 aa20.25■□□□□ 0.83
GSK3B-201ENST00000264235 SCRIBQ14160 1630 aa20.25■□□□□ 0.83
GSK3B-201ENST00000264235 KNSTRNQ9Y448 316 aa20.24■□□□□ 0.83
GSK3B-201ENST00000264235 NUDCQ9Y266 331 aa20.24■□□□□ 0.83
GSK3B-201ENST00000264235 NBR1Q14596 966 aa20.23■□□□□ 0.83
GSK3B-201ENST00000264235 ZNF330Q9Y3S2 320 aaPredicted RBP20.22■□□□□ 0.83
GSK3B-201ENST00000264235 DCAF8L1A6NGE4 600 aa20.22■□□□□ 0.83
GSK3B-201ENST00000264235 CSB-PGBD3P0DP91 1061 aa20.21■□□□□ 0.83
GSK3B-201ENST00000264235 RRP7BPQ9NSQ0 103 aa20.2■□□□□ 0.82
GSK3B-201ENST00000264235 GOLGA6L6A8MZA4 724 aa20.2■□□□□ 0.82
GSK3B-201ENST00000264235 DNTTIP2Q5QJE6 756 aaKnown RBP20.2■□□□□ 0.82
GSK3B-201ENST00000264235 NEUROD2Q15784 382 aa20.19■□□□□ 0.82
GSK3B-201ENST00000264235 PAK3O75914 559 aaPredicted RBP20.19■□□□□ 0.82
GSK3B-201ENST00000264235 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.18■□□□□ 0.82
GSK3B-201ENST00000264235 TNNT2P45379 298 aaPredicted RBP20.17■□□□□ 0.82
GSK3B-201ENST00000264235 PLCB2Q00722 1185 aa20.15■□□□□ 0.82
GSK3B-201ENST00000264235 PHF23Q9BUL5 403 aaPredicted RBP20.15■□□□□ 0.82
GSK3B-201ENST00000264235 PNNQ9H307 717 aaKnown RBP20.15■□□□□ 0.82
GSK3B-201ENST00000264235 U2SURPO15042 1029 aaKnown RBP20.14■□□□□ 0.81
GSK3B-201ENST00000264235 GNL2Q13823 731 aaKnown RBP20.13■□□□□ 0.81
GSK3B-201ENST00000264235 ANP32EQ9BTT0 268 aa20.1■□□□□ 0.81
GSK3B-201ENST00000264235 NRDCO43847 1150 aa20.08■□□□□ 0.81
GSK3B-201ENST00000264235 RTF1Q92541 710 aaKnown RBP20.08■□□□□ 0.81
GSK3B-201ENST00000264235 CFDP1Q9UEE9 299 aaPredicted RBP20.07■□□□□ 0.8
GSK3B-201ENST00000264235 KIAA2012Q0VF49 1180 aa20.07■□□□□ 0.8
GSK3B-201ENST00000264235 CHMP4BQ9H444 224 aaKnown RBP20.06■□□□□ 0.8
GSK3B-201ENST00000264235 SRPK2P78362 688 aaKnown RBP20.05■□□□□ 0.8
GSK3B-201ENST00000264235 GOLGA6L4A6NEF3 574 aa20.05■□□□□ 0.8
GSK3B-201ENST00000264235 MSH5O43196 834 aa20.04■□□□□ 0.8
GSK3B-201ENST00000264235 KANK1Q14678 1352 aa20.04■□□□□ 0.8
GSK3B-201ENST00000264235 DDRGK1Q96HY6 314 aa20.04■□□□□ 0.8
GSK3B-201ENST00000264235 MEX3CQ5U5Q3 659 aaKnown RBP20.03■□□□□ 0.8
GSK3B-201ENST00000264235 HIRIP3Q9BW71 556 aaPredicted RBP20.01■□□□□ 0.79
GSK3B-201ENST00000264235 L1TD1Q5T7N2 865 aaKnown RBP20.01■□□□□ 0.79
GSK3B-201ENST00000264235 RSF1Q96T23 1441 aaPredicted RBP20.01■□□□□ 0.79
GSK3B-201ENST00000264235 IRX6P78412 446 aaPredicted RBP20■□□□□ 0.79
GSK3B-201ENST00000264235 CHAF1AQ13111 956 aaPredicted RBP19.99■□□□□ 0.79
GSK3B-201ENST00000264235 TAF7LQ5H9L4 462 aa19.99■□□□□ 0.79
GSK3B-201ENST00000264235 FRAT1Q92837 279 aaPredicted RBP19.99■□□□□ 0.79
GSK3B-201ENST00000264235 SAFB2Q14151 953 aaKnown RBP eCLIP19.98■□□□□ 0.79
GSK3B-201ENST00000264235 GTF2E1P29083 439 aaPredicted RBP19.98■□□□□ 0.79
GSK3B-201ENST00000264235 CNKSR2Q8WXI2 1034 aa19.97■□□□□ 0.79
GSK3B-201ENST00000264235 NOC3LQ8WTT2 800 aaKnown RBP19.97■□□□□ 0.79
GSK3B-201ENST00000264235 CARD11Q9BXL7 1154 aa19.96■□□□□ 0.79
GSK3B-201ENST00000264235 SENP3-EIF4A1A0A087X0R7 540 aa19.95■□□□□ 0.78
GSK3B-201ENST00000264235 CHMP3Q9Y3E7 222 aa19.95■□□□□ 0.78
GSK3B-201ENST00000264235 GORABQ5T7V8 394 aa19.95■□□□□ 0.78
GSK3B-201ENST00000264235 HSP90AB1P08238 724 aaKnown RBP19.95■□□□□ 0.78
GSK3B-201ENST00000264235 AMER1Q5JTC6 1135 aaPredicted RBP19.94■□□□□ 0.78
GSK3B-201ENST00000264235 KLHL34Q8N239 644 aa19.94■□□□□ 0.78
GSK3B-201ENST00000264235 VPS53Q5VIR6 699 aa19.94■□□□□ 0.78
GSK3B-201ENST00000264235 PDE4CQ08493 712 aa19.94■□□□□ 0.78
GSK3B-201ENST00000264235 STK26Q9P289 416 aa19.93■□□□□ 0.78
GSK3B-201ENST00000264235 FRAT2O75474 233 aaPredicted RBP19.92■□□□□ 0.78
GSK3B-201ENST00000264235 MCCP23508 829 aa19.91■□□□□ 0.78
GSK3B-201ENST00000264235 MS4A1P11836 297 aa19.91■□□□□ 0.78
GSK3B-201ENST00000264235 ACIN1Q9UKV3 1341 aaKnown RBP19.9■□□□□ 0.78
GSK3B-201ENST00000264235 GGT6Q6P531 493 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms