RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 GOLGA6L6A8MZA4 724 aa21.66■■□□□ 1.06
USP13-201ENST00000263966 SALL2Q9Y467 1007 aaPredicted RBP21.66■■□□□ 1.06
USP13-201ENST00000263966 TNNT2P45379 298 aaPredicted RBP21.66■■□□□ 1.06
USP13-201ENST00000263966 CCDC136Q96JN2 1154 aa21.63■■□□□ 1.05
USP13-201ENST00000263966 FAM9BQ8IZU0 186 aa21.62■■□□□ 1.05
USP13-201ENST00000263966 CFAP53Q96M91 514 aa21.61■■□□□ 1.05
USP13-201ENST00000263966 TMX4Q9H1E5 349 aaPredicted RBP21.61■■□□□ 1.05
USP13-201ENST00000263966 HNRNPUQ00839 825 aaKnown RBP eCLIP21.61■■□□□ 1.05
USP13-201ENST00000263966 GTF3C3Q9Y5Q9 886 aa21.6■■□□□ 1.05
USP13-201ENST00000263966 LMOD2Q6P5Q4 547 aa21.59■■□□□ 1.05
USP13-201ENST00000263966 KDM2AQ9Y2K7 1162 aa21.57■■□□□ 1.04
USP13-201ENST00000263966 ACIN1Q9UKV3 1341 aaKnown RBP21.57■■□□□ 1.04
USP13-201ENST00000263966 NRDCO43847 1150 aa21.56■■□□□ 1.04
USP13-201ENST00000263966 FGD1P98174 961 aa21.55■■□□□ 1.04
USP13-201ENST00000263966 L1TD1Q5T7N2 865 aaKnown RBP21.54■■□□□ 1.04
USP13-201ENST00000263966 PTMAP06454 111 aaKnown RBP21.53■■□□□ 1.04
USP13-201ENST00000263966 CDCA8Q53HL2 280 aa21.53■■□□□ 1.04
USP13-201ENST00000263966 FTSJ3Q8IY81 847 aaKnown RBP21.5■■□□□ 1.03
USP13-201ENST00000263966 PRM3Q9NNZ6 103 aa21.5■■□□□ 1.03
USP13-201ENST00000263966 CHMP4BQ9H444 224 aaKnown RBP21.49■■□□□ 1.03
USP13-201ENST00000263966 DDRGK1Q96HY6 314 aa21.48■■□□□ 1.03
USP13-201ENST00000263966 OS9Q13438 667 aaPredicted RBP21.48■■□□□ 1.03
USP13-201ENST00000263966 DNTTIP2Q5QJE6 756 aaKnown RBP21.47■■□□□ 1.03
USP13-201ENST00000263966 KRI1Q8N9T8 703 aaKnown RBP21.47■■□□□ 1.03
USP13-201ENST00000263966 ISY1Q9ULR0 285 aaKnown RBP21.47■■□□□ 1.03
USP13-201ENST00000263966 PPM1GO15355 546 aaPredicted RBP21.46■■□□□ 1.03
USP13-201ENST00000263966 MTUS2Q5JR59 1369 aa21.45■■□□□ 1.02
USP13-201ENST00000263966 PNNQ9H307 717 aaKnown RBP21.45■■□□□ 1.02
USP13-201ENST00000263966 SCRIBQ14160 1630 aa21.44■■□□□ 1.02
USP13-201ENST00000263966 KIAA2012Q0VF49 1180 aa21.43■■□□□ 1.02
USP13-201ENST00000263966 HDGFP51858 240 aaKnown RBP21.43■■□□□ 1.02
USP13-201ENST00000263966 TRHP20396 242 aaPredicted RBP21.43■■□□□ 1.02
USP13-201ENST00000263966 KCNJ4P48050 445 aa21.42■■□□□ 1.02
USP13-201ENST00000263966 SENP3Q9H4L4 574 aaPredicted RBP21.42■■□□□ 1.02
USP13-201ENST00000263966 FKBP8Q14318 412 aa21.42■■□□□ 1.02
USP13-201ENST00000263966 NAP1L2Q9ULW6 460 aaPredicted RBP21.39■■□□□ 1.02
USP13-201ENST00000263966 MAPK8IP3Q9UPT6 1336 aa21.39■■□□□ 1.02
USP13-201ENST00000263966 CHIC2Q9UKJ5 165 aa21.39■■□□□ 1.01
USP13-201ENST00000263966 KCNH8Q96L42 1107 aa21.39■■□□□ 1.01
USP13-201ENST00000263966 CSRNP3Q8WYN3 585 aa21.39■■□□□ 1.01
USP13-201ENST00000263966 TAOK2Q9UL54 1235 aa21.38■■□□□ 1.01
USP13-201ENST00000263966 CHAF1AQ13111 956 aaPredicted RBP21.37■■□□□ 1.01
USP13-201ENST00000263966 POGKQ9P215 609 aa21.36■■□□□ 1.01
USP13-201ENST00000263966 NUDCQ9Y266 331 aa21.36■■□□□ 1.01
USP13-201ENST00000263966 KNSTRNQ9Y448 316 aa21.35■■□□□ 1.01
USP13-201ENST00000263966 NBR1Q14596 966 aa21.34■■□□□ 1.01
USP13-201ENST00000263966 MRS2Q9HD23 443 aa21.34■■□□□ 1.01
USP13-201ENST00000263966 LAS1LQ9Y4W2 734 aaKnown RBP21.32■■□□□ 1
USP13-201ENST00000263966 ERCC6Q03468 1493 aa21.31■■□□□ 1
USP13-201ENST00000263966 PLEKHD1A6NEE1 506 aa21.3■■□□□ 1
USP13-201ENST00000263966 GNL2Q13823 731 aaKnown RBP21.29■■□□□ 1
USP13-201ENST00000263966 TPRNQ4KMQ1 711 aa21.28■■□□□ 1
USP13-201ENST00000263966 RSF1Q96T23 1441 aaPredicted RBP21.28■■□□□ 1
USP13-201ENST00000263966 GOLGA6L4A6NEF3 574 aa21.27■■□□□ 1
USP13-201ENST00000263966 DDX10Q13206 875 aaKnown RBP21.27■□□□□ 0.99
USP13-201ENST00000263966 MS4A1P11836 297 aa21.26■□□□□ 0.99
USP13-201ENST00000263966 NOC3LQ8WTT2 800 aaKnown RBP21.25■□□□□ 0.99
USP13-201ENST00000263966 G3V3G9 751 aa21.24■□□□□ 0.99
USP13-201ENST00000263966 DCAF8Q5TAQ9 597 aa21.24■□□□□ 0.99
USP13-201ENST00000263966 MCCP23508 829 aa21.2■□□□□ 0.98
USP13-201ENST00000263966 KANK1Q14678 1352 aa21.2■□□□□ 0.98
USP13-201ENST00000263966 PLCB2Q00722 1185 aa21.19■□□□□ 0.98
USP13-201ENST00000263966 CFAP44Q96MT7 982 aa21.19■□□□□ 0.98
USP13-201ENST00000263966 KAT6BQ8WYB5 2073 aa21.14■□□□□ 0.97
USP13-201ENST00000263966 HSP90AB1P08238 724 aaKnown RBP21.13■□□□□ 0.97
USP13-201ENST00000263966 DCAF8L1A6NGE4 600 aa21.12■□□□□ 0.97
USP13-201ENST00000263966 RTF1Q92541 710 aaKnown RBP21.12■□□□□ 0.97
USP13-201ENST00000263966 RGL3Q3MIN7 710 aa21.11■□□□□ 0.97
USP13-201ENST00000263966 CCDC34Q96HJ3 373 aa21.11■□□□□ 0.97
USP13-201ENST00000263966 CHMP4AQ9BY43 222 aa21.09■□□□□ 0.97
USP13-201ENST00000263966 CCDC9Q9Y3X0 531 aaKnown RBP21.08■□□□□ 0.97
USP13-201ENST00000263966 DRC7Q8IY82 874 aa21.07■□□□□ 0.96
USP13-201ENST00000263966 KIAA1211Q6ZU35 1233 aa21.04■□□□□ 0.96
USP13-201ENST00000263966 CEP89Q96ST8 783 aa21.03■□□□□ 0.96
USP13-201ENST00000263966 U2SURPO15042 1029 aaKnown RBP21.02■□□□□ 0.96
USP13-201ENST00000263966 RB1CC1Q8TDY2 1594 aa21.01■□□□□ 0.95
USP13-201ENST00000263966 USP35Q9P2H5 1018 aa21.01■□□□□ 0.95
USP13-201ENST00000263966 CFDP1Q9UEE9 299 aaPredicted RBP21■□□□□ 0.95
USP13-201ENST00000263966 CSB-PGBD3P0DP91 1061 aa21■□□□□ 0.95
USP13-201ENST00000263966 A0A0U1RQG5 324 aaPredicted RBP21■□□□□ 0.95
USP13-201ENST00000263966 HTATSF1O43719 755 aaKnown RBP20.99■□□□□ 0.95
USP13-201ENST00000263966 RRP7BPQ9NSQ0 103 aa20.99■□□□□ 0.95
USP13-201ENST00000263966 NEUROD2Q15784 382 aa20.98■□□□□ 0.95
USP13-201ENST00000263966 CNKSR2Q8WXI2 1034 aa20.97■□□□□ 0.95
USP13-201ENST00000263966 GPATCH3Q96I76 525 aa20.97■□□□□ 0.95
USP13-201ENST00000263966 ERICH6BQ5W0A0 696 aa20.97■□□□□ 0.95
USP13-201ENST00000263966 TAF7LQ5H9L4 462 aa20.97■□□□□ 0.95
USP13-201ENST00000263966 PAK3O75914 559 aaPredicted RBP20.96■□□□□ 0.95
USP13-201ENST00000263966 GORABQ5T7V8 394 aa20.95■□□□□ 0.95
USP13-201ENST00000263966 TPM4P67936 248 aa20.95■□□□□ 0.94
USP13-201ENST00000263966 CLIP1P30622 1438 aa20.94■□□□□ 0.94
USP13-201ENST00000263966 ZNF330Q9Y3S2 320 aaPredicted RBP20.94■□□□□ 0.94
USP13-201ENST00000263966 SRPK2P78362 688 aaKnown RBP20.94■□□□□ 0.94
USP13-201ENST00000263966 CARD11Q9BXL7 1154 aa20.94■□□□□ 0.94
USP13-201ENST00000263966 HDAC5Q9UQL6 1122 aa20.93■□□□□ 0.94
USP13-201ENST00000263966 AEBP2Q6ZN18 517 aaPredicted RBP20.93■□□□□ 0.94
USP13-201ENST00000263966 CALD1Q05682 793 aaKnown RBP20.92■□□□□ 0.94
USP13-201ENST00000263966 MLECQ14165 292 aa20.92■□□□□ 0.94
USP13-201ENST00000263966 HSCBQ8IWL3 235 aa20.92■□□□□ 0.94
USP13-201ENST00000263966 FRAT1Q92837 279 aaPredicted RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms